RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 SETD2Q9BYW2 2564 aaPredicted RBP16.15■□□□□ 0.18
TOP3A-213ENST00000582230 GABARAPH6UMI1 98 aa16.15■□□□□ 0.18
TOP3A-213ENST00000582230 RBBP9O75884 186 aa16.15■□□□□ 0.18
TOP3A-213ENST00000582230 FCER2P06734 321 aa16.15■□□□□ 0.18
TOP3A-213ENST00000582230 ACTBP60709 375 aa16.15■□□□□ 0.18
TOP3A-213ENST00000582230 ACTG1P63261 375 aa16.15■□□□□ 0.18
TOP3A-213ENST00000582230 DIAPH2-AS1Q14236 149 aa16.15■□□□□ 0.18
TOP3A-213ENST00000582230 FAM71F2Q6NXP2 309 aa16.15■□□□□ 0.18
TOP3A-213ENST00000582230 C16orf87Q6PH81 154 aa16.15■□□□□ 0.18
TOP3A-213ENST00000582230 TGIF2LXQ8IUE1 241 aa16.15■□□□□ 0.18
TOP3A-213ENST00000582230 ODF3L1Q8IXM7 274 aa16.15■□□□□ 0.18
TOP3A-213ENST00000582230 OR52I2Q8NH67 350 aa16.15■□□□□ 0.18
TOP3A-213ENST00000582230 PIFOQ8TCI5 191 aa16.15■□□□□ 0.18
TOP3A-213ENST00000582230 RTN4IP1Q8WWV3 396 aaPredicted RBP16.15■□□□□ 0.18
TOP3A-213ENST00000582230 S1PR3Q99500 378 aa16.15■□□□□ 0.18
TOP3A-213ENST00000582230 CHIAQ9BZP6 476 aa16.15■□□□□ 0.18
TOP3A-213ENST00000582230 TNFRSF19Q9NS68 423 aa16.15■□□□□ 0.18
TOP3A-213ENST00000582230 MTFP1Q9UDX5 166 aa16.15■□□□□ 0.18
TOP3A-213ENST00000582230 ZNF221Q9UK13 617 aa16.15■□□□□ 0.18
TOP3A-213ENST00000582230 PITPNC1Q9UKF7 332 aa16.15■□□□□ 0.18
TOP3A-213ENST00000582230 IGHV1-3A0A0C4DH29 117 aa16.14■□□□□ 0.17
TOP3A-213ENST00000582230 A0A1W2PPI3 338 aa16.14■□□□□ 0.17
TOP3A-213ENST00000582230 OR3A3P47888 321 aa16.14■□□□□ 0.17
TOP3A-213ENST00000582230 RAB13P51153 203 aa16.14■□□□□ 0.17
TOP3A-213ENST00000582230 SSBP1Q04837 148 aaKnown RBP16.14■□□□□ 0.17
TOP3A-213ENST00000582230 CDK10Q15131 360 aa16.14■□□□□ 0.17
TOP3A-213ENST00000582230 FAM131AQ6UXB0 335 aa16.14■□□□□ 0.17
TOP3A-213ENST00000582230 LIAT1Q6ZQX7 453 aa16.14■□□□□ 0.17
TOP3A-213ENST00000582230 ZNF833PQ6ZTB9 187 aa16.14■□□□□ 0.17
TOP3A-213ENST00000582230 LYSMD2Q8IV50 215 aa16.14■□□□□ 0.17
TOP3A-213ENST00000582230 KLK11Q9UBX7 282 aa16.14■□□□□ 0.17
TOP3A-213ENST00000582230 OR2W1Q9Y3N9 320 aa16.14■□□□□ 0.17
TOP3A-213ENST00000582230 RBM7Q9Y580 266 aaKnown RBP16.14■□□□□ 0.17
TOP3A-213ENST00000582230 SAA2-SAA4A0A096LPE2 208 aa16.13■□□□□ 0.17
TOP3A-213ENST00000582230 TIMM23O14925 209 aa16.13■□□□□ 0.17
TOP3A-213ENST00000582230 OR8U9P0C7N5 309 aa16.13■□□□□ 0.17
TOP3A-213ENST00000582230 SAA2P0DJI9 122 aaPredicted RBP16.13■□□□□ 0.17
TOP3A-213ENST00000582230 OR5H8P0DN80 308 aa16.13■□□□□ 0.17
TOP3A-213ENST00000582230 NFYAP23511 347 aaPredicted RBP16.13■□□□□ 0.17
TOP3A-213ENST00000582230 PTBP1P26599 531 aaKnown RBP eCLIP16.13■□□□□ 0.17
TOP3A-213ENST00000582230 REG1BP48304 166 aa16.13■□□□□ 0.17
TOP3A-213ENST00000582230 RPL15P61313 204 aaKnown RBP16.13■□□□□ 0.17
TOP3A-213ENST00000582230 MOB3BQ86TA1 216 aa16.13■□□□□ 0.17
TOP3A-213ENST00000582230 CCDC190Q86UF4 302 aa16.13■□□□□ 0.17
TOP3A-213ENST00000582230 THNSL2Q86YJ6 484 aa16.13■□□□□ 0.17
TOP3A-213ENST00000582230 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.13■□□□□ 0.17
TOP3A-213ENST00000582230 OR6Q1Q8NGQ2 317 aa16.13■□□□□ 0.17
TOP3A-213ENST00000582230 OR5H2Q8NGV7 314 aa16.13■□□□□ 0.17
TOP3A-213ENST00000582230 OR8U1Q8NH10 309 aa16.13■□□□□ 0.17
TOP3A-213ENST00000582230 SMIM4Q8WVI0 70 aa16.13■□□□□ 0.17
TOP3A-213ENST00000582230 ABHD14BQ96IU4 210 aa16.13■□□□□ 0.17
TOP3A-213ENST00000582230 RNF150Q9ULK6 438 aa16.13■□□□□ 0.17
TOP3A-213ENST00000582230 GAB2Q9UQC2 676 aa16.13■□□□□ 0.17
TOP3A-213ENST00000582230 TUSC2O75896 110 aa16.12■□□□□ 0.17
TOP3A-213ENST00000582230 FAM106CPP0CH98 169 aa16.12■□□□□ 0.17
TOP3A-213ENST00000582230 GPR12P47775 334 aa16.12■□□□□ 0.17
TOP3A-213ENST00000582230 DGCR2P98153 550 aa16.12■□□□□ 0.17
TOP3A-213ENST00000582230 HABP2Q14520 560 aaPredicted RBP16.12■□□□□ 0.17
TOP3A-213ENST00000582230 RNASE12Q5GAN4 147 aaKnown RBP16.12■□□□□ 0.17
TOP3A-213ENST00000582230 SPANXN2Q5MJ10 180 aa16.12■□□□□ 0.17
TOP3A-213ENST00000582230 OVCH2Q7RTZ1 564 aa16.12■□□□□ 0.17
TOP3A-213ENST00000582230 DRAM1Q8N682 238 aa16.12■□□□□ 0.17
TOP3A-213ENST00000582230 GIMAP1Q8WWP7 306 aa16.12■□□□□ 0.17
TOP3A-213ENST00000582230 CFHR4Q92496 578 aa16.12■□□□□ 0.17
TOP3A-213ENST00000582230 RAB18Q9NP72 206 aa16.12■□□□□ 0.17
TOP3A-213ENST00000582230 ZNF107Q9UII5 783 aaPredicted RBP16.12■□□□□ 0.17
TOP3A-213ENST00000582230 TCF19Q9Y242 345 aa16.12■□□□□ 0.17
TOP3A-213ENST00000582230 FAM90A9PA6NNJ1 464 aa16.11■□□□□ 0.17
TOP3A-213ENST00000582230 GSTZ1O43708 216 aaPredicted RBP16.11■□□□□ 0.17
TOP3A-213ENST00000582230 GPR137BO60478 399 aa16.11■□□□□ 0.17
TOP3A-213ENST00000582230 PMP2P02689 132 aa16.11■□□□□ 0.17
TOP3A-213ENST00000582230 HLA-DMAP28067 261 aa16.11■□□□□ 0.17
TOP3A-213ENST00000582230 FCGR2CP31995 323 aa16.11■□□□□ 0.17
TOP3A-213ENST00000582230 ETV6P41212 452 aa16.11■□□□□ 0.17
TOP3A-213ENST00000582230 LUMP51884 338 aaPredicted RBP16.11■□□□□ 0.17
TOP3A-213ENST00000582230 SRSF2Q01130 221 aaKnown RBP16.11■□□□□ 0.17
TOP3A-213ENST00000582230 DYRK1AQ13627 763 aa16.11■□□□□ 0.17
TOP3A-213ENST00000582230 CNPY1Q3B7I2 92 aa16.11■□□□□ 0.17
TOP3A-213ENST00000582230 ACTBL2Q562R1 376 aa16.11■□□□□ 0.17
TOP3A-213ENST00000582230 OR56B4Q8NH76 319 aa16.11■□□□□ 0.17
TOP3A-213ENST00000582230 ZNF251Q9BRH9 671 aa16.11■□□□□ 0.17
TOP3A-213ENST00000582230 OR2D2Q9H210 308 aa16.11■□□□□ 0.17
TOP3A-213ENST00000582230 EHFQ9NZC4 300 aa16.11■□□□□ 0.17
TOP3A-213ENST00000582230 V9GYH0 126 aa16.11■□□□□ 0.17
TOP3A-213ENST00000582230 A6NDX4 124 aa16.1■□□□□ 0.17
TOP3A-213ENST00000582230 ZNF736B4DX44 427 aaPredicted RBP16.1■□□□□ 0.17
TOP3A-213ENST00000582230 SLC22A5O76082 557 aa16.1■□□□□ 0.17
TOP3A-213ENST00000582230 TBPP20226 339 aa16.1■□□□□ 0.17
TOP3A-213ENST00000582230 CD1BP29016 333 aa16.1■□□□□ 0.17
TOP3A-213ENST00000582230 HRH1P35367 487 aa16.1■□□□□ 0.17
TOP3A-213ENST00000582230 RFX2P48378 723 aa16.1■□□□□ 0.17
TOP3A-213ENST00000582230 LY6EQ16553 131 aa16.1■□□□□ 0.17
TOP3A-213ENST00000582230 RPL39P5Q59GN2 51 aa16.1■□□□□ 0.17
TOP3A-213ENST00000582230 DHRS11Q6UWP2 260 aa16.1■□□□□ 0.17
TOP3A-213ENST00000582230 CAPSLQ8WWF8 208 aa16.1■□□□□ 0.17
TOP3A-213ENST00000582230 TMEM158Q8WZ71 300 aa16.1■□□□□ 0.17
TOP3A-213ENST00000582230 TAS2R8Q9NYW2 309 aa16.1■□□□□ 0.17
TOP3A-213ENST00000582230 CRYBA1P05813 215 aa16.09■□□□□ 0.17
TOP3A-213ENST00000582230 TMEM229BQ8NBD8 167 aa16.09■□□□□ 0.17
TOP3A-213ENST00000582230 OR6F1Q8NGZ6 308 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms