RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 AGMATQ9BSE5 352 aa11□□□□□ -0.65
SRSF1-202ENST00000578430 PARP12Q9H0J9 701 aaKnown RBP11□□□□□ -0.65
SRSF1-202ENST00000578430 METTL8Q9H825 291 aaKnown RBP11□□□□□ -0.65
SRSF1-202ENST00000578430 CCL28Q9NRJ3 127 aa11□□□□□ -0.65
SRSF1-202ENST00000578430 SLC2A9Q9NRM0 540 aa11□□□□□ -0.65
SRSF1-202ENST00000578430 ONECUT1Q9UBC0 465 aa11□□□□□ -0.65
SRSF1-202ENST00000578430 ZNF221Q9UK13 617 aa11□□□□□ -0.65
SRSF1-202ENST00000578430 PSG11Q9UQ72 335 aa11□□□□□ -0.65
SRSF1-202ENST00000578430 KCNIP3Q9Y2W7 256 aa11□□□□□ -0.65
SRSF1-202ENST00000578430 ALG5Q9Y673 324 aa11□□□□□ -0.65
SRSF1-202ENST00000578430 HIVEP1P15822 2718 aa11□□□□□ -0.65
SRSF1-202ENST00000578430 A0A096LNT2 108 aa10.99□□□□□ -0.65
SRSF1-202ENST00000578430 A0A0A6YYJ9 748 aa10.99□□□□□ -0.65
SRSF1-202ENST00000578430 A0A0B4J293 547 aa10.99□□□□□ -0.65
SRSF1-202ENST00000578430 PIGBOS1A0A0B4J2F0 54 aa10.99□□□□□ -0.65
SRSF1-202ENST00000578430 TEX13DA0A0J9YY54 714 aaPredicted RBP10.99□□□□□ -0.65
SRSF1-202ENST00000578430 A0A1B0GVG6 124 aa10.99□□□□□ -0.65
SRSF1-202ENST00000578430 RNF212BA8MTL3 300 aa10.99□□□□□ -0.65
SRSF1-202ENST00000578430 ANXA3P12429 323 aa10.99□□□□□ -0.65
SRSF1-202ENST00000578430 PI3P19957 117 aa10.99□□□□□ -0.65
SRSF1-202ENST00000578430 PRTN3P24158 256 aa10.99□□□□□ -0.65
SRSF1-202ENST00000578430 CT45A1Q5HYN5 189 aa10.99□□□□□ -0.65
SRSF1-202ENST00000578430 ZNF626Q68DY1 528 aa10.99□□□□□ -0.65
SRSF1-202ENST00000578430 ZNF818PQ6ZRF7 136 aa10.99□□□□□ -0.65
SRSF1-202ENST00000578430 LDLRAD3Q86YD5 345 aa10.99□□□□□ -0.65
SRSF1-202ENST00000578430 OR13D1Q8NGV5 346 aa10.99□□□□□ -0.65
SRSF1-202ENST00000578430 OR9G1Q8NH87 305 aa10.99□□□□□ -0.65
SRSF1-202ENST00000578430 CT45A3Q8NHU0 189 aa10.99□□□□□ -0.65
SRSF1-202ENST00000578430 RTN4IP1Q8WWV3 396 aaPredicted RBP10.99□□□□□ -0.65
SRSF1-202ENST00000578430 TMEM230Q96A57 120 aa10.99□□□□□ -0.65
SRSF1-202ENST00000578430 GALNT14Q96FL9 552 aa10.99□□□□□ -0.65
SRSF1-202ENST00000578430 SUCNR1Q9BXA5 334 aa10.99□□□□□ -0.65
SRSF1-202ENST00000578430 BEX2Q9BXY8 128 aa10.99□□□□□ -0.65
SRSF1-202ENST00000578430 OR2D2Q9H210 308 aa10.99□□□□□ -0.65
SRSF1-202ENST00000578430 OR51J1Q9H342 316 aa10.99□□□□□ -0.65
SRSF1-202ENST00000578430 HEXA-AS1Q9H8Q6 139 aa10.99□□□□□ -0.65
SRSF1-202ENST00000578430 BEX1Q9HBH7 125 aa10.99□□□□□ -0.65
SRSF1-202ENST00000578430 PIPOXQ9P0Z9 390 aa10.99□□□□□ -0.65
SRSF1-202ENST00000578430 ITGB1BP2Q9UKP3 347 aa10.99□□□□□ -0.65
SRSF1-202ENST00000578430 KCNS2Q9ULS6 477 aa10.99□□□□□ -0.65
SRSF1-202ENST00000578430 A0A0B4J2A0 478 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 C9orf170A2RU37 121 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 B4DSR2 109 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 FAM157AC9JC47 383 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 HSD17B6O14756 317 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 RAB29O14966 203 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 MPPED1O15442 326 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 ST8SIA5O15466 376 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 SFT2D2O95562 160 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 DUS4LO95620 317 aaKnown RBP10.98□□□□□ -0.65
SRSF1-202ENST00000578430 HLA-AP01891 365 aaKnown RBP10.98□□□□□ -0.65
SRSF1-202ENST00000578430 TRAPPC2P0DI81 140 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 TRAPPC2BP0DI82 140 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 GATA3P23771 443 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 GPR12P47775 334 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 BCAP31P51572 246 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 DVL1P1P54792 670 aaPredicted RBP10.98□□□□□ -0.65
SRSF1-202ENST00000578430 PRRX1P54821 245 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 ARF6P62330 175 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 DHRS2Q13268 280 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 PPP1R1AQ13522 171 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 PHLDA2Q53GA4 152 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 FAM71F2Q6NXP2 309 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 ZNF66Q6ZN08 573 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 ABHD12Q8N2K0 398 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 DRAM1Q8N682 238 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 TCTEX1D1Q8N7M0 179 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 Q8N7P7 452 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 CHAC2Q8WUX2 184 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 CAPSLQ8WWF8 208 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 CLEC7AQ9BXN2 247 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 IFI27L2Q9H2X8 130 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 NAA60Q9H7X0 242 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 SHPKQ9UHJ6 478 aa10.98□□□□□ -0.65
SRSF1-202ENST00000578430 YLPM1P49750 1951 aaKnown RBP10.97□□□□□ -0.65
SRSF1-202ENST00000578430 hCG_2014768A0A024R1R8 64 aa10.97□□□□□ -0.65
SRSF1-202ENST00000578430 TRAV20A0A0B4J274 112 aa10.97□□□□□ -0.65
SRSF1-202ENST00000578430 J3QR06 171 aa10.97□□□□□ -0.65
SRSF1-202ENST00000578430 TOR1AO14656 332 aa10.97□□□□□ -0.65
SRSF1-202ENST00000578430 PGLYRP1O75594 196 aaPredicted RBP10.97□□□□□ -0.65
SRSF1-202ENST00000578430 IFNA2P01563 188 aa10.97□□□□□ -0.65
SRSF1-202ENST00000578430 IGLV2-14P01704 120 aa10.97□□□□□ -0.65
SRSF1-202ENST00000578430 MSMBP08118 114 aa10.97□□□□□ -0.65
SRSF1-202ENST00000578430 VAMP1P23763 118 aa10.97□□□□□ -0.65
SRSF1-202ENST00000578430 IL3RAP26951 378 aa10.97□□□□□ -0.65
SRSF1-202ENST00000578430 ZNF134P52741 427 aa10.97□□□□□ -0.65
SRSF1-202ENST00000578430 SRPXP78539 464 aa10.97□□□□□ -0.65
SRSF1-202ENST00000578430 CBX3Q13185 183 aa10.97□□□□□ -0.65
SRSF1-202ENST00000578430 NCR3LG1Q68D85 454 aa10.97□□□□□ -0.65
SRSF1-202ENST00000578430 FAM53AQ6NSI3 398 aaPredicted RBP10.97□□□□□ -0.65
SRSF1-202ENST00000578430 CADM3Q8N126 398 aa10.97□□□□□ -0.65
SRSF1-202ENST00000578430 BEND2Q8NDZ0 799 aa10.97□□□□□ -0.65
SRSF1-202ENST00000578430 MITD1Q8WV92 249 aa10.97□□□□□ -0.65
SRSF1-202ENST00000578430 S1PR3Q99500 378 aa10.97□□□□□ -0.65
SRSF1-202ENST00000578430 PHB2Q99623 299 aa10.97□□□□□ -0.65
SRSF1-202ENST00000578430 HSD17B10Q99714 261 aaKnown RBP10.97□□□□□ -0.65
SRSF1-202ENST00000578430 SEC22CQ9BRL7 303 aa10.97□□□□□ -0.65
SRSF1-202ENST00000578430 REG4Q9BYZ8 158 aa10.97□□□□□ -0.65
SRSF1-202ENST00000578430 SIRPDQ9H106 197 aa10.97□□□□□ -0.65
SRSF1-202ENST00000578430 FAM212BQ9NTI7 297 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms