RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 DEFA3P59666 94 aa11.62□□□□□ -0.55
SKA2-205ENST00000580541 KLF9Q13886 244 aaPredicted RBP11.62□□□□□ -0.55
SKA2-205ENST00000580541 FAM71F2Q6NXP2 309 aa11.62□□□□□ -0.55
SKA2-205ENST00000580541 C16orf87Q6PH81 154 aa11.62□□□□□ -0.55
SKA2-205ENST00000580541 C5orf24Q7Z6I8 188 aa11.62□□□□□ -0.55
SKA2-205ENST00000580541 LYG1Q8N1E2 194 aa11.62□□□□□ -0.55
SKA2-205ENST00000580541 ZBTB34Q8NCN2 500 aa11.62□□□□□ -0.55
SKA2-205ENST00000580541 ZNF439Q8NDP4 499 aa11.62□□□□□ -0.55
SKA2-205ENST00000580541 OR8U1Q8NH10 309 aa11.62□□□□□ -0.55
SKA2-205ENST00000580541 TERB2Q8NHR7 220 aa11.62□□□□□ -0.55
SKA2-205ENST00000580541 SDHCQ99643 169 aaPredicted RBP11.62□□□□□ -0.55
SKA2-205ENST00000580541 ABCB10Q9NRK6 738 aa11.62□□□□□ -0.55
SKA2-205ENST00000580541 ZNF469Q96JG9 3925 aaPredicted RBP11.62□□□□□ -0.55
SKA2-205ENST00000580541 F8P00451 2351 aa11.62□□□□□ -0.55
SKA2-205ENST00000580541 FSHBP01225 129 aa11.61□□□□□ -0.55
SKA2-205ENST00000580541 FBP1P09467 338 aa11.61□□□□□ -0.55
SKA2-205ENST00000580541 SRD5A1P18405 259 aa11.61□□□□□ -0.55
SKA2-205ENST00000580541 AADACP22760 399 aa11.61□□□□□ -0.55
SKA2-205ENST00000580541 SAA4P35542 130 aa11.61□□□□□ -0.55
SKA2-205ENST00000580541 ZNF134P52741 427 aa11.61□□□□□ -0.55
SKA2-205ENST00000580541 DLX1P56177 255 aa11.61□□□□□ -0.55
SKA2-205ENST00000580541 MSMO1Q15800 293 aa11.61□□□□□ -0.55
SKA2-205ENST00000580541 SCGB2B2Q4G0G5 96 aa11.61□□□□□ -0.55
SKA2-205ENST00000580541 KLF17Q5JT82 389 aaPredicted RBP11.61□□□□□ -0.55
SKA2-205ENST00000580541 MZT2BQ6NZ67 158 aa11.61□□□□□ -0.55
SKA2-205ENST00000580541 C9orf139Q6ZV77 190 aa11.61□□□□□ -0.55
SKA2-205ENST00000580541 CMTM1Q8IZ96 169 aa11.61□□□□□ -0.55
SKA2-205ENST00000580541 OR4P4Q8NGL7 312 aa11.61□□□□□ -0.55
SKA2-205ENST00000580541 OR4C16Q8NGL9 310 aa11.61□□□□□ -0.55
SKA2-205ENST00000580541 ZFAND1Q8TCF1 268 aa11.61□□□□□ -0.55
SKA2-205ENST00000580541 AKR1E2Q96JD6 320 aa11.61□□□□□ -0.55
SKA2-205ENST00000580541 AGMATQ9BSE5 352 aa11.61□□□□□ -0.55
SKA2-205ENST00000580541 TINAGL1Q9GZM7 467 aaPredicted RBP11.61□□□□□ -0.55
SKA2-205ENST00000580541 GSX1Q9H4S2 264 aaPredicted RBP11.61□□□□□ -0.55
SKA2-205ENST00000580541 HRASLSQ9HDD0 168 aa11.61□□□□□ -0.55
SKA2-205ENST00000580541 ZANQ9Y493 2812 aa11.6□□□□□ -0.55
SKA2-205ENST00000580541 IGHV3OR16-10A0A075B7F0 116 aa11.6□□□□□ -0.55
SKA2-205ENST00000580541 A0A1W2PPE3 182 aa11.6□□□□□ -0.55
SKA2-205ENST00000580541 A0A1W2PRD5 423 aa11.6□□□□□ -0.55
SKA2-205ENST00000580541 A0A1W2PRF3 423 aa11.6□□□□□ -0.55
SKA2-205ENST00000580541 A0A1W2PRM7 423 aa11.6□□□□□ -0.55
SKA2-205ENST00000580541 J3QRK9 145 aa11.6□□□□□ -0.55
SKA2-205ENST00000580541 ST8SIA5O15466 376 aa11.6□□□□□ -0.55
SKA2-205ENST00000580541 BRS3P32247 399 aa11.6□□□□□ -0.55
SKA2-205ENST00000580541 ZNF137PP52743 207 aa11.6□□□□□ -0.55
SKA2-205ENST00000580541 UCP3P55916 312 aa11.6□□□□□ -0.55
SKA2-205ENST00000580541 FXYD4P59646 89 aa11.6□□□□□ -0.55
SKA2-205ENST00000580541 TAGLNQ01995 201 aaKnown RBP11.6□□□□□ -0.55
SKA2-205ENST00000580541 PRB3Q04118 309 aaPredicted RBP11.6□□□□□ -0.55
SKA2-205ENST00000580541 RBMS3Q6XE24 437 aaKnown RBP11.6□□□□□ -0.55
SKA2-205ENST00000580541 BRD3OSQ6XYD6 125 aa11.6□□□□□ -0.55
SKA2-205ENST00000580541 OR8H3Q8N146 312 aa11.6□□□□□ -0.55
SKA2-205ENST00000580541 ZNF645Q8N7E2 425 aa11.6□□□□□ -0.55
SKA2-205ENST00000580541 TOMM40LQ969M1 308 aa11.6□□□□□ -0.55
SKA2-205ENST00000580541 MOB3AQ96BX8 217 aa11.6□□□□□ -0.55
SKA2-205ENST00000580541 SLC6A7Q99884 636 aa11.6□□□□□ -0.55
SKA2-205ENST00000580541 SLC5A7Q9GZV3 580 aa11.6□□□□□ -0.55
SKA2-205ENST00000580541 SLC2A8Q9NY64 477 aa11.6□□□□□ -0.55
SKA2-205ENST00000580541 RNF150Q9ULK6 438 aa11.6□□□□□ -0.55
SKA2-205ENST00000580541 HIVEP1P15822 2718 aa11.6□□□□□ -0.55
SKA2-205ENST00000580541 SURF2Q15527 256 aaPredicted RBP11.59□□□□□ -0.55
SKA2-205ENST00000580541 SSX2Q16385 188 aa11.59□□□□□ -0.55
SKA2-205ENST00000580541 TPTE2P1Q5T6R2 138 aa11.59□□□□□ -0.55
SKA2-205ENST00000580541 ZNF660Q6AZW8 331 aaPredicted RBP11.59□□□□□ -0.55
SKA2-205ENST00000580541 IDO2Q6ZQW0 420 aa11.59□□□□□ -0.55
SKA2-205ENST00000580541 TGIF2LXQ8IUE1 241 aa11.59□□□□□ -0.55
SKA2-205ENST00000580541 SLC38A6Q8IZM9 456 aa11.59□□□□□ -0.55
SKA2-205ENST00000580541 OR51S1Q8NGJ8 323 aa11.59□□□□□ -0.55
SKA2-205ENST00000580541 OR56B4Q8NH76 319 aa11.59□□□□□ -0.55
SKA2-205ENST00000580541 SECTM1Q8WVN6 248 aa11.59□□□□□ -0.55
SKA2-205ENST00000580541 ZDHHC16Q969W1 377 aa11.59□□□□□ -0.55
SKA2-205ENST00000580541 ADTRPQ96IZ2 230 aa11.59□□□□□ -0.55
SKA2-205ENST00000580541 SLC25A21Q9BQT8 299 aaPredicted RBP11.59□□□□□ -0.55
SKA2-205ENST00000580541 MEGF9Q9H1U4 602 aa11.59□□□□□ -0.55
SKA2-205ENST00000580541 OR2D2Q9H210 308 aa11.59□□□□□ -0.55
SKA2-205ENST00000580541 PALMDQ9NP74 551 aa11.59□□□□□ -0.55
SKA2-205ENST00000580541 LINC00854A0A1B0GVQ3 168 aa11.58□□□□□ -0.56
SKA2-205ENST00000580541 LY6LH3BQJ8 138 aa11.58□□□□□ -0.56
SKA2-205ENST00000580541 HSD17B6O14756 317 aa11.58□□□□□ -0.56
SKA2-205ENST00000580541 SLC31A2O15432 143 aa11.58□□□□□ -0.56
SKA2-205ENST00000580541 PGAM2P15259 253 aa11.58□□□□□ -0.56
SKA2-205ENST00000580541 ZNF816Q0VGE8 651 aaPredicted RBP11.58□□□□□ -0.56
SKA2-205ENST00000580541 AANATQ16613 207 aa11.58□□□□□ -0.56
SKA2-205ENST00000580541 FAM53AQ6NSI3 398 aaPredicted RBP11.58□□□□□ -0.56
SKA2-205ENST00000580541 C11orf88Q6PI97 169 aa11.58□□□□□ -0.56
SKA2-205ENST00000580541 OR4D10Q8NGI6 311 aa11.58□□□□□ -0.56
SKA2-205ENST00000580541 ZNF486Q96H40 463 aaPredicted RBP11.58□□□□□ -0.56
SKA2-205ENST00000580541 ABHD14BQ96IU4 210 aa11.58□□□□□ -0.56
SKA2-205ENST00000580541 KRTAP3-3Q9BYR6 98 aa11.58□□□□□ -0.56
SKA2-205ENST00000580541 KRTAP3-2Q9BYR7 98 aa11.58□□□□□ -0.56
SKA2-205ENST00000580541 IFI27L2Q9H2X8 130 aa11.58□□□□□ -0.56
SKA2-205ENST00000580541 HILPDAQ9Y5L2 63 aa11.58□□□□□ -0.56
SKA2-205ENST00000580541 CELSR1Q9NYQ6 3014 aa11.58□□□□□ -0.56
SKA2-205ENST00000580541 SAA2-SAA4A0A096LPE2 208 aa11.57□□□□□ -0.56
SKA2-205ENST00000580541 BTBD17A6NE02 478 aa11.57□□□□□ -0.56
SKA2-205ENST00000580541 RNF212BA8MTL3 300 aa11.57□□□□□ -0.56
SKA2-205ENST00000580541 GPR31O00270 319 aa11.57□□□□□ -0.56
SKA2-205ENST00000580541 LYRM1O43325 122 aa11.57□□□□□ -0.56
SKA2-205ENST00000580541 ZNF735P0CB33 412 aa11.57□□□□□ -0.56
SKA2-205ENST00000580541 SAA2P0DJI9 122 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms