RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 LY6G6FQ5SQ64 297 aa11.21□□□□□ -0.61
TRAF4-215ENST00000584944 UTF1Q5T230 341 aa11.21□□□□□ -0.61
TRAF4-215ENST00000584944 Q6ZPA2 131 aa11.21□□□□□ -0.61
TRAF4-215ENST00000584944 OR8H3Q8N146 312 aa11.21□□□□□ -0.61
TRAF4-215ENST00000584944 OR5AP2Q8NGF4 316 aa11.21□□□□□ -0.61
TRAF4-215ENST00000584944 OR8U1Q8NH10 309 aa11.21□□□□□ -0.61
TRAF4-215ENST00000584944 AKR1E2Q96JD6 320 aa11.21□□□□□ -0.61
TRAF4-215ENST00000584944 NXF2Q9GZY0 626 aaKnown RBP11.21□□□□□ -0.61
TRAF4-215ENST00000584944 C11orf54Q9H0W9 315 aaPredicted RBP11.21□□□□□ -0.61
TRAF4-215ENST00000584944 MEGF9Q9H1U4 602 aa11.21□□□□□ -0.61
TRAF4-215ENST00000584944 EHFQ9NZC4 300 aa11.21□□□□□ -0.61
TRAF4-215ENST00000584944 VPREB3Q9UKI3 123 aa11.21□□□□□ -0.61
TRAF4-215ENST00000584944 RNF150Q9ULK6 438 aa11.21□□□□□ -0.61
TRAF4-215ENST00000584944 ZNF736B4DX44 427 aaPredicted RBP11.2□□□□□ -0.62
TRAF4-215ENST00000584944 GABARAPH6UMI1 98 aa11.2□□□□□ -0.62
TRAF4-215ENST00000584944 CLDN34H7C241 214 aa11.2□□□□□ -0.62
TRAF4-215ENST00000584944 J3QRK9 145 aa11.2□□□□□ -0.62
TRAF4-215ENST00000584944 SLC31A2O15432 143 aa11.2□□□□□ -0.62
TRAF4-215ENST00000584944 OR5H8P0DN80 308 aa11.2□□□□□ -0.62
TRAF4-215ENST00000584944 PAX6P26367 422 aa11.2□□□□□ -0.62
TRAF4-215ENST00000584944 HLA-DMAP28067 261 aa11.2□□□□□ -0.62
TRAF4-215ENST00000584944 INPP1P49441 399 aa11.2□□□□□ -0.62
TRAF4-215ENST00000584944 LUMP51884 338 aaPredicted RBP11.2□□□□□ -0.62
TRAF4-215ENST00000584944 UBA52P62987 128 aaKnown RBP11.2□□□□□ -0.62
TRAF4-215ENST00000584944 CBX3Q13185 183 aa11.2□□□□□ -0.62
TRAF4-215ENST00000584944 ACTBL2Q562R1 376 aa11.2□□□□□ -0.62
TRAF4-215ENST00000584944 FAM53AQ6NSI3 398 aaPredicted RBP11.2□□□□□ -0.62
TRAF4-215ENST00000584944 TMEM17Q86X19 198 aa11.2□□□□□ -0.62
TRAF4-215ENST00000584944 ZNF439Q8NDP4 499 aa11.2□□□□□ -0.62
TRAF4-215ENST00000584944 GPX8Q8TED1 209 aa11.2□□□□□ -0.62
TRAF4-215ENST00000584944 OR2D2Q9H210 308 aa11.2□□□□□ -0.62
TRAF4-215ENST00000584944 PRDM13Q9H4Q3 707 aa11.2□□□□□ -0.62
TRAF4-215ENST00000584944 IGKV1D-8A0A087WSZ0 117 aa11.19□□□□□ -0.62
TRAF4-215ENST00000584944 IGKV1-6A0A0C4DH72 117 aa11.19□□□□□ -0.62
TRAF4-215ENST00000584944 VGLL3A8MV65 326 aa11.19□□□□□ -0.62
TRAF4-215ENST00000584944 ITGB1BP1O14713 200 aa11.19□□□□□ -0.62
TRAF4-215ENST00000584944 TIMM23O14925 209 aa11.19□□□□□ -0.62
TRAF4-215ENST00000584944 SLC22A5O76082 557 aa11.19□□□□□ -0.62
TRAF4-215ENST00000584944 VENTXO95231 258 aa11.19□□□□□ -0.62
TRAF4-215ENST00000584944 PMP2P02689 132 aa11.19□□□□□ -0.62
TRAF4-215ENST00000584944 NFYAP23511 347 aaPredicted RBP11.19□□□□□ -0.62
TRAF4-215ENST00000584944 FCGR2CP31995 323 aa11.19□□□□□ -0.62
TRAF4-215ENST00000584944 RAB13P51153 203 aa11.19□□□□□ -0.62
TRAF4-215ENST00000584944 ZNF134P52741 427 aa11.19□□□□□ -0.62
TRAF4-215ENST00000584944 HERPUD1Q15011 391 aa11.19□□□□□ -0.62
TRAF4-215ENST00000584944 ARSJQ5FYB0 599 aaPredicted RBP11.19□□□□□ -0.62
TRAF4-215ENST00000584944 RNASE10Q5GAN6 216 aaKnown RBP11.19□□□□□ -0.62
TRAF4-215ENST00000584944 FOXB2Q5VYV0 432 aa11.19□□□□□ -0.62
TRAF4-215ENST00000584944 DHRS7BQ6IAN0 325 aaPredicted RBP11.19□□□□□ -0.62
TRAF4-215ENST00000584944 C16orf87Q6PH81 154 aa11.19□□□□□ -0.62
TRAF4-215ENST00000584944 LIAT1Q6ZQX7 453 aa11.19□□□□□ -0.62
TRAF4-215ENST00000584944 H1FOOQ8IZA3 346 aaPredicted RBP11.19□□□□□ -0.62
TRAF4-215ENST00000584944 DRAM1Q8N682 238 aa11.19□□□□□ -0.62
TRAF4-215ENST00000584944 OR52I2Q8NH67 350 aa11.19□□□□□ -0.62
TRAF4-215ENST00000584944 OR56B4Q8NH76 319 aa11.19□□□□□ -0.62
TRAF4-215ENST00000584944 FAM216AQ8WUB2 273 aa11.19□□□□□ -0.62
TRAF4-215ENST00000584944 ZFAND2BQ8WV99 257 aa11.19□□□□□ -0.62
TRAF4-215ENST00000584944 RTN4IP1Q8WWV3 396 aaPredicted RBP11.19□□□□□ -0.62
TRAF4-215ENST00000584944 ABHD14BQ96IU4 210 aa11.19□□□□□ -0.62
TRAF4-215ENST00000584944 ABHD1Q96SE0 405 aa11.19□□□□□ -0.62
TRAF4-215ENST00000584944 CHIAQ9BZP6 476 aa11.19□□□□□ -0.62
TRAF4-215ENST00000584944 TAS2R8Q9NYW2 309 aa11.19□□□□□ -0.62
TRAF4-215ENST00000584944 OR2W1Q9Y3N9 320 aa11.19□□□□□ -0.62
TRAF4-215ENST00000584944 TENM1Q9UKZ4 2725 aa11.19□□□□□ -0.62
TRAF4-215ENST00000584944 SAA2-SAA4A0A096LPE2 208 aa11.18□□□□□ -0.62
TRAF4-215ENST00000584944 IGHV1-3A0A0C4DH29 117 aa11.18□□□□□ -0.62
TRAF4-215ENST00000584944 A6NHS1 94 aa11.18□□□□□ -0.62
TRAF4-215ENST00000584944 LY6LH3BQJ8 138 aa11.18□□□□□ -0.62
TRAF4-215ENST00000584944 LANCL1O43813 399 aa11.18□□□□□ -0.62
TRAF4-215ENST00000584944 RNASE1P07998 156 aaKnown RBP11.18□□□□□ -0.62
TRAF4-215ENST00000584944 CSF1P09603 554 aa11.18□□□□□ -0.62
TRAF4-215ENST00000584944 SAA2P0DJI9 122 aaPredicted RBP11.18□□□□□ -0.62
TRAF4-215ENST00000584944 TBPP20226 339 aa11.18□□□□□ -0.62
TRAF4-215ENST00000584944 S100GP29377 79 aa11.18□□□□□ -0.62
TRAF4-215ENST00000584944 HRH1P35367 487 aa11.18□□□□□ -0.62
TRAF4-215ENST00000584944 DYNLT3P51808 116 aa11.18□□□□□ -0.62
TRAF4-215ENST00000584944 TAS2R19P59542 299 aa11.18□□□□□ -0.62
TRAF4-215ENST00000584944 FXYD4P59646 89 aa11.18□□□□□ -0.62
TRAF4-215ENST00000584944 SSBP1Q04837 148 aaKnown RBP11.18□□□□□ -0.62
TRAF4-215ENST00000584944 ZNF816Q0VGE8 651 aaPredicted RBP11.18□□□□□ -0.62
TRAF4-215ENST00000584944 DYNAPQ8N1N2 210 aa11.18□□□□□ -0.62
TRAF4-215ENST00000584944 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.18□□□□□ -0.62
TRAF4-215ENST00000584944 OR6F1Q8NGZ6 308 aa11.18□□□□□ -0.62
TRAF4-215ENST00000584944 SMIM4Q8WVI0 70 aa11.18□□□□□ -0.62
TRAF4-215ENST00000584944 BORCS5Q969J3 196 aa11.18□□□□□ -0.62
TRAF4-215ENST00000584944 H7C2Y5 167 aa11.17□□□□□ -0.62
TRAF4-215ENST00000584944 M0R1X1 148 aa11.17□□□□□ -0.62
TRAF4-215ENST00000584944 APOA2P02652 100 aa11.17□□□□□ -0.62
TRAF4-215ENST00000584944 TMEM11P17152 192 aa11.17□□□□□ -0.62
TRAF4-215ENST00000584944 RFX2P48378 723 aa11.17□□□□□ -0.62
TRAF4-215ENST00000584944 AP3S2P59780 193 aa11.17□□□□□ -0.62
TRAF4-215ENST00000584944 DGCR2P98153 550 aa11.17□□□□□ -0.62
TRAF4-215ENST00000584944 CNPY1Q3B7I2 92 aa11.17□□□□□ -0.62
TRAF4-215ENST00000584944 FAM71F2Q6NXP2 309 aa11.17□□□□□ -0.62
TRAF4-215ENST00000584944 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.17□□□□□ -0.62
TRAF4-215ENST00000584944 ZDHHC22Q8N966 263 aa11.17□□□□□ -0.62
TRAF4-215ENST00000584944 SECTM1Q8WVN6 248 aa11.17□□□□□ -0.62
TRAF4-215ENST00000584944 SNAPC3Q92966 411 aa11.17□□□□□ -0.62
TRAF4-215ENST00000584944 AJUBAQ96IF1 538 aa11.17□□□□□ -0.62
TRAF4-215ENST00000584944 NPFFR1Q9GZQ6 430 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms