RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 CCDC107Q8WV48 283 aa16.54■□□□□ 0.24
CCDC42-203ENST00000581598 ATG5Q9H1Y0 275 aa16.54■□□□□ 0.24
CCDC42-203ENST00000581598 IL3RAP26951 378 aa16.53■□□□□ 0.24
CCDC42-203ENST00000581598 TNFSF8P32971 234 aa16.53■□□□□ 0.24
CCDC42-203ENST00000581598 S100A5P33763 92 aa16.53■□□□□ 0.24
CCDC42-203ENST00000581598 ZNF137PP52743 207 aa16.53■□□□□ 0.24
CCDC42-203ENST00000581598 HNF4GQ14541 408 aa16.53■□□□□ 0.24
CCDC42-203ENST00000581598 KHDC1LQ5JSQ8 128 aa16.53■□□□□ 0.24
CCDC42-203ENST00000581598 C6orf183Q5T699 404 aa16.53■□□□□ 0.24
CCDC42-203ENST00000581598 SIGIRRQ6IA17 410 aa16.53■□□□□ 0.24
CCDC42-203ENST00000581598 RAB12Q6IQ22 244 aa16.53■□□□□ 0.24
CCDC42-203ENST00000581598 MOB3BQ86TA1 216 aa16.53■□□□□ 0.24
CCDC42-203ENST00000581598 CCDC190Q86UF4 302 aa16.53■□□□□ 0.24
CCDC42-203ENST00000581598 TGIF2LXQ8IUE1 241 aa16.53■□□□□ 0.24
CCDC42-203ENST00000581598 OR56B1Q8NGI3 324 aa16.53■□□□□ 0.24
CCDC42-203ENST00000581598 S100A16Q96FQ6 103 aaKnown RBP16.53■□□□□ 0.24
CCDC42-203ENST00000581598 EAF1Q96JC9 268 aaPredicted RBP16.53■□□□□ 0.24
CCDC42-203ENST00000581598 ZFP57Q9NU63 452 aa16.53■□□□□ 0.24
CCDC42-203ENST00000581598 ETAA1Q9NY74 926 aa16.53■□□□□ 0.24
CCDC42-203ENST00000581598 SERPINE3A8MV23 424 aa16.52■□□□□ 0.24
CCDC42-203ENST00000581598 C12orf77C9JDV5 145 aa16.52■□□□□ 0.24
CCDC42-203ENST00000581598 TXNL1O43396 289 aa16.52■□□□□ 0.24
CCDC42-203ENST00000581598 CD1BP29016 333 aa16.52■□□□□ 0.24
CCDC42-203ENST00000581598 ETV6P41212 452 aa16.52■□□□□ 0.24
CCDC42-203ENST00000581598 VEGFCP49767 419 aa16.52■□□□□ 0.24
CCDC42-203ENST00000581598 RPL23AP62750 156 aaKnown RBP16.52■□□□□ 0.24
CCDC42-203ENST00000581598 MOGAT2Q3SYC2 334 aa16.52■□□□□ 0.24
CCDC42-203ENST00000581598 CNIH2Q6PI25 160 aa16.52■□□□□ 0.24
CCDC42-203ENST00000581598 SLC25A48Q6ZT89 311 aaKnown RBP16.52■□□□□ 0.24
CCDC42-203ENST00000581598 SLC35E3Q7Z769 313 aa16.52■□□□□ 0.24
CCDC42-203ENST00000581598 ZNF329Q86UD4 541 aa16.52■□□□□ 0.24
CCDC42-203ENST00000581598 ZNF439Q8NDP4 499 aa16.52■□□□□ 0.24
CCDC42-203ENST00000581598 OR2T10Q8NGZ9 312 aa16.52■□□□□ 0.24
CCDC42-203ENST00000581598 RTN4IP1Q8WWV3 396 aaPredicted RBP16.52■□□□□ 0.24
CCDC42-203ENST00000581598 SOSTQ9BQB4 213 aa16.52■□□□□ 0.24
CCDC42-203ENST00000581598 LIN7CQ9NUP9 197 aaKnown RBP16.52■□□□□ 0.24
CCDC42-203ENST00000581598 TRAPPC2LQ9UL33 140 aa16.52■□□□□ 0.24
CCDC42-203ENST00000581598 DNAH3Q8TD57 4116 aa16.52■□□□□ 0.23
CCDC42-203ENST00000581598 FAM25AB3EWG3 89 aa16.51■□□□□ 0.23
CCDC42-203ENST00000581598 FAM25CB3EWG5 89 aa16.51■□□□□ 0.23
CCDC42-203ENST00000581598 FAM25GB3EWG6 89 aa16.51■□□□□ 0.23
CCDC42-203ENST00000581598 SOCS1O15524 211 aa16.51■□□□□ 0.23
CCDC42-203ENST00000581598 SPINT2O43291 252 aa16.51■□□□□ 0.23
CCDC42-203ENST00000581598 XRCC3O43542 346 aa16.51■□□□□ 0.23
CCDC42-203ENST00000581598 TPPPO94811 219 aa16.51■□□□□ 0.23
CCDC42-203ENST00000581598 CHATP28329 748 aa16.51■□□□□ 0.23
CCDC42-203ENST00000581598 REG1BP48304 166 aa16.51■□□□□ 0.23
CCDC42-203ENST00000581598 TMEM50BP56557 158 aa16.51■□□□□ 0.23
CCDC42-203ENST00000581598 SLC35B1P78383 322 aa16.51■□□□□ 0.23
CCDC42-203ENST00000581598 STEAP3Q658P3 488 aa16.51■□□□□ 0.23
CCDC42-203ENST00000581598 ZNF554Q86TJ5 538 aa16.51■□□□□ 0.23
CCDC42-203ENST00000581598 FOXRED2Q8IWF2 684 aa16.51■□□□□ 0.23
CCDC42-203ENST00000581598 LINC00482Q8N8I6 264 aa16.51■□□□□ 0.23
CCDC42-203ENST00000581598 OR10R2Q8NGX6 335 aa16.51■□□□□ 0.23
CCDC42-203ENST00000581598 UBALD1Q8TB05 177 aa16.51■□□□□ 0.23
CCDC42-203ENST00000581598 NOL4LQ96MY1 436 aaPredicted RBP16.51■□□□□ 0.23
CCDC42-203ENST00000581598 DIABLOQ9NR28 239 aa16.51■□□□□ 0.23
CCDC42-203ENST00000581598 EXTL2Q9UBQ6 330 aa16.51■□□□□ 0.23
CCDC42-203ENST00000581598 IGHV3-43A0A0B4J1X8 118 aa16.5■□□□□ 0.23
CCDC42-203ENST00000581598 PDCD6O75340 191 aa16.5■□□□□ 0.23
CCDC42-203ENST00000581598 IGHV3-43DP0DP04 118 aa16.5■□□□□ 0.23
CCDC42-203ENST00000581598 FUT3P21217 361 aa16.5■□□□□ 0.23
CCDC42-203ENST00000581598 BLVRBP30043 206 aaPredicted RBP16.5■□□□□ 0.23
CCDC42-203ENST00000581598 PLAC9Q5JTB6 97 aa16.5■□□□□ 0.23
CCDC42-203ENST00000581598 FAM53AQ6NSI3 398 aaPredicted RBP16.5■□□□□ 0.23
CCDC42-203ENST00000581598 ETV3LQ6ZN32 361 aa16.5■□□□□ 0.23
CCDC42-203ENST00000581598 STPG2Q8N412 459 aa16.5■□□□□ 0.23
CCDC42-203ENST00000581598 Q8N9W7 124 aa16.5■□□□□ 0.23
CCDC42-203ENST00000581598 OR8H1Q8NGG4 311 aa16.5■□□□□ 0.23
CCDC42-203ENST00000581598 OR4K15Q8NH41 348 aa16.5■□□□□ 0.23
CCDC42-203ENST00000581598 DIRAS2Q96HU8 199 aa16.5■□□□□ 0.23
CCDC42-203ENST00000581598 GPR61Q9BZJ8 451 aa16.5■□□□□ 0.23
CCDC42-203ENST00000581598 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.5■□□□□ 0.23
CCDC42-203ENST00000581598 MBNL3Q9NUK0 354 aaKnown RBP16.5■□□□□ 0.23
CCDC42-203ENST00000581598 HSF4Q9ULV5 492 aa16.5■□□□□ 0.23
CCDC42-203ENST00000581598 IGHV3-72A0A0B4J1Y9 119 aa16.49■□□□□ 0.23
CCDC42-203ENST00000581598 MOSP00540 346 aa16.49■□□□□ 0.23
CCDC42-203ENST00000581598 HBZP02008 142 aa16.49■□□□□ 0.23
CCDC42-203ENST00000581598 TALDO1P37837 337 aa16.49■□□□□ 0.23
CCDC42-203ENST00000581598 THBS3P49746 956 aa16.49■□□□□ 0.23
CCDC42-203ENST00000581598 LSAMPQ13449 338 aa16.49■□□□□ 0.23
CCDC42-203ENST00000581598 RAB3CQ96E17 227 aa16.49■□□□□ 0.23
CCDC42-203ENST00000581598 AKIP1Q9NQ31 210 aa16.49■□□□□ 0.23
CCDC42-203ENST00000581598 GNG12Q9UBI6 72 aa16.49■□□□□ 0.23
CCDC42-203ENST00000581598 RABL2AQ9UBK7 228 aaPredicted RBP16.49■□□□□ 0.23
CCDC42-203ENST00000581598 RABL2BQ9UNT1 228 aa16.49■□□□□ 0.23
CCDC42-203ENST00000581598 NCBP2LA6PVI3 153 aaKnown RBP16.48■□□□□ 0.23
CCDC42-203ENST00000581598 AP4M1O00189 453 aa16.48■□□□□ 0.23
CCDC42-203ENST00000581598 MFNGO00587 321 aa16.48■□□□□ 0.23
CCDC42-203ENST00000581598 SLC31A2O15432 143 aa16.48■□□□□ 0.23
CCDC42-203ENST00000581598 HIST1H1DP16402 221 aaKnown RBP16.48■□□□□ 0.23
CCDC42-203ENST00000581598 GPR12P47775 334 aa16.48■□□□□ 0.23
CCDC42-203ENST00000581598 ZNF134P52741 427 aa16.48■□□□□ 0.23
CCDC42-203ENST00000581598 TAS2R20P59543 309 aa16.48■□□□□ 0.23
CCDC42-203ENST00000581598 CT45A1Q5HYN5 189 aa16.48■□□□□ 0.23
CCDC42-203ENST00000581598 TMEM69Q5SWH9 247 aa16.48■□□□□ 0.23
CCDC42-203ENST00000581598 MRPL41Q8IXM3 137 aaKnown RBP16.48■□□□□ 0.23
CCDC42-203ENST00000581598 MFSD4AQ8N468 514 aa16.48■□□□□ 0.23
CCDC42-203ENST00000581598 CT45A3Q8NHU0 189 aa16.48■□□□□ 0.23
CCDC42-203ENST00000581598 ARHGAP5-AS1Q96IT6 56 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms