RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 IFNA7P01567 189 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 CGB3P0DN86 165 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 CGB7P0DN87 165 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 LYL1P12980 280 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 MRPS11P82912 194 aaKnown RBP8.63□□□□□ -1.03
LIG3-203ENST00000585370 EDDM3AQ14507 147 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 SMCO1Q147U7 214 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 OPCMLQ14982 345 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 IAH1Q2TAA2 248 aaPredicted RBP8.63□□□□□ -1.03
LIG3-203ENST00000585370 HFEQ30201 348 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 SP6Q3SY56 376 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 ACOT7LQ6ZUV0 252 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 TMUB2Q71RG4 321 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 KRTAP1-3Q8IUG1 177 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 ZNF645Q8N7E2 425 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 ZNRF1Q8ND25 227 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 OR52M1Q8NGK5 317 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 CCL17Q92583 94 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 NEUROG1Q92886 237 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 ABHD14BQ96IU4 210 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 SMR3AQ99954 134 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 LINC00574Q9H8X3 128 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 CBLN4Q9NTU7 201 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 TAS2R3Q9NYW6 316 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 KAAG1Q9UBP8 84 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 GAB2Q9UQC2 676 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 FN1P02751 2386 aaKnown RBP8.63□□□□□ -1.03
LIG3-203ENST00000585370 CSPG4Q6UVK1 2322 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 KBTBD11-OT1A0A1B0GTJ5 212 aa8.62□□□□□ -1.03
LIG3-203ENST00000585370 hADV38S2A0JD32 116 aa8.62□□□□□ -1.03
LIG3-203ENST00000585370 TNFRSF13BO14836 293 aaPredicted RBP8.62□□□□□ -1.03
LIG3-203ENST00000585370 ARPC5O15511 151 aa8.62□□□□□ -1.03
LIG3-203ENST00000585370 SIAH2O43255 324 aa8.62□□□□□ -1.03
LIG3-203ENST00000585370 ATG12O94817 140 aa8.62□□□□□ -1.03
LIG3-203ENST00000585370 GYPAP02724 150 aa8.62□□□□□ -1.03
LIG3-203ENST00000585370 SERPINE2P07093 398 aa8.62□□□□□ -1.03
LIG3-203ENST00000585370 OR8U9P0C7N5 309 aa8.62□□□□□ -1.03
LIG3-203ENST00000585370 SLC25A6P12236 298 aa8.62□□□□□ -1.03
LIG3-203ENST00000585370 CXCL2P19875 107 aa8.62□□□□□ -1.03
LIG3-203ENST00000585370 VDAC1P21796 283 aa8.62□□□□□ -1.03
LIG3-203ENST00000585370 RAB7AP51149 207 aa8.62□□□□□ -1.03
LIG3-203ENST00000585370 EDDM3BP56851 147 aa8.62□□□□□ -1.03
LIG3-203ENST00000585370 CATR1Q13166 79 aa8.62□□□□□ -1.03
LIG3-203ENST00000585370 PRSS54Q6PEW0 395 aa8.62□□□□□ -1.03
LIG3-203ENST00000585370 ZNF66Q6ZN08 573 aa8.62□□□□□ -1.03
LIG3-203ENST00000585370 C5orf24Q7Z6I8 188 aa8.62□□□□□ -1.03
LIG3-203ENST00000585370 SELENOHQ8IZQ5 122 aaKnown RBP8.62□□□□□ -1.03
LIG3-203ENST00000585370 KCNRGQ8N5I3 272 aa8.62□□□□□ -1.03
LIG3-203ENST00000585370 DEFB108BQ8NET1 73 aa8.62□□□□□ -1.03
LIG3-203ENST00000585370 OR8U1Q8NH10 309 aa8.62□□□□□ -1.03
LIG3-203ENST00000585370 NEU4Q8WWR8 484 aaPredicted RBP8.62□□□□□ -1.03
LIG3-203ENST00000585370 RBPMSQ93062 196 aaKnown RBP8.62□□□□□ -1.03
LIG3-203ENST00000585370 OR10C1Q96KK4 312 aa8.62□□□□□ -1.03
LIG3-203ENST00000585370 TP53RKQ96S44 253 aa8.62□□□□□ -1.03
LIG3-203ENST00000585370 CCL13Q99616 98 aa8.62□□□□□ -1.03
LIG3-203ENST00000585370 LIN7CQ9NUP9 197 aaKnown RBP8.62□□□□□ -1.03
LIG3-203ENST00000585370 GSKIPQ9P0R6 139 aa8.62□□□□□ -1.03
LIG3-203ENST00000585370 CLN8Q9UBY8 286 aa8.62□□□□□ -1.03
LIG3-203ENST00000585370 TNFSF18Q9UNG2 199 aa8.62□□□□□ -1.03
LIG3-203ENST00000585370 CHD3Q12873 2000 aaKnown RBP8.62□□□□□ -1.03
LIG3-203ENST00000585370 GPR37O15354 613 aa8.61□□□□□ -1.03
LIG3-203ENST00000585370 NDUFB3O43676 98 aa8.61□□□□□ -1.03
LIG3-203ENST00000585370 Q3ZCU0 254 aa8.61□□□□□ -1.03
LIG3-203ENST00000585370 MORN2Q502X0 79 aa8.61□□□□□ -1.03
LIG3-203ENST00000585370 LRRC10Q5BKY1 277 aa8.61□□□□□ -1.03
LIG3-203ENST00000585370 FAM201AQ5SY85 155 aa8.61□□□□□ -1.03
LIG3-203ENST00000585370 TMEM268Q5VZI3 342 aa8.61□□□□□ -1.03
LIG3-203ENST00000585370 THOC7Q6I9Y2 204 aaKnown RBP8.61□□□□□ -1.03
LIG3-203ENST00000585370 Q71RC1 249 aaPredicted RBP8.61□□□□□ -1.03
LIG3-203ENST00000585370 LYZL2Q7Z4W2 148 aa8.61□□□□□ -1.03
LIG3-203ENST00000585370 SLC51BQ86UW2 128 aa8.61□□□□□ -1.03
LIG3-203ENST00000585370 ZCCHC24Q8N2G6 241 aaKnown RBP8.61□□□□□ -1.03
LIG3-203ENST00000585370 DRAM1Q8N682 238 aa8.61□□□□□ -1.03
LIG3-203ENST00000585370 OR8H1Q8NGG4 311 aa8.61□□□□□ -1.03
LIG3-203ENST00000585370 OR52L2PQ8NGH6 319 aa8.61□□□□□ -1.03
LIG3-203ENST00000585370 LSM10Q969L4 123 aaKnown RBP8.61□□□□□ -1.03
LIG3-203ENST00000585370 RAB39BQ96DA2 213 aa8.61□□□□□ -1.03
LIG3-203ENST00000585370 HSD17B10Q99714 261 aaKnown RBP8.61□□□□□ -1.03
LIG3-203ENST00000585370 RNF126Q9BV68 326 aa8.61□□□□□ -1.03
LIG3-203ENST00000585370 ARL6Q9H0F7 186 aa8.61□□□□□ -1.03
LIG3-203ENST00000585370 PLEKHA2Q9HB19 425 aa8.61□□□□□ -1.03
LIG3-203ENST00000585370 CALYQ9NYX4 217 aa8.61□□□□□ -1.03
LIG3-203ENST00000585370 GNG12Q9UBI6 72 aa8.61□□□□□ -1.03
LIG3-203ENST00000585370 SLC25A10Q9UBX3 287 aaPredicted RBP8.61□□□□□ -1.03
LIG3-203ENST00000585370 KCNS2Q9ULS6 477 aa8.61□□□□□ -1.03
LIG3-203ENST00000585370 LINC00312Q9Y6C7 94 aa8.61□□□□□ -1.03
LIG3-203ENST00000585370 DYSFO75923 2080 aa8.61□□□□□ -1.03
LIG3-203ENST00000585370 KANTRA0A1W2PQU2 76 aa8.6□□□□□ -1.03
LIG3-203ENST00000585370 TMPRSS2O15393 492 aa8.6□□□□□ -1.03
LIG3-203ENST00000585370 TSC22D2O75157 780 aa8.6□□□□□ -1.03
LIG3-203ENST00000585370 RP2O75695 350 aa8.6□□□□□ -1.03
LIG3-203ENST00000585370 TFF1P04155 84 aa8.6□□□□□ -1.03
LIG3-203ENST00000585370 SSTR5P35346 364 aa8.6□□□□□ -1.03
LIG3-203ENST00000585370 HOXA4Q00056 320 aaPredicted RBP8.6□□□□□ -1.03
LIG3-203ENST00000585370 LRRC37A5PQ49AS3 106 aa8.6□□□□□ -1.03
LIG3-203ENST00000585370 TEX261Q6UWH6 196 aa8.6□□□□□ -1.03
LIG3-203ENST00000585370 DTX2Q86UW9 622 aa8.6□□□□□ -1.03
LIG3-203ENST00000585370 TPRX1Q8N7U7 411 aa8.6□□□□□ -1.03
LIG3-203ENST00000585370 SLC35G3Q8N808 338 aa8.6□□□□□ -1.03
LIG3-203ENST00000585370 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms