RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 PLPPR2Q96GM1 343 aa4.58□□□□□ -1.68
CRLF3-204ENST00000583527 AKR1E2Q96JD6 320 aa4.58□□□□□ -1.68
CRLF3-204ENST00000583527 SNX22Q96L94 193 aa4.58□□□□□ -1.68
CRLF3-204ENST00000583527 WFIKKN1Q96NZ8 548 aa4.58□□□□□ -1.68
CRLF3-204ENST00000583527 DIRC2Q96SL1 478 aa4.58□□□□□ -1.68
CRLF3-204ENST00000583527 SMIM3Q9BZL3 60 aa4.58□□□□□ -1.68
CRLF3-204ENST00000583527 TOLLIPQ9H0E2 274 aa4.58□□□□□ -1.68
CRLF3-204ENST00000583527 IFI27L2Q9H2X8 130 aa4.58□□□□□ -1.68
CRLF3-204ENST00000583527 C11orf1Q9H5F2 150 aa4.58□□□□□ -1.68
CRLF3-204ENST00000583527 PRORYQ9H606 182 aa4.58□□□□□ -1.68
CRLF3-204ENST00000583527 SAP30LQ9HAJ7 183 aa4.58□□□□□ -1.68
CRLF3-204ENST00000583527 PLEKHA2Q9HB19 425 aa4.58□□□□□ -1.68
CRLF3-204ENST00000583527 SEBOXQ9HB31 216 aaPredicted RBP4.58□□□□□ -1.68
CRLF3-204ENST00000583527 BARX1Q9HBU1 254 aaPredicted RBP4.58□□□□□ -1.68
CRLF3-204ENST00000583527 MED9Q9NWA0 146 aa4.58□□□□□ -1.68
CRLF3-204ENST00000583527 SDHAF2Q9NX18 166 aa4.58□□□□□ -1.68
CRLF3-204ENST00000583527 CALYQ9NYX4 217 aa4.58□□□□□ -1.68
CRLF3-204ENST00000583527 GNG12Q9UBI6 72 aa4.58□□□□□ -1.68
CRLF3-204ENST00000583527 IL19Q9UHD0 177 aa4.58□□□□□ -1.68
CRLF3-204ENST00000583527 PFDN2Q9UHV9 154 aa4.58□□□□□ -1.68
CRLF3-204ENST00000583527 ERRFI1Q9UJM3 462 aaPredicted RBP4.58□□□□□ -1.68
CRLF3-204ENST00000583527 PPP1R3CQ9UQK1 317 aa4.58□□□□□ -1.68
CRLF3-204ENST00000583527 RNF115Q9Y4L5 304 aa4.58□□□□□ -1.68
CRLF3-204ENST00000583527 RBM7Q9Y580 266 aaKnown RBP4.58□□□□□ -1.68
CRLF3-204ENST00000583527 MALRD1Q5VYJ5 2156 aa4.58□□□□□ -1.68
CRLF3-204ENST00000583527 CREBBPQ92793 2442 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 PIGBOS1A0A0B4J2F0 54 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 MFSD2BA6NFX1 497 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 LRRC30A6NM36 301 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 E7EQL1 145 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 I3L521 148 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 LGALS8O00214 317 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 F2RL2O00254 374 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 WRBO00258 174 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 CCL21O00585 134 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 TAAR5O14804 337 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 SIGLEC5O15389 551 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 S1PR2O95136 353 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 NXPH3O95157 252 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 LHBP01229 141 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 IGKV1-39P01597 117 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 GYPAP02724 150 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 IGKV1D-39P04432 117 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 CD3EP07766 207 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 SLC25A6P12236 298 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 ZNF16P17020 682 aaPredicted RBP4.57□□□□□ -1.68
CRLF3-204ENST00000583527 TNFRSF1AP19438 455 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 ZP3P21754 424 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 P2RY1P47900 373 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 ID4P47928 161 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 EDDM3BP56851 147 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 RPL30P62888 115 aaKnown RBP4.57□□□□□ -1.68
CRLF3-204ENST00000583527 EIF5AP63241 154 aaKnown RBP4.57□□□□□ -1.68
CRLF3-204ENST00000583527 CCL8P80075 99 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 HTD2P86397 168 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 EWSR1Q01844 656 aaKnown RBP eCLIP4.57□□□□□ -1.68
CRLF3-204ENST00000583527 EFNB3Q15768 340 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 TMEM30BQ3MIR4 351 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 PRAMEF5Q5TYX0 476 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 TEX36Q5VZQ5 186 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 RPL7L1Q6DKI1 246 aaKnown RBP4.57□□□□□ -1.68
CRLF3-204ENST00000583527 BTNL3Q6UXE8 466 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 ZNF788Q6ZQV5 615 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 BAP18Q8IXM2 172 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 PDZD9Q8IXQ8 264 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 ZNF295-AS1Q8N0V1 137 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 ZNF561Q8N587 486 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 ZBTB34Q8NCN2 500 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 ZNRF1Q8ND25 227 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 TCTEX1D2Q8WW35 142 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 EDARADDQ8WWZ3 215 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 LURAP1Q96LR2 239 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 MAGT1Q9H0U3 335 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 SLC25A32Q9H2D1 315 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 OR2S2Q9NQN1 319 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 OR6C3Q9NZP0 311 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 CACNG5Q9UF02 275 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 PSG11Q9UQ72 335 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 COL12A1Q99715 3063 aa4.57□□□□□ -1.68
CRLF3-204ENST00000583527 CACNA1BQ00975 2339 aa4.56□□□□□ -1.68
CRLF3-204ENST00000583527 WNK2Q9Y3S1 2297 aa4.56□□□□□ -1.68
CRLF3-204ENST00000583527 TRGV10A0A0A0MS01 117 aa4.56□□□□□ -1.68
CRLF3-204ENST00000583527 H3BP45 60 aa4.56□□□□□ -1.68
CRLF3-204ENST00000583527 M0R1X1 148 aa4.56□□□□□ -1.68
CRLF3-204ENST00000583527 SLC31A2O15432 143 aa4.56□□□□□ -1.68
CRLF3-204ENST00000583527 RAMP3O60896 148 aa4.56□□□□□ -1.68
CRLF3-204ENST00000583527 HEXAP06865 529 aa4.56□□□□□ -1.68
CRLF3-204ENST00000583527 P0C879 139 aa4.56□□□□□ -1.68
CRLF3-204ENST00000583527 MMP9P14780 707 aa4.56□□□□□ -1.68
CRLF3-204ENST00000583527 MUC1P15941 1255 aaPredicted RBP4.56□□□□□ -1.68
CRLF3-204ENST00000583527 PVALBP20472 110 aaPredicted RBP4.56□□□□□ -1.68
CRLF3-204ENST00000583527 LOXP28300 417 aaPredicted RBP4.56□□□□□ -1.68
CRLF3-204ENST00000583527 GPR12P47775 334 aa4.56□□□□□ -1.68
CRLF3-204ENST00000583527 CAV2P51636 162 aa4.56□□□□□ -1.68
CRLF3-204ENST00000583527 TMEM33P57088 247 aa4.56□□□□□ -1.68
CRLF3-204ENST00000583527 POLR2GP62487 172 aaKnown RBP eCLIP4.56□□□□□ -1.68
CRLF3-204ENST00000583527 VAMP2P63027 116 aa4.56□□□□□ -1.68
CRLF3-204ENST00000583527 BAXQ07812 192 aa4.56□□□□□ -1.68
CRLF3-204ENST00000583527 TMEM267Q0VDI3 215 aaPredicted RBP4.56□□□□□ -1.68
CRLF3-204ENST00000583527 LY6DQ14210 128 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms