RNA–Protein interactions for RNA: ENST00000580958.5

SS18-217, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 775 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-217ENST00000580958 ZBTB34Q8NCN2 500 aa8.68□□□□□ -1.02
SS18-217ENST00000580958 PPP1R1CQ8WVI7 109 aa8.68□□□□□ -1.02
SS18-217ENST00000580958 EDARADDQ8WWZ3 215 aa8.68□□□□□ -1.02
SS18-217ENST00000580958 ABHD14BQ96IU4 210 aa8.68□□□□□ -1.02
SS18-217ENST00000580958 TMEM56Q96MV1 263 aa8.68□□□□□ -1.02
SS18-217ENST00000580958 YPEL2Q96QA6 119 aa8.68□□□□□ -1.02
SS18-217ENST00000580958 LINC00312Q9Y6C7 94 aa8.68□□□□□ -1.02
SS18-217ENST00000580958 TMEM56-RWDD3S4R434 201 aa8.68□□□□□ -1.02
SS18-217ENST00000580958 RNF212BA8MTL3 300 aa8.67□□□□□ -1.02
SS18-217ENST00000580958 HMSDA8MTL9 139 aa8.67□□□□□ -1.02
SS18-217ENST00000580958 SLC31A2O15432 143 aa8.67□□□□□ -1.02
SS18-217ENST00000580958 MMP23AO75900 390 aa8.67□□□□□ -1.02
SS18-217ENST00000580958 GOSR1O95249 250 aa8.67□□□□□ -1.02
SS18-217ENST00000580958 FSTL3O95633 263 aa8.67□□□□□ -1.02
SS18-217ENST00000580958 IGHV3-7P01780 117 aa8.67□□□□□ -1.02
SS18-217ENST00000580958 CCL3L1P16619 93 aa8.67□□□□□ -1.02
SS18-217ENST00000580958 ZNF16P17020 682 aaPredicted RBP8.67□□□□□ -1.02
SS18-217ENST00000580958 CYCSP99999 105 aaKnown RBP8.67□□□□□ -1.02
SS18-217ENST00000580958 IFITM2Q01629 132 aa8.67□□□□□ -1.02
SS18-217ENST00000580958 FGL1Q08830 312 aa8.67□□□□□ -1.02
SS18-217ENST00000580958 EIF4EBP1Q13541 118 aaPredicted RBP8.67□□□□□ -1.02
SS18-217ENST00000580958 MSMO1Q15800 293 aa8.67□□□□□ -1.02
SS18-217ENST00000580958 IAH1Q2TAA2 248 aaPredicted RBP8.67□□□□□ -1.02
SS18-217ENST00000580958 Q3ZCU0 254 aa8.67□□□□□ -1.02
SS18-217ENST00000580958 TMEM200BQ69YZ2 307 aa8.67□□□□□ -1.02
SS18-217ENST00000580958 BTNL3Q6UXE8 466 aa8.67□□□□□ -1.02
SS18-217ENST00000580958 DCHS2Q6V1P9 2916 aa8.67□□□□□ -1.02
SS18-217ENST00000580958 SLC35G3Q8N808 338 aa8.67□□□□□ -1.02
SS18-217ENST00000580958 ZBTB8BQ8NAP8 495 aaPredicted RBP8.67□□□□□ -1.02
SS18-217ENST00000580958 RAB1CQ92928 201 aa8.67□□□□□ -1.02
SS18-217ENST00000580958 LEAP2Q969E1 77 aa8.67□□□□□ -1.02
SS18-217ENST00000580958 TIMD4Q96H15 378 aa8.67□□□□□ -1.02
SS18-217ENST00000580958 SPOCK3Q9BQ16 436 aa8.67□□□□□ -1.02
SS18-217ENST00000580958 LINC00574Q9H8X3 128 aa8.67□□□□□ -1.02
SS18-217ENST00000580958 LIN7CQ9NUP9 197 aaKnown RBP8.67□□□□□ -1.02
SS18-217ENST00000580958 SDHAF2Q9NX18 166 aa8.67□□□□□ -1.02
SS18-217ENST00000580958 PGPEP1Q9NXJ5 209 aa8.67□□□□□ -1.02
SS18-217ENST00000580958 TAS2R3Q9NYW6 316 aa8.67□□□□□ -1.02
SS18-217ENST00000580958 GSKIPQ9P0R6 139 aa8.67□□□□□ -1.02
SS18-217ENST00000580958 LPAR3Q9UBY5 353 aa8.67□□□□□ -1.02
SS18-217ENST00000580958 FAM208BQ5VWN6 2430 aa8.66□□□□□ -1.02
SS18-217ENST00000580958 UBR5O95071 2799 aaPredicted RBP8.66□□□□□ -1.02
SS18-217ENST00000580958 A0A1W2PPE3 182 aa8.66□□□□□ -1.02
SS18-217ENST00000580958 ITGB1BP1O14713 200 aa8.66□□□□□ -1.02
SS18-217ENST00000580958 ARPC5O15511 151 aa8.66□□□□□ -1.02
SS18-217ENST00000580958 NDUFS7O75251 213 aa8.66□□□□□ -1.02
SS18-217ENST00000580958 MPC2O95563 127 aa8.66□□□□□ -1.02
SS18-217ENST00000580958 CDS2O95674 445 aa8.66□□□□□ -1.02
SS18-217ENST00000580958 SLC25A4P12235 298 aa8.66□□□□□ -1.02
SS18-217ENST00000580958 CXCL2P19875 107 aa8.66□□□□□ -1.02
SS18-217ENST00000580958 PSMB6P28072 239 aa8.66□□□□□ -1.02
SS18-217ENST00000580958 SSTR2P30874 369 aa8.66□□□□□ -1.02
SS18-217ENST00000580958 GPR12P47775 334 aa8.66□□□□□ -1.02
SS18-217ENST00000580958 RPL30P62888 115 aaKnown RBP8.66□□□□□ -1.02
SS18-217ENST00000580958 TLE4Q04727 773 aa8.66□□□□□ -1.02
SS18-217ENST00000580958 IL15RAQ13261 267 aa8.66□□□□□ -1.02
SS18-217ENST00000580958 TMEM30BQ3MIR4 351 aa8.66□□□□□ -1.02
SS18-217ENST00000580958 C11orf87Q6NUJ2 197 aa8.66□□□□□ -1.02
SS18-217ENST00000580958 FAM219AQ8IW50 185 aa8.66□□□□□ -1.02
SS18-217ENST00000580958 THAP6Q8TBB0 222 aa8.66□□□□□ -1.02
SS18-217ENST00000580958 ZNF714Q96N38 554 aa8.66□□□□□ -1.02
SS18-217ENST00000580958 ABHD14AQ9BUJ0 271 aa8.66□□□□□ -1.02
SS18-217ENST00000580958 GAL3ST2Q9H3Q3 398 aa8.66□□□□□ -1.02
SS18-217ENST00000580958 CHODLQ9H9P2 273 aa8.66□□□□□ -1.02
SS18-217ENST00000580958 MBD2Q9UBB5 411 aa8.66□□□□□ -1.02
SS18-217ENST00000580958 TMED3Q9Y3Q3 217 aa8.66□□□□□ -1.02
SS18-217ENST00000580958 DUXBA0A1W2PPF3 345 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 H0YIZ8 118 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 L7N2F9 121 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 TSC22D2O75157 780 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 B3GALNT1O75752 331 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 SERPINE2P07093 398 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 LORP23490 312 aaPredicted RBP8.65□□□□□ -1.02
SS18-217ENST00000580958 GNG10P50151 68 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 ZNF134P52741 427 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 DLX6P56179 175 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 ERVFRD-1P60508 538 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 S100A10P60903 97 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 CATR1Q13166 79 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 RAB32Q13637 225 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 TMEM155Q4W5P6 130 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 CT45A1Q5HYN5 189 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 OR2B11Q5JQS5 317 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 ZNF841Q6ZN19 808 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 TMUB2Q71RG4 321 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 ZNF439Q8NDP4 499 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 OR10A7Q8NGE5 316 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 OR8B3Q8NGG8 313 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 OR52M1Q8NGK5 317 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 CT45A3Q8NHU0 189 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 FAM216AQ8WUB2 273 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 TCTEX1D2Q8WW35 142 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 RBPMSQ93062 196 aaKnown RBP8.65□□□□□ -1.02
SS18-217ENST00000580958 IL22RA2Q969J5 263 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 NEIL1Q96FI4 390 aaPredicted RBP8.65□□□□□ -1.02
SS18-217ENST00000580958 OR8B2Q96RD0 313 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 AGMATQ9BSE5 352 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 IFI27L2Q9H2X8 130 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 PLEKHF2Q9H8W4 249 aa8.65□□□□□ -1.02
SS18-217ENST00000580958 MIOXQ9UGB7 285 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms