RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 ACTBP60709 375 aa13.93□□□□□ -0.18
TPM4-206ENST00000587201 MRPS15P82914 257 aaKnown RBP13.93□□□□□ -0.18
TPM4-206ENST00000587201 PNLIPRP3Q17RR3 467 aa13.93□□□□□ -0.18
TPM4-206ENST00000587201 PLAC9Q5JTB6 97 aa13.93□□□□□ -0.18
TPM4-206ENST00000587201 UBE2UQ5VVX9 321 aa13.93□□□□□ -0.18
TPM4-206ENST00000587201 C22orf42Q6IC83 251 aa13.93□□□□□ -0.18
TPM4-206ENST00000587201 TEX38Q6PEX7 206 aa13.93□□□□□ -0.18
TPM4-206ENST00000587201 C18orf65Q6ZTR6 163 aa13.93□□□□□ -0.18
TPM4-206ENST00000587201 SPARTQ8N0X7 666 aa13.93□□□□□ -0.18
TPM4-206ENST00000587201 OR1A1Q9P1Q5 309 aa13.93□□□□□ -0.18
TPM4-206ENST00000587201 IFITM5A6NNB3 132 aa13.92□□□□□ -0.18
TPM4-206ENST00000587201 SCTP09683 121 aa13.92□□□□□ -0.18
TPM4-206ENST00000587201 GALP22466 123 aa13.92□□□□□ -0.18
TPM4-206ENST00000587201 RPL39P5Q59GN2 51 aa13.92□□□□□ -0.18
TPM4-206ENST00000587201 FAM71F2Q6NXP2 309 aa13.92□□□□□ -0.18
TPM4-206ENST00000587201 C8orf86Q6ZUL3 223 aa13.92□□□□□ -0.18
TPM4-206ENST00000587201 REC114Q7Z4M0 266 aa13.92□□□□□ -0.18
TPM4-206ENST00000587201 EDARADDQ8WWZ3 215 aa13.92□□□□□ -0.18
TPM4-206ENST00000587201 RAB3CQ96E17 227 aa13.92□□□□□ -0.18
TPM4-206ENST00000587201 ABHD14BQ96IU4 210 aa13.92□□□□□ -0.18
TPM4-206ENST00000587201 RITA1Q96K30 269 aa13.92□□□□□ -0.18
TPM4-206ENST00000587201 YTHDF1Q9BYJ9 559 aaKnown RBP13.92□□□□□ -0.18
TPM4-206ENST00000587201 PARP12Q9H0J9 701 aaKnown RBP13.92□□□□□ -0.18
TPM4-206ENST00000587201 NECAP2Q9NVZ3 263 aa13.92□□□□□ -0.18
TPM4-206ENST00000587201 ZNF107Q9UII5 783 aaPredicted RBP13.92□□□□□ -0.18
TPM4-206ENST00000587201 ITGB1BP1O14713 200 aa13.91□□□□□ -0.18
TPM4-206ENST00000587201 CD3GP09693 182 aa13.91□□□□□ -0.18
TPM4-206ENST00000587201 VDAC1P21796 283 aa13.91□□□□□ -0.18
TPM4-206ENST00000587201 CNTFRP26992 372 aa13.91□□□□□ -0.18
TPM4-206ENST00000587201 KLHL30-AS1Q8NEE0 82 aa13.91□□□□□ -0.18
TPM4-206ENST00000587201 RCC1LQ96I51 464 aaKnown RBP13.91□□□□□ -0.18
TPM4-206ENST00000587201 GHITMQ9H3K2 345 aa13.91□□□□□ -0.18
TPM4-206ENST00000587201 KIAA1456Q9P272 454 aa13.91□□□□□ -0.18
TPM4-206ENST00000587201 TRDCB7Z8K6 153 aa13.9□□□□□ -0.18
TPM4-206ENST00000587201 NBR2O15453 112 aa13.9□□□□□ -0.18
TPM4-206ENST00000587201 GADD45AP24522 165 aa13.9□□□□□ -0.18
TPM4-206ENST00000587201 SLC6A1P30531 599 aa13.9□□□□□ -0.18
TPM4-206ENST00000587201 THBS3P49746 956 aa13.9□□□□□ -0.18
TPM4-206ENST00000587201 MOGAT2Q3SYC2 334 aa13.9□□□□□ -0.18
TPM4-206ENST00000587201 CXorf66Q5JRM2 361 aaPredicted RBP13.9□□□□□ -0.18
TPM4-206ENST00000587201 FOXB2Q5VYV0 432 aa13.9□□□□□ -0.18
TPM4-206ENST00000587201 FAM131AQ6UXB0 335 aa13.9□□□□□ -0.18
TPM4-206ENST00000587201 GLDNQ6ZMI3 551 aaPredicted RBP13.9□□□□□ -0.18
TPM4-206ENST00000587201 ETV3LQ6ZN32 361 aa13.9□□□□□ -0.18
TPM4-206ENST00000587201 ZNF695Q8IW36 515 aa13.9□□□□□ -0.18
TPM4-206ENST00000587201 LINC00482Q8N8I6 264 aa13.9□□□□□ -0.18
TPM4-206ENST00000587201 OR10R2Q8NGX6 335 aa13.9□□□□□ -0.18
TPM4-206ENST00000587201 FCGR1BQ92637 280 aa13.9□□□□□ -0.18
TPM4-206ENST00000587201 C11orf54Q9H0W9 315 aaPredicted RBP13.9□□□□□ -0.18
TPM4-206ENST00000587201 A0A075B6Q4 140 aa13.89□□□□□ -0.19
TPM4-206ENST00000587201 A0A0B4J203 849 aa13.89□□□□□ -0.19
TPM4-206ENST00000587201 SMIM30A4D0T7 59 aa13.89□□□□□ -0.19
TPM4-206ENST00000587201 DUS4LO95620 317 aaKnown RBP13.89□□□□□ -0.19
TPM4-206ENST00000587201 IGF1P05019 195 aa13.89□□□□□ -0.19
TPM4-206ENST00000587201 RPLP1P05386 114 aaKnown RBP13.89□□□□□ -0.19
TPM4-206ENST00000587201 ELANEP08246 267 aa13.89□□□□□ -0.19
TPM4-206ENST00000587201 CT45A6P0DMU7 189 aa13.89□□□□□ -0.19
TPM4-206ENST00000587201 CT45A5P0DMU8 189 aa13.89□□□□□ -0.19
TPM4-206ENST00000587201 CT45A7P0DMV0 189 aa13.89□□□□□ -0.19
TPM4-206ENST00000587201 RAB6AP20340 208 aa13.89□□□□□ -0.19
TPM4-206ENST00000587201 FOXE3Q13461 319 aa13.89□□□□□ -0.19
TPM4-206ENST00000587201 LCNL1Q6ZST4 164 aa13.89□□□□□ -0.19
TPM4-206ENST00000587201 MRPL41Q8IXM3 137 aaKnown RBP13.89□□□□□ -0.19
TPM4-206ENST00000587201 AGMATQ9BSE5 352 aa13.89□□□□□ -0.19
TPM4-206ENST00000587201 AURKAIP1Q9NWT8 199 aaPredicted RBP13.89□□□□□ -0.19
TPM4-206ENST00000587201 TXNL4BQ9NX01 149 aaKnown RBP13.89□□□□□ -0.19
TPM4-206ENST00000587201 RNF150Q9ULK6 438 aa13.89□□□□□ -0.19
TPM4-206ENST00000587201 STUB1Q9UNE7 303 aa13.89□□□□□ -0.19
TPM4-206ENST00000587201 KCNK7Q9Y2U2 307 aa13.89□□□□□ -0.19
TPM4-206ENST00000587201 IGKV1-6A0A0C4DH72 117 aa13.88□□□□□ -0.19
TPM4-206ENST00000587201 METTL21EPA6NDL7 271 aa13.88□□□□□ -0.19
TPM4-206ENST00000587201 OR5H14A6NHG9 310 aa13.88□□□□□ -0.19
TPM4-206ENST00000587201 HLA-DRB1P01911 266 aa13.88□□□□□ -0.19
TPM4-206ENST00000587201 OR5H8P0DN80 308 aa13.88□□□□□ -0.19
TPM4-206ENST00000587201 GNB3P16520 340 aa13.88□□□□□ -0.19
TPM4-206ENST00000587201 MC5RP33032 325 aa13.88□□□□□ -0.19
TPM4-206ENST00000587201 MYCNOSP40205 109 aa13.88□□□□□ -0.19
TPM4-206ENST00000587201 C5orf64Q2M2E5 130 aa13.88□□□□□ -0.19
TPM4-206ENST00000587201 LIN54Q6MZP7 749 aa13.88□□□□□ -0.19
TPM4-206ENST00000587201 NPBQ8NG41 125 aa13.88□□□□□ -0.19
TPM4-206ENST00000587201 OR4A4PQ8NGN8 299 aa13.88□□□□□ -0.19
TPM4-206ENST00000587201 MRAPQ8TCY5 172 aa13.88□□□□□ -0.19
TPM4-206ENST00000587201 PTX4Q96A99 478 aa13.88□□□□□ -0.19
TPM4-206ENST00000587201 KCTD7Q96MP8 289 aa13.88□□□□□ -0.19
TPM4-206ENST00000587201 PARP11Q9NR21 331 aa13.88□□□□□ -0.19
TPM4-206ENST00000587201 RDH8Q9NYR8 311 aa13.88□□□□□ -0.19
TPM4-206ENST00000587201 ZNF221Q9UK13 617 aa13.88□□□□□ -0.19
TPM4-206ENST00000587201 SSR3Q9UNL2 185 aa13.88□□□□□ -0.19
TPM4-206ENST00000587201 IGHV7-81A0A0B4J1V7 117 aa13.87□□□□□ -0.19
TPM4-206ENST00000587201 H0YJW9 148 aa13.87□□□□□ -0.19
TPM4-206ENST00000587201 H7C2Y5 167 aa13.87□□□□□ -0.19
TPM4-206ENST00000587201 RAB27BO00194 218 aa13.87□□□□□ -0.19
TPM4-206ENST00000587201 FABP7O15540 132 aa13.87□□□□□ -0.19
TPM4-206ENST00000587201 NDUFA3O95167 84 aa13.87□□□□□ -0.19
TPM4-206ENST00000587201 IGHG4P01861 327 aa13.87□□□□□ -0.19
TPM4-206ENST00000587201 FCGR3AP08637 254 aa13.87□□□□□ -0.19
TPM4-206ENST00000587201 GSTP1P09211 210 aaKnown RBP13.87□□□□□ -0.19
TPM4-206ENST00000587201 HIST1H1DP16402 221 aaKnown RBP13.87□□□□□ -0.19
TPM4-206ENST00000587201 FGF9P31371 208 aaPredicted RBP13.87□□□□□ -0.19
TPM4-206ENST00000587201 CFHR3Q02985 330 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms