RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 BLOC1S6Q9UL45 172 aa5.97□□□□□ -1.45
VMP1-213ENST00000591877 RPL36Q9Y3U8 105 aaKnown RBP5.97□□□□□ -1.45
VMP1-213ENST00000591877 HILPDAQ9Y5L2 63 aa5.97□□□□□ -1.45
VMP1-213ENST00000591877 A0A087WXM4 84 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 FAM172BPA6NC97 362 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 GABRPO00591 440 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 LALBAP00709 142 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 IGLV1-47P01700 117 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 CSN2P05814 226 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 HCKP08631 526 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 CCDC159P0C7I6 412 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 ZNF44P15621 663 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 CDK2P24941 298 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 RPL5P46777 297 aaKnown RBP5.96□□□□□ -1.46
VMP1-213ENST00000591877 GBX2P52951 348 aaPredicted RBP5.96□□□□□ -1.46
VMP1-213ENST00000591877 GABARAPL2P60520 117 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 BLCAPP62952 87 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 MRPL28Q13084 256 aaKnown RBP5.96□□□□□ -1.46
VMP1-213ENST00000591877 KLHL22Q53GT1 634 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 MINOS1Q5TGZ0 78 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 PRAMEF5Q5TYX0 476 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 ELP2Q6IA86 826 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 KRTAP5-11Q6L8G4 156 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 HEPN1Q6WQI6 88 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 ASCL4Q6XD76 172 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 TMEM182Q6ZP80 229 aaPredicted RBP5.96□□□□□ -1.46
VMP1-213ENST00000591877 TRAPPC6BQ86SZ2 158 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 FAM219AQ8IW50 185 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 PRR26Q8N8Z3 221 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 OR5D14Q8NGL3 314 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 OR2T6Q8NHC8 308 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 CNIH3Q8TBE1 160 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 MRPL48Q96GC5 212 aaKnown RBP5.96□□□□□ -1.46
VMP1-213ENST00000591877 CDCA4Q9BXL8 241 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 CLEC7AQ9BXN2 247 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 FAM192AQ9GZU8 254 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 RHOFQ9HBH0 211 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 ZNF286AQ9HBT8 521 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 NEK6Q9HC98 313 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 RAB18Q9NP72 206 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 TAS2R3Q9NYW6 316 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 NDUFA13Q9P0J0 144 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 ZNF581Q9P0T4 197 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 GLS2Q9UI32 602 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 MINOS1-NBL1R4GNA1 71 aa5.96□□□□□ -1.46
VMP1-213ENST00000591877 IGLV5-52A0A0A0MRZ9 124 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 TRGV10A0A0A0MS01 117 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 TRAV24A0A0B4J272 114 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 SMIM31A0A1B0GVY4 71 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 ODAMA1E959 279 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 FAM90A10PA6NDY2 464 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 LY6LH3BQJ8 138 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 DEGS1O15121 323 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 MRPS14O60783 128 aaKnown RBP5.95□□□□□ -1.46
VMP1-213ENST00000591877 OCM2P0CE71 109 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 OCMP0CE72 109 aaPredicted RBP5.95□□□□□ -1.46
VMP1-213ENST00000591877 FAM106CPP0CH98 169 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 SPP1P10451 314 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 CD28P10747 220 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 CD24P25063 80 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 HTR1DP28221 377 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 CD34P28906 385 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 BDH1Q02338 343 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 ATXN7L3Q14CW9 347 aaPredicted RBP5.95□□□□□ -1.46
VMP1-213ENST00000591877 CCDC58Q4VC31 144 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 LAIR2Q6ISS4 152 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 RPL22L1Q6P5R6 122 aaKnown RBP5.95□□□□□ -1.46
VMP1-213ENST00000591877 LYG1Q8N1E2 194 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 ABHD12Q8N2K0 398 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 CHST4Q8NCG5 386 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 ZNF485Q8NCK3 441 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 PXT1Q8NFP0 134 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 OR51T1Q8NGJ9 327 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 OR13C5Q8NGS8 318 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 OR10K1Q8NGX5 313 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 NDNFQ8TB73 568 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 PLPPR1Q8TBJ4 325 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 TSEN15Q8WW01 171 aaKnown RBP5.95□□□□□ -1.46
VMP1-213ENST00000591877 ST6GALNAC6Q969X2 333 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 PHF21AQ96BD5 680 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 MYCBPQ99417 103 aaPredicted RBP5.95□□□□□ -1.46
VMP1-213ENST00000591877 ABCB10Q9NRK6 738 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 TAS2R4Q9NYW5 299 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 CLEC2DQ9UHP7 191 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 RNF150Q9ULK6 438 aa5.95□□□□□ -1.46
VMP1-213ENST00000591877 TRBV5-5A0A0J9YX44 114 aa5.94□□□□□ -1.46
VMP1-213ENST00000591877 FUOMA2VDF0 154 aa5.94□□□□□ -1.46
VMP1-213ENST00000591877 ZNF729A6NN14 1252 aaPredicted RBP5.94□□□□□ -1.46
VMP1-213ENST00000591877 BUB1B-PAK6H3BSN5 160 aa5.94□□□□□ -1.46
VMP1-213ENST00000591877 CDRT1O95170 752 aa5.94□□□□□ -1.46
VMP1-213ENST00000591877 ALDOBP05062 364 aa5.94□□□□□ -1.46
VMP1-213ENST00000591877 TFAP2AP05549 437 aa5.94□□□□□ -1.46
VMP1-213ENST00000591877 PSG1P11464 419 aa5.94□□□□□ -1.46
VMP1-213ENST00000591877 IGFBP3P17936 291 aaPredicted RBP5.94□□□□□ -1.46
VMP1-213ENST00000591877 RAB3AP20336 220 aa5.94□□□□□ -1.46
VMP1-213ENST00000591877 CRHBPP24387 322 aa5.94□□□□□ -1.46
VMP1-213ENST00000591877 DCKP27707 260 aa5.94□□□□□ -1.46
VMP1-213ENST00000591877 OR3A4PP47883 348 aa5.94□□□□□ -1.46
VMP1-213ENST00000591877 ALDH3B2P48448 385 aa5.94□□□□□ -1.46
VMP1-213ENST00000591877 RPS11P62280 158 aaKnown RBP eCLIP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms