RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 C1orf196B1AJZ1 125 aa8.86□□□□□ -0.99
TOP3A-209ENST00000580095 HOXC12P31275 282 aa8.86□□□□□ -0.99
TOP3A-209ENST00000580095 UBE2NP61088 152 aaKnown RBP8.86□□□□□ -0.99
TOP3A-209ENST00000580095 LTC4SQ16873 150 aa8.86□□□□□ -0.99
TOP3A-209ENST00000580095 SPINK9Q5DT21 86 aa8.86□□□□□ -0.99
TOP3A-209ENST00000580095 CYB561D1Q8N8Q1 229 aa8.86□□□□□ -0.99
TOP3A-209ENST00000580095 OR1L1Q8NH94 360 aa8.86□□□□□ -0.99
TOP3A-209ENST00000580095 TMPRSS5Q9H3S3 457 aa8.86□□□□□ -0.99
TOP3A-209ENST00000580095 MSL2Q9HCI7 577 aa8.86□□□□□ -0.99
TOP3A-209ENST00000580095 GP6Q9HCN6 339 aa8.86□□□□□ -0.99
TOP3A-209ENST00000580095 STRAPQ9Y3F4 350 aaKnown RBP8.86□□□□□ -0.99
TOP3A-209ENST00000580095 KALRNO60229 2985 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 HMGB3O15347 200 aaKnown RBP8.85□□□□□ -0.99
TOP3A-209ENST00000580095 RAMP3O60896 148 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 IGHV3-13P01766 116 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 IGHV3-7P01780 117 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 ZNF14P17017 642 aaPredicted RBP8.85□□□□□ -0.99
TOP3A-209ENST00000580095 UCP2P55851 309 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 RAB2AP61019 212 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 AESQ08117 197 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 SPANXN5Q5MJ07 72 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 AKR1C8PQ5T2L2 129 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 ZNF343Q6P1L6 599 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 LCN15Q6UWW0 184 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 BTNL3Q6UXE8 466 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 RFESDQ8TAC1 157 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 FER1L6-AS2Q96M78 137 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 PBDC1Q9BVG4 233 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 CDH20Q9HBT6 801 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 ARHGAP21Q5T5U3 1957 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 IGHV3-43A0A0B4J1X8 118 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 DEFB108AA8MXU0 73 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 KRASP01116 189 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 CTXN2P0C2S0 81 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 IGHV3-43DP0DP04 118 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 LMO1P25800 156 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 FABP6P51161 128 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 TNFRSF9Q07011 255 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 OR8G1Q15617 311 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 ZNF585BQ52M93 769 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 PRAMEF6Q5VXH4 476 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 VWA1Q6PCB0 445 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 ATG101Q9BSB4 218 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 RTL8AQ9BWD3 113 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 GNG13Q9P2W3 67 aa8.85□□□□□ -0.99
TOP3A-209ENST00000580095 A0A087X0M5 115 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 A0A1B0GX30 115 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 ZFP92A6NM28 416 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 KIAA1324LA8MWY0 1029 aaPredicted RBP8.84□□□□□ -0.99
TOP3A-209ENST00000580095 WT1P19544 449 aaPredicted RBP8.84□□□□□ -0.99
TOP3A-209ENST00000580095 RAB5CP51148 216 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 ZNF816Q0VGE8 651 aaPredicted RBP8.84□□□□□ -0.99
TOP3A-209ENST00000580095 PLA2G2CQ5R387 149 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 OR8G2PQ6IF36 304 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 OR52L2PQ8NGH6 319 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 TCTEX1D2Q8WW35 142 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 DCTN5Q9BTE1 182 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 PLK3Q9H4B4 646 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 ASCL3Q9NQ33 180 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 H3BQ15 152 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 NQO2P16083 231 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 OR3A1P47881 315 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 ELLP55199 621 aaPredicted RBP8.84□□□□□ -0.99
TOP3A-209ENST00000580095 ZNF497Q6ZNH5 498 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 Q6ZR03 302 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 SSX7Q7RTT5 188 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 DRAM1Q8N682 238 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 C15orf54Q8N8G6 183 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 FDCSPQ8NFU4 85 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 ATP5SQ99766 215 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 PARD6GQ9BYG4 376 aaPredicted RBP8.84□□□□□ -0.99
TOP3A-209ENST00000580095 METRNQ9UJH8 293 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 KMT2EQ8IZD2 1858 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 SPAARA0A1B0GVQ0 90 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 CD55P08174 381 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 RAB5AP20339 215 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 S100GP29377 79 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 RPS23P62266 143 aaKnown RBP8.84□□□□□ -0.99
TOP3A-209ENST00000580095 FOXF2Q12947 444 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 HAPLN4Q86UW8 402 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 KLF14Q8TD94 323 aaPredicted RBP8.84□□□□□ -0.99
TOP3A-209ENST00000580095 NANOS1Q8WY41 292 aaKnown RBP8.84□□□□□ -0.99
TOP3A-209ENST00000580095 SIRT7Q9NRC8 400 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 RPRMQ9NS64 109 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 GFOD1Q9NXC2 390 aa8.84□□□□□ -0.99
TOP3A-209ENST00000580095 TNRC6AQ8NDV7 1962 aaKnown RBP8.83□□□□□ -1
TOP3A-209ENST00000580095 G6PCP35575 357 aa8.83□□□□□ -1
TOP3A-209ENST00000580095 TNFSF10P50591 281 aa8.83□□□□□ -1
TOP3A-209ENST00000580095 RPL23AP62750 156 aaKnown RBP8.83□□□□□ -1
TOP3A-209ENST00000580095 ICAM4Q14773 271 aa8.83□□□□□ -1
TOP3A-209ENST00000580095 SPNS3Q6ZMD2 512 aa8.83□□□□□ -1
TOP3A-209ENST00000580095 MRGPRDQ8TDS7 321 aa8.83□□□□□ -1
TOP3A-209ENST00000580095 S100PBPQ96BU1 408 aa8.83□□□□□ -1
TOP3A-209ENST00000580095 RAB39BQ96DA2 213 aa8.83□□□□□ -1
TOP3A-209ENST00000580095 ZNF665Q9H7R5 613 aa8.83□□□□□ -1
TOP3A-209ENST00000580095 PSENENQ9NZ42 101 aa8.83□□□□□ -1
TOP3A-209ENST00000580095 INTS1Q8N201 2190 aaKnown RBP8.83□□□□□ -1
TOP3A-209ENST00000580095 CLEC18AA5D8T8 446 aa8.83□□□□□ -1
TOP3A-209ENST00000580095 MLNRO43193 412 aa8.83□□□□□ -1
TOP3A-209ENST00000580095 SYNGR2O43760 224 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms