RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 METTL15A6NJ78 407 aa1.5□□□□□ -2.17
SMCHD1-204ENST00000581226 AZIN1O14977 448 aa1.5□□□□□ -2.17
SMCHD1-204ENST00000581226 DENRO43583 198 aaKnown RBP1.5□□□□□ -2.17
SMCHD1-204ENST00000581226 ZNF189O75820 626 aaPredicted RBP1.5□□□□□ -2.17
SMCHD1-204ENST00000581226 IGLV3-27P01718 113 aa1.5□□□□□ -2.17
SMCHD1-204ENST00000581226 CRYGDP07320 174 aa1.5□□□□□ -2.17
SMCHD1-204ENST00000581226 OR13C7P0DN81 318 aa1.5□□□□□ -2.17
SMCHD1-204ENST00000581226 ORM2P19652 201 aa1.5□□□□□ -2.17
SMCHD1-204ENST00000581226 CDK2P24941 298 aa1.5□□□□□ -2.17
SMCHD1-204ENST00000581226 HLA-DRB5Q30154 266 aa1.5□□□□□ -2.17
SMCHD1-204ENST00000581226 KRTAP21-3Q3LHN1 58 aa1.5□□□□□ -2.17
SMCHD1-204ENST00000581226 MRPL51Q4U2R6 128 aaKnown RBP1.5□□□□□ -2.17
SMCHD1-204ENST00000581226 CD302Q8IX05 232 aa1.5□□□□□ -2.17
SMCHD1-204ENST00000581226 PPWD1Q96BP3 646 aaKnown RBP1.5□□□□□ -2.17
SMCHD1-204ENST00000581226 ACY3Q96HD9 319 aa1.5□□□□□ -2.17
SMCHD1-204ENST00000581226 CAPZA3Q96KX2 299 aa1.5□□□□□ -2.17
SMCHD1-204ENST00000581226 RBP7Q96R05 134 aa1.5□□□□□ -2.17
SMCHD1-204ENST00000581226 C7orf50Q9BRJ6 194 aaKnown RBP1.5□□□□□ -2.17
SMCHD1-204ENST00000581226 C11orf1Q9H5F2 150 aa1.5□□□□□ -2.17
SMCHD1-204ENST00000581226 WASHC3Q9Y3C0 194 aa1.5□□□□□ -2.17
SMCHD1-204ENST00000581226 THSD7AQ9UPZ6 1657 aa1.5□□□□□ -2.17
SMCHD1-204ENST00000581226 TINCRA0A1B0GVN0 87 aa1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 K7EQS6 105 aa1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 LIN7AO14910 233 aaPredicted RBP1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 ARL6IP5O75915 188 aa1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 SOD1P00441 154 aa1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 ATP5G1P05496 136 aa1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 CXCL2P19875 107 aa1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 AGTR1P30556 359 aa1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 HSPA9P38646 679 aaKnown RBP1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 EMP2P54851 167 aa1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 ACTBP60709 375 aa1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 ACTG1P63261 375 aa1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 SMAGPQ0VAQ4 97 aa1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 HTR4Q13639 388 aa1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 LCN8Q6JVE9 175 aa1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 FAM19A5Q7Z5A7 132 aaPredicted RBP1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 SLC13A5Q86YT5 568 aaPredicted RBP1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 ZBTB8OSQ8IWT0 167 aa1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 TMEM156Q8N614 296 aa1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 ATP6V1C2Q8NEY4 427 aa1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 DNAJC30Q96LL9 226 aa1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 TBX5Q99593 518 aa1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 EBNA1BP2Q99848 306 aaKnown RBP1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 CXCL16Q9H2A7 254 aa1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 MS4A6AQ9H2W1 248 aa1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 OR51B6Q9H340 312 aa1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 HEY1Q9Y5J3 304 aa1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 OTOGLQ3ZCN5 2332 aa1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 WDR90Q96KV7 1748 aa1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 NPATQ14207 1427 aa1.49□□□□□ -2.17
SMCHD1-204ENST00000581226 SORL1Q92673 2214 aa1.48□□□□□ -2.17
SMCHD1-204ENST00000581226 A0A1W2PQL4 384 aaPredicted RBP1.48□□□□□ -2.17
SMCHD1-204ENST00000581226 TRAPPC3O43617 180 aa1.48□□□□□ -2.17
SMCHD1-204ENST00000581226 ATP6V1G2O95670 118 aa1.48□□□□□ -2.17
SMCHD1-204ENST00000581226 FBP1P09467 338 aa1.48□□□□□ -2.17
SMCHD1-204ENST00000581226 CXCL3P19876 107 aa1.48□□□□□ -2.17
SMCHD1-204ENST00000581226 MIPP30301 263 aa1.48□□□□□ -2.17
SMCHD1-204ENST00000581226 OR1E2P47887 323 aa1.48□□□□□ -2.17
SMCHD1-204ENST00000581226 GABRA4P48169 554 aa1.48□□□□□ -2.17
SMCHD1-204ENST00000581226 TMEM267Q0VDI3 215 aaPredicted RBP1.48□□□□□ -2.17
SMCHD1-204ENST00000581226 PRDX4Q13162 271 aa1.48□□□□□ -2.17
SMCHD1-204ENST00000581226 SDHAF4Q5VUM1 108 aa1.48□□□□□ -2.17
SMCHD1-204ENST00000581226 DNM1P34Q6PK57 102 aa1.48□□□□□ -2.17
SMCHD1-204ENST00000581226 OR51H1Q8NH63 302 aa1.48□□□□□ -2.17
SMCHD1-204ENST00000581226 SLC37A2Q8TED4 501 aa1.48□□□□□ -2.17
SMCHD1-204ENST00000581226 SMIM12Q96EX1 92 aa1.48□□□□□ -2.17
SMCHD1-204ENST00000581226 TMEM208Q9BTX3 173 aa1.48□□□□□ -2.17
SMCHD1-204ENST00000581226 SLC22A4Q9H015 551 aa1.48□□□□□ -2.17
SMCHD1-204ENST00000581226 PSORS1C2Q9UIG4 136 aa1.48□□□□□ -2.17
SMCHD1-204ENST00000581226 SLIT2O94813 1529 aa1.48□□□□□ -2.17
SMCHD1-204ENST00000581226 NCKAP5O14513 1909 aa1.48□□□□□ -2.17
SMCHD1-204ENST00000581226 DICER1Q9UPY3 1922 aaKnown RBP1.48□□□□□ -2.17
SMCHD1-204ENST00000581226 GBF1Q92538 1859 aa1.48□□□□□ -2.17
SMCHD1-204ENST00000581226 A0A0J9YX75 114 aa1.47□□□□□ -2.17
SMCHD1-204ENST00000581226 DAPL1A0PJW8 107 aa1.47□□□□□ -2.17
SMCHD1-204ENST00000581226 FNDC10F2Z333 226 aa1.47□□□□□ -2.17
SMCHD1-204ENST00000581226 F5H768 121 aa1.47□□□□□ -2.17
SMCHD1-204ENST00000581226 H3BRN7 92 aa1.47□□□□□ -2.17
SMCHD1-204ENST00000581226 CCRL2O00421 344 aa1.47□□□□□ -2.17
SMCHD1-204ENST00000581226 BIRC5O15392 142 aa1.47□□□□□ -2.17
SMCHD1-204ENST00000581226 ZNF7P17097 686 aaPredicted RBP1.47□□□□□ -2.17
SMCHD1-204ENST00000581226 CRYBB3P26998 211 aa1.47□□□□□ -2.17
SMCHD1-204ENST00000581226 OPRM1P35372 400 aa1.47□□□□□ -2.17
SMCHD1-204ENST00000581226 H2BFSP57053 126 aa1.47□□□□□ -2.17
SMCHD1-204ENST00000581226 TSPEAR-AS2P59090 65 aa1.47□□□□□ -2.17
SMCHD1-204ENST00000581226 MGAT3Q09327 533 aa1.47□□□□□ -2.17
SMCHD1-204ENST00000581226 HES1Q14469 280 aa1.47□□□□□ -2.17
SMCHD1-204ENST00000581226 NUMA1Q14980 2115 aa1.47□□□□□ -2.17
SMCHD1-204ENST00000581226 PDK2Q15119 407 aa1.47□□□□□ -2.17
SMCHD1-204ENST00000581226 SS18Q15532 418 aa1.47□□□□□ -2.17
SMCHD1-204ENST00000581226 SCGB1D4Q6XE38 83 aa1.47□□□□□ -2.17
SMCHD1-204ENST00000581226 OR10D3Q8NH80 312 aa1.47□□□□□ -2.17
SMCHD1-204ENST00000581226 MROQ9BYG7 248 aa1.47□□□□□ -2.17
SMCHD1-204ENST00000581226 METTL9Q9H1A3 318 aa1.47□□□□□ -2.17
SMCHD1-204ENST00000581226 MED28Q9H204 178 aa1.47□□□□□ -2.17
SMCHD1-204ENST00000581226 PLEKHJ1Q9NW61 149 aa1.47□□□□□ -2.17
SMCHD1-204ENST00000581226 C15orf41Q9Y2V0 281 aa1.47□□□□□ -2.17
SMCHD1-204ENST00000581226 MINOS1-NBL1R4GNA1 71 aa1.47□□□□□ -2.17
SMCHD1-204ENST00000581226 PTPRJQ12913 1337 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 175.9 ms