RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 SUPT4H1P63272 117 aaKnown RBP11.07□□□□□ -0.64
VMP1-217ENST00000593168 GNMTQ14749 295 aa11.07□□□□□ -0.64
VMP1-217ENST00000593168 FCN2Q15485 313 aa11.07□□□□□ -0.64
VMP1-217ENST00000593168 HEPN1Q6WQI6 88 aa11.07□□□□□ -0.64
VMP1-217ENST00000593168 ZNF818PQ6ZRF7 136 aa11.07□□□□□ -0.64
VMP1-217ENST00000593168 AKAP14Q86UN6 197 aa11.07□□□□□ -0.64
VMP1-217ENST00000593168 CMTM1Q8IZ96 169 aa11.07□□□□□ -0.64
VMP1-217ENST00000593168 ZBTB34Q8NCN2 500 aa11.07□□□□□ -0.64
VMP1-217ENST00000593168 LY6G5BQ8NDX9 201 aa11.07□□□□□ -0.64
VMP1-217ENST00000593168 BVESQ8NE79 360 aa11.07□□□□□ -0.64
VMP1-217ENST00000593168 OR8U1Q8NH10 309 aa11.07□□□□□ -0.64
VMP1-217ENST00000593168 RTN4IP1Q8WWV3 396 aaPredicted RBP11.07□□□□□ -0.64
VMP1-217ENST00000593168 GALNT14Q96FL9 552 aa11.07□□□□□ -0.64
VMP1-217ENST00000593168 PARP12Q9H0J9 701 aaKnown RBP11.07□□□□□ -0.64
VMP1-217ENST00000593168 NAA60Q9H7X0 242 aa11.07□□□□□ -0.64
VMP1-217ENST00000593168 SHPKQ9UHJ6 478 aa11.07□□□□□ -0.64
VMP1-217ENST00000593168 KCNIP3Q9Y2W7 256 aa11.07□□□□□ -0.64
VMP1-217ENST00000593168 RBM7Q9Y580 266 aaKnown RBP11.07□□□□□ -0.64
VMP1-217ENST00000593168 CR1P17927 2039 aa11.07□□□□□ -0.64
VMP1-217ENST00000593168 IGHV3-43A0A0B4J1X8 118 aa11.06□□□□□ -0.64
VMP1-217ENST00000593168 TEX13DA0A0J9YY54 714 aaPredicted RBP11.06□□□□□ -0.64
VMP1-217ENST00000593168 RNF212BA8MTL3 300 aa11.06□□□□□ -0.64
VMP1-217ENST00000593168 HSD17B6O14756 317 aa11.06□□□□□ -0.64
VMP1-217ENST00000593168 MPPED1O15442 326 aa11.06□□□□□ -0.64
VMP1-217ENST00000593168 CCNKO75909 580 aa11.06□□□□□ -0.64
VMP1-217ENST00000593168 IGHV3-43DP0DP04 118 aa11.06□□□□□ -0.64
VMP1-217ENST00000593168 OMGP23515 440 aa11.06□□□□□ -0.64
VMP1-217ENST00000593168 S100GP29377 79 aa11.06□□□□□ -0.64
VMP1-217ENST00000593168 PPP1CCP36873 323 aaKnown RBP11.06□□□□□ -0.64
VMP1-217ENST00000593168 DSCR9P59020 149 aa11.06□□□□□ -0.64
VMP1-217ENST00000593168 GNB2P62879 340 aa11.06□□□□□ -0.64
VMP1-217ENST00000593168 LTC4SQ16873 150 aa11.06□□□□□ -0.64
VMP1-217ENST00000593168 Q3ZCU0 254 aa11.06□□□□□ -0.64
VMP1-217ENST00000593168 PHLDA2Q53GA4 152 aa11.06□□□□□ -0.64
VMP1-217ENST00000593168 KCTD9Q7L273 389 aa11.06□□□□□ -0.64
VMP1-217ENST00000593168 MAPK1IP1LQ8NDC0 245 aa11.06□□□□□ -0.64
VMP1-217ENST00000593168 OR2AK2Q8NG84 335 aa11.06□□□□□ -0.64
VMP1-217ENST00000593168 RAB39BQ96DA2 213 aa11.06□□□□□ -0.64
VMP1-217ENST00000593168 DMRTB1Q96MA1 342 aa11.06□□□□□ -0.64
VMP1-217ENST00000593168 PHB2Q99623 299 aa11.06□□□□□ -0.64
VMP1-217ENST00000593168 BPESC1Q9GZL8 116 aa11.06□□□□□ -0.64
VMP1-217ENST00000593168 RPUSD1Q9UJJ7 312 aaKnown RBP11.06□□□□□ -0.64
VMP1-217ENST00000593168 GAB2Q9UQC2 676 aa11.06□□□□□ -0.64
VMP1-217ENST00000593168 SONP18583 2426 aaKnown RBP11.06□□□□□ -0.64
VMP1-217ENST00000593168 C17orf98A8MV24 154 aa11.05□□□□□ -0.64
VMP1-217ENST00000593168 PGLYRP1O75594 196 aaPredicted RBP11.05□□□□□ -0.64
VMP1-217ENST00000593168 IFNA2P01563 188 aa11.05□□□□□ -0.64
VMP1-217ENST00000593168 IGLV2-14P01704 120 aa11.05□□□□□ -0.64
VMP1-217ENST00000593168 ANXA3P12429 323 aa11.05□□□□□ -0.64
VMP1-217ENST00000593168 CCL3L1P16619 93 aa11.05□□□□□ -0.64
VMP1-217ENST00000593168 HLA-GP17693 338 aa11.05□□□□□ -0.64
VMP1-217ENST00000593168 CD34P28906 385 aa11.05□□□□□ -0.64
VMP1-217ENST00000593168 ESCO2Q56NI9 601 aa11.05□□□□□ -0.64
VMP1-217ENST00000593168 FAM53AQ6NSI3 398 aaPredicted RBP11.05□□□□□ -0.64
VMP1-217ENST00000593168 ZNF645Q8N7E2 425 aa11.05□□□□□ -0.64
VMP1-217ENST00000593168 OR11H7Q8NGC8 314 aa11.05□□□□□ -0.64
VMP1-217ENST00000593168 COQ8AQ8NI60 647 aa11.05□□□□□ -0.64
VMP1-217ENST00000593168 C10orf105Q8TEF2 133 aa11.05□□□□□ -0.64
VMP1-217ENST00000593168 FAM168AQ92567 244 aa11.05□□□□□ -0.64
VMP1-217ENST00000593168 ST6GAL2Q96JF0 529 aa11.05□□□□□ -0.64
VMP1-217ENST00000593168 AGMATQ9BSE5 352 aa11.05□□□□□ -0.64
VMP1-217ENST00000593168 PIMREGQ9BSJ6 248 aa11.05□□□□□ -0.64
VMP1-217ENST00000593168 SSBP3Q9BWW4 388 aaPredicted RBP11.05□□□□□ -0.64
VMP1-217ENST00000593168 ANK2Q01484 3957 aa11.04□□□□□ -0.64
VMP1-217ENST00000593168 PPIAL4CA0A0B4J2A2 164 aa11.04□□□□□ -0.64
VMP1-217ENST00000593168 DBX1A6NMT0 343 aa11.04□□□□□ -0.64
VMP1-217ENST00000593168 VWC2LB2RUY7 222 aa11.04□□□□□ -0.64
VMP1-217ENST00000593168 B3GALNT1O75752 331 aa11.04□□□□□ -0.64
VMP1-217ENST00000593168 MMP23AO75900 390 aa11.04□□□□□ -0.64
VMP1-217ENST00000593168 IGHV2-5P01817 119 aa11.04□□□□□ -0.64
VMP1-217ENST00000593168 RBP4P02753 201 aa11.04□□□□□ -0.64
VMP1-217ENST00000593168 PPIAL4GP0DN37 164 aa11.04□□□□□ -0.64
VMP1-217ENST00000593168 NFYBP25208 207 aa11.04□□□□□ -0.64
VMP1-217ENST00000593168 RAB7AP51149 207 aa11.04□□□□□ -0.64
VMP1-217ENST00000593168 PRAMEF5Q5TYX0 476 aa11.04□□□□□ -0.64
VMP1-217ENST00000593168 CLEC2AQ6UVW9 174 aa11.04□□□□□ -0.64
VMP1-217ENST00000593168 TBC1D26Q86UD7 250 aa11.04□□□□□ -0.64
VMP1-217ENST00000593168 C11orf42Q8N5U0 333 aa11.04□□□□□ -0.64
VMP1-217ENST00000593168 DRAM1Q8N682 238 aa11.04□□□□□ -0.64
VMP1-217ENST00000593168 UXS1Q8NBZ7 420 aa11.04□□□□□ -0.64
VMP1-217ENST00000593168 ZNF439Q8NDP4 499 aa11.04□□□□□ -0.64
VMP1-217ENST00000593168 CASTOR1Q8WTX7 329 aa11.04□□□□□ -0.64
VMP1-217ENST00000593168 SUCNR1Q9BXA5 334 aa11.04□□□□□ -0.64
VMP1-217ENST00000593168 MGAT4CQ9UBM8 478 aa11.04□□□□□ -0.64
VMP1-217ENST00000593168 RNF150Q9ULK6 438 aa11.04□□□□□ -0.64
VMP1-217ENST00000593168 YLPM1P49750 1951 aaKnown RBP11.03□□□□□ -0.64
VMP1-217ENST00000593168 LOC105371242A0A075B767 164 aa11.03□□□□□ -0.64
VMP1-217ENST00000593168 A0A087X0M5 115 aa11.03□□□□□ -0.64
VMP1-217ENST00000593168 C3orf85A0A1B0GTC6 90 aa11.03□□□□□ -0.64
VMP1-217ENST00000593168 A0A1B0GX30 115 aa11.03□□□□□ -0.64
VMP1-217ENST00000593168 C22orf46C9J442 243 aa11.03□□□□□ -0.64
VMP1-217ENST00000593168 ST8SIA5O15466 376 aa11.03□□□□□ -0.64
VMP1-217ENST00000593168 LIPFP07098 398 aa11.03□□□□□ -0.64
VMP1-217ENST00000593168 CXCL3P19876 107 aa11.03□□□□□ -0.64
VMP1-217ENST00000593168 ZNF134P52741 427 aa11.03□□□□□ -0.64
VMP1-217ENST00000593168 LMO4P61968 165 aa11.03□□□□□ -0.64
VMP1-217ENST00000593168 TMEM187Q14656 261 aa11.03□□□□□ -0.64
VMP1-217ENST00000593168 SLC9A3R2Q15599 337 aa11.03□□□□□ -0.64
VMP1-217ENST00000593168 CT45A1Q5HYN5 189 aa11.03□□□□□ -0.64
VMP1-217ENST00000593168 LRTM2Q8N967 370 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms