RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 FAM46BQ96A09 425 aa11.32□□□□□ -0.6
SMARCE1-213ENST00000578044 FAAP24Q9BTP7 215 aa11.32□□□□□ -0.6
SMARCE1-213ENST00000578044 CENPOQ9BU64 300 aa11.32□□□□□ -0.6
SMARCE1-213ENST00000578044 ANKRD60Q9BZ19 345 aa11.32□□□□□ -0.6
SMARCE1-213ENST00000578044 TOLLIPQ9H0E2 274 aa11.32□□□□□ -0.6
SMARCE1-213ENST00000578044 LPAR5Q9H1C0 372 aa11.32□□□□□ -0.6
SMARCE1-213ENST00000578044 PLEKHJ1Q9NW61 149 aa11.32□□□□□ -0.6
SMARCE1-213ENST00000578044 KIAA1456Q9P272 454 aa11.32□□□□□ -0.6
SMARCE1-213ENST00000578044 IGHV7-81A0A0B4J1V7 117 aa11.31□□□□□ -0.6
SMARCE1-213ENST00000578044 PTGES3LE9PB15 166 aa11.31□□□□□ -0.6
SMARCE1-213ENST00000578044 I3L521 148 aa11.31□□□□□ -0.6
SMARCE1-213ENST00000578044 CPEP16870 476 aa11.31□□□□□ -0.6
SMARCE1-213ENST00000578044 MYF6P23409 242 aa11.31□□□□□ -0.6
SMARCE1-213ENST00000578044 HOXD3P31249 432 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-213ENST00000578044 LUMP51884 338 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-213ENST00000578044 INSL4Q14641 139 aa11.31□□□□□ -0.6
SMARCE1-213ENST00000578044 NKAPLQ5M9Q1 402 aa11.31□□□□□ -0.6
SMARCE1-213ENST00000578044 FAM27D1Q5T7N8 215 aa11.31□□□□□ -0.6
SMARCE1-213ENST00000578044 PYHIN1Q6K0P9 492 aa11.31□□□□□ -0.6
SMARCE1-213ENST00000578044 LIN54Q6MZP7 749 aa11.31□□□□□ -0.6
SMARCE1-213ENST00000578044 CD200R1LQ6Q8B3 271 aa11.31□□□□□ -0.6
SMARCE1-213ENST00000578044 LCNL1Q6ZST4 164 aa11.31□□□□□ -0.6
SMARCE1-213ENST00000578044 PRSS48Q7RTY5 328 aa11.31□□□□□ -0.6
SMARCE1-213ENST00000578044 ZNF491Q8N8L2 437 aa11.31□□□□□ -0.6
SMARCE1-213ENST00000578044 TMED9Q9BVK6 235 aa11.31□□□□□ -0.6
SMARCE1-213ENST00000578044 MRPL20Q9BYC9 149 aaKnown RBP11.31□□□□□ -0.6
SMARCE1-213ENST00000578044 ACOT13Q9NPJ3 140 aa11.31□□□□□ -0.6
SMARCE1-213ENST00000578044 VSIG4Q9Y279 399 aa11.31□□□□□ -0.6
SMARCE1-213ENST00000578044 NBEAL2Q6ZNJ1 2754 aa11.3□□□□□ -0.6
SMARCE1-213ENST00000578044 SPDEFO95238 335 aa11.3□□□□□ -0.6
SMARCE1-213ENST00000578044 OR8U8P0C7N1 319 aa11.3□□□□□ -0.6
SMARCE1-213ENST00000578044 ARSBP15848 533 aa11.3□□□□□ -0.6
SMARCE1-213ENST00000578044 GALP22466 123 aa11.3□□□□□ -0.6
SMARCE1-213ENST00000578044 ZBTB25P24278 435 aa11.3□□□□□ -0.6
SMARCE1-213ENST00000578044 MED22Q15528 200 aa11.3□□□□□ -0.6
SMARCE1-213ENST00000578044 TMEM65Q6PI78 240 aa11.3□□□□□ -0.6
SMARCE1-213ENST00000578044 TMEM91Q6ZNR0 172 aa11.3□□□□□ -0.6
SMARCE1-213ENST00000578044 C12orf4Q9NQ89 552 aa11.3□□□□□ -0.6
SMARCE1-213ENST00000578044 GAB2Q9UQC2 676 aa11.3□□□□□ -0.6
SMARCE1-213ENST00000578044 LSM4Q9Y4Z0 139 aaKnown RBP11.3□□□□□ -0.6
SMARCE1-213ENST00000578044 KMT2CQ8NEZ4 4911 aaKnown RBP11.3□□□□□ -0.6
SMARCE1-213ENST00000578044 TRAV41A0A0B4J266 112 aa11.29□□□□□ -0.6
SMARCE1-213ENST00000578044 RRHO14718 337 aa11.29□□□□□ -0.6
SMARCE1-213ENST00000578044 ATP6V0E1O15342 81 aa11.29□□□□□ -0.6
SMARCE1-213ENST00000578044 RGS10O43665 173 aa11.29□□□□□ -0.6
SMARCE1-213ENST00000578044 CT45A6P0DMU7 189 aa11.29□□□□□ -0.6
SMARCE1-213ENST00000578044 CT45A5P0DMU8 189 aa11.29□□□□□ -0.6
SMARCE1-213ENST00000578044 CT45A7P0DMV0 189 aa11.29□□□□□ -0.6
SMARCE1-213ENST00000578044 SERPINB10P48595 397 aa11.29□□□□□ -0.6
SMARCE1-213ENST00000578044 RAB9AP51151 201 aa11.29□□□□□ -0.6
SMARCE1-213ENST00000578044 TMEM267Q0VDI3 215 aaPredicted RBP11.29□□□□□ -0.6
SMARCE1-213ENST00000578044 P2RY14Q15391 338 aa11.29□□□□□ -0.6
SMARCE1-213ENST00000578044 AKIRIN2Q53H80 203 aa11.29□□□□□ -0.6
SMARCE1-213ENST00000578044 DEFB121Q5J5C9 76 aa11.29□□□□□ -0.6
SMARCE1-213ENST00000578044 LIPKQ5VXJ0 399 aa11.29□□□□□ -0.6
SMARCE1-213ENST00000578044 OR10K2Q6IF99 312 aa11.29□□□□□ -0.6
SMARCE1-213ENST00000578044 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.29□□□□□ -0.6
SMARCE1-213ENST00000578044 OR56B1Q8NGI3 324 aa11.29□□□□□ -0.6
SMARCE1-213ENST00000578044 NICN1Q9BSH3 213 aa11.29□□□□□ -0.6
SMARCE1-213ENST00000578044 VCX3BQ9H321 246 aa11.29□□□□□ -0.6
SMARCE1-213ENST00000578044 SCOCQ9UIL1 159 aa11.29□□□□□ -0.6
SMARCE1-213ENST00000578044 RNF150Q9ULK6 438 aa11.29□□□□□ -0.6
SMARCE1-213ENST00000578044 WASHC3Q9Y3C0 194 aa11.29□□□□□ -0.6
SMARCE1-213ENST00000578044 NUBP2Q9Y5Y2 271 aa11.29□□□□□ -0.6
SMARCE1-213ENST00000578044 TNCP24821 2201 aa11.29□□□□□ -0.6
SMARCE1-213ENST00000578044 H0YJW9 148 aa11.28□□□□□ -0.6
SMARCE1-213ENST00000578044 LDLRAD4O15165 306 aa11.28□□□□□ -0.6
SMARCE1-213ENST00000578044 BRI3O95415 125 aa11.28□□□□□ -0.6
SMARCE1-213ENST00000578044 SLC2A2P11168 524 aaPredicted RBP11.28□□□□□ -0.6
SMARCE1-213ENST00000578044 CRHBPP24387 322 aa11.28□□□□□ -0.6
SMARCE1-213ENST00000578044 OR3A3P47888 321 aa11.28□□□□□ -0.6
SMARCE1-213ENST00000578044 HSPA13P48723 471 aa11.28□□□□□ -0.6
SMARCE1-213ENST00000578044 TMEM50BP56557 158 aa11.28□□□□□ -0.6
SMARCE1-213ENST00000578044 HLA-DRB3P79483 266 aa11.28□□□□□ -0.6
SMARCE1-213ENST00000578044 TAGLNQ01995 201 aaKnown RBP11.28□□□□□ -0.6
SMARCE1-213ENST00000578044 CD69Q07108 199 aa11.28□□□□□ -0.6
SMARCE1-213ENST00000578044 ZNF616Q08AN1 781 aa11.28□□□□□ -0.6
SMARCE1-213ENST00000578044 SRSF7Q16629 238 aaKnown RBP eCLIP11.28□□□□□ -0.6
SMARCE1-213ENST00000578044 ZNF562Q6V9R5 426 aa11.28□□□□□ -0.6
SMARCE1-213ENST00000578044 OR11H1Q8NG94 326 aa11.28□□□□□ -0.6
SMARCE1-213ENST00000578044 IL1F10Q8WWZ1 152 aa11.28□□□□□ -0.6
SMARCE1-213ENST00000578044 Q9N2K0 584 aa11.28□□□□□ -0.6
SMARCE1-213ENST00000578044 A0A0A6YYD4 124 aa11.27□□□□□ -0.61
SMARCE1-213ENST00000578044 TRAV1-2A0A0B4J238 106 aa11.27□□□□□ -0.61
SMARCE1-213ENST00000578044 SEC14L6B5MCN3 397 aa11.27□□□□□ -0.61
SMARCE1-213ENST00000578044 SOCS1O15524 211 aa11.27□□□□□ -0.61
SMARCE1-213ENST00000578044 TBCEQ15813 527 aaPredicted RBP11.27□□□□□ -0.61
SMARCE1-213ENST00000578044 RAB11BQ15907 218 aa11.27□□□□□ -0.61
SMARCE1-213ENST00000578044 ZNF429Q86V71 674 aa11.27□□□□□ -0.61
SMARCE1-213ENST00000578044 RITA1Q96K30 269 aa11.27□□□□□ -0.61
SMARCE1-213ENST00000578044 GFI1Q99684 422 aa11.27□□□□□ -0.61
SMARCE1-213ENST00000578044 MGLLQ99685 303 aa11.27□□□□□ -0.61
SMARCE1-213ENST00000578044 PLGRKTQ9HBL7 147 aa11.27□□□□□ -0.61
SMARCE1-213ENST00000578044 CHMP1AQ9HD42 196 aaPredicted RBP11.27□□□□□ -0.61
SMARCE1-213ENST00000578044 AK3Q9UIJ7 227 aa11.27□□□□□ -0.61
SMARCE1-213ENST00000578044 FOXA2Q9Y261 457 aaPredicted RBP11.27□□□□□ -0.61
SMARCE1-213ENST00000578044 MRPS14O60783 128 aaKnown RBP11.26□□□□□ -0.61
SMARCE1-213ENST00000578044 CEACAM6P40199 344 aa11.26□□□□□ -0.61
SMARCE1-213ENST00000578044 AQP4P55087 323 aa11.26□□□□□ -0.61
SMARCE1-213ENST00000578044 CX3CL1P78423 397 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms