RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 EXT1Q16394 746 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 KCNMB1Q16558 191 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 TAF9Q16594 264 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 IQCJQ1A5X6 159 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 ACOT6Q3I5F7 207 aaPredicted RBP3.52□□□□□ -1.85
LIG3-211ENST00000588713 ANKRD39Q53RE8 183 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 PLAC9Q5JTB6 97 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 SPSB3Q6PJ21 355 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 GLIPR1L1Q6UWM5 242 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 DGAT2L6Q6ZPD8 337 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 DOK3Q7L591 496 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 PRSS41Q7RTY9 318 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 ZNF429Q86V71 674 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 LSRQ86X29 649 aaPredicted RBP3.52□□□□□ -1.85
LIG3-211ENST00000588713 OR5AS1Q8N127 324 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 LGI3Q8N145 548 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 ZNF283Q8N7M2 679 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 CYB561D1Q8N8Q1 229 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 CCDC71LQ8N9Z2 235 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 TMEM104Q8NE00 496 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 CSNK2A3Q8NEV1 391 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 OR2M7Q8NG81 312 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 OR5D14Q8NGL3 314 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 OR4D5Q8NGN0 318 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 OR1P1Q8NH06 330 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 CLDND2Q8NHS1 167 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 TAAR8Q969N4 342 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 SLC25A36Q96CQ1 311 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 SLAMF6Q96DU3 332 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 ADAT3Q96EY9 351 aaPredicted RBP3.52□□□□□ -1.85
LIG3-211ENST00000588713 MISP3Q96FF7 219 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 PLPPR2Q96GM1 343 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 BTF3L4Q96K17 158 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 SNX22Q96L94 193 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 DUX5Q96PT3 197 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 P2RX4Q99571 388 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 NKX3-1Q99801 234 aaPredicted RBP3.52□□□□□ -1.85
LIG3-211ENST00000588713 AGMATQ9BSE5 352 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 NICN1Q9BSH3 213 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 PECRQ9BY49 303 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 SMIM3Q9BZL3 60 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 PBOV1Q9GZY1 135 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 OR10A5Q9H207 317 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 SH3BGRL3Q9H299 93 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 C12orf49Q9H741 205 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 SRD5A3Q9H8P0 318 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 GPR84Q9NQS5 396 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 PRTFDC1Q9NRG1 225 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 PRR13Q9NZ81 148 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 GSKIPQ9P0R6 139 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 KLHL13Q9P2N7 655 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 RCL1Q9Y2P8 373 aaKnown RBP3.52□□□□□ -1.85
LIG3-211ENST00000588713 PPIAL4AQ9Y536 164 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 WSB1Q9Y6I7 421 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 EML6Q6ZMW3 1958 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 ABCA13Q86UQ4 5058 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 MED12Q93074 2177 aa3.52□□□□□ -1.85
LIG3-211ENST00000588713 KIAA1109Q2LD37 5005 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 IGLV3-12A0A075B6K2 115 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 A0A087WZY1 265 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 TGIF2-C20orf24A0A0A6YYL0 155 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 TMEM238LA0A1B0GVL6 79 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 TMEM210A6NLX4 147 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 TRDCB7Z8K6 153 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 ALG1L2C9J202 215 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 C11orf98E9PRG8 122 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 M0R143 59 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 PLPP3O14495 311 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 GEMIN2O14893 280 aaKnown RBP3.51□□□□□ -1.85
LIG3-211ENST00000588713 SOCS1O15524 211 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 DLEU1O43261 78 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 HCRTR2O43614 444 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 CRTAPO75718 401 aaPredicted RBP3.51□□□□□ -1.85
LIG3-211ENST00000588713 RAD51DO75771 328 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 UTS2O95399 124 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 NSA2O95478 260 aaKnown RBP3.51□□□□□ -1.85
LIG3-211ENST00000588713 IL18BPO95998 194 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 IGLV3-1P01715 115 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 AMBPP02760 352 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 TK1P04183 234 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 QDPRP09417 244 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 BCL2P10415 239 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 PI3P19957 117 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 FUT3P21217 361 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 MDKP21741 143 aaPredicted RBP3.51□□□□□ -1.85
LIG3-211ENST00000588713 ATP6V0CP27449 155 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 OR3A4PP47883 348 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 CSNK1A1P48729 337 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 SUMO3P55854 103 aaPredicted RBP3.51□□□□□ -1.85
LIG3-211ENST00000588713 UCP3P55916 312 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 HSD17B7P56937 341 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 FAM3BP58499 235 aaPredicted RBP3.51□□□□□ -1.85
LIG3-211ENST00000588713 RND3P61587 244 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 GNMTQ14749 295 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 OR8B8Q15620 311 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 NNATQ16517 81 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 PRTGQ2VWP7 1150 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 CASC10Q5T4H9 136 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 GFI1BQ5VTD9 330 aa3.51□□□□□ -1.85
LIG3-211ENST00000588713 FAM90A2PQ658T7 463 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms