RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 KCTD12Q96CX2 325 aaKnown RBP12.73□□□□□ -0.37
VAPA-204ENST00000577901 KCNK7Q9Y2U2 307 aa12.73□□□□□ -0.37
VAPA-204ENST00000577901 NOTCH3Q9UM47 2321 aa12.73□□□□□ -0.37
VAPA-204ENST00000577901 TRDCB7Z8K6 153 aa12.72□□□□□ -0.37
VAPA-204ENST00000577901 MFNGO00587 321 aa12.72□□□□□ -0.37
VAPA-204ENST00000577901 HSPA12AO43301 675 aa12.72□□□□□ -0.37
VAPA-204ENST00000577901 IGKV1D-33P01593 117 aa12.72□□□□□ -0.37
VAPA-204ENST00000577901 IGKV1-33P01594 117 aa12.72□□□□□ -0.37
VAPA-204ENST00000577901 SNRPBP14678 240 aaKnown RBP12.72□□□□□ -0.37
VAPA-204ENST00000577901 HIST1H1DP16402 221 aaKnown RBP12.72□□□□□ -0.37
VAPA-204ENST00000577901 TALDO1P37837 337 aa12.72□□□□□ -0.37
VAPA-204ENST00000577901 ARFRP1Q13795 201 aa12.72□□□□□ -0.37
VAPA-204ENST00000577901 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.72□□□□□ -0.376e-7■■□□□ 13.2
VAPA-204ENST00000577901 K7EIL1 84 aa12.71□□□□□ -0.37
VAPA-204ENST00000577901 LANCL1O43813 399 aa12.71□□□□□ -0.37
VAPA-204ENST00000577901 SCTP09683 121 aa12.71□□□□□ -0.37
VAPA-204ENST00000577901 CD1BP29016 333 aa12.71□□□□□ -0.37
VAPA-204ENST00000577901 CEACAM6P40199 344 aa12.71□□□□□ -0.37
VAPA-204ENST00000577901 HNF4GQ14541 408 aa12.71□□□□□ -0.37
VAPA-204ENST00000577901 KIR2DS1Q14954 304 aa12.71□□□□□ -0.37
VAPA-204ENST00000577901 CENPVQ7Z7K6 275 aaPredicted RBP12.71□□□□□ -0.37
VAPA-204ENST00000577901 OR2T10Q8NGZ9 312 aa12.71□□□□□ -0.37
VAPA-204ENST00000577901 LGALS14Q8TCE9 139 aa12.71□□□□□ -0.37
VAPA-204ENST00000577901 GHITMQ9H3K2 345 aa12.71□□□□□ -0.37
VAPA-204ENST00000577901 PIPOXQ9P0Z9 390 aa12.71□□□□□ -0.37
VAPA-204ENST00000577901 SLC23A1Q9UHI7 598 aa12.71□□□□□ -0.37
VAPA-204ENST00000577901 MOB4Q9Y3A3 225 aa12.71□□□□□ -0.37
VAPA-204ENST00000577901 ETV7Q9Y603 341 aa12.71□□□□□ -0.37
VAPA-204ENST00000577901 IGHV3-72A0A0B4J1Y9 119 aa12.7□□□□□ -0.38
VAPA-204ENST00000577901 TCRBV4S1A1TA0A5B7 111 aa12.7□□□□□ -0.38
VAPA-204ENST00000577901 PF4P02776 101 aa12.7□□□□□ -0.38
VAPA-204ENST00000577901 SERPINB10P48595 397 aa12.7□□□□□ -0.38
VAPA-204ENST00000577901 LSM3P62310 102 aaKnown RBP12.7□□□□□ -0.38
VAPA-204ENST00000577901 EBI3Q14213 229 aa12.7□□□□□ -0.38
VAPA-204ENST00000577901 CDNFQ49AH0 187 aa12.7□□□□□ -0.38
VAPA-204ENST00000577901 ABCA11PQ4W5N1 156 aa12.7□□□□□ -0.38
VAPA-204ENST00000577901 TCTEX1D4Q5JR98 221 aa12.7□□□□□ -0.38
VAPA-204ENST00000577901 IZUMO1Q8IYV9 350 aa12.7□□□□□ -0.38
VAPA-204ENST00000577901 OR4A4PQ8NGN8 299 aa12.7□□□□□ -0.38
VAPA-204ENST00000577901 EDARADDQ8WWZ3 215 aa12.7□□□□□ -0.38
VAPA-204ENST00000577901 ITGB1BP1O14713 200 aa12.69□□□□□ -0.38
VAPA-204ENST00000577901 MOSP00540 346 aa12.69□□□□□ -0.38
VAPA-204ENST00000577901 FCGR3AP08637 254 aa12.69□□□□□ -0.38
VAPA-204ENST00000577901 PITPNAQ00169 270 aa12.69□□□□□ -0.38
VAPA-204ENST00000577901 SRSF7Q16629 238 aaKnown RBP eCLIP12.69□□□□□ -0.38
VAPA-204ENST00000577901 DEFB121Q5J5C9 76 aa12.69□□□□□ -0.38
VAPA-204ENST00000577901 DMRTA1Q5VZB9 504 aa12.69□□□□□ -0.38
VAPA-204ENST00000577901 C11orf87Q6NUJ2 197 aa12.69□□□□□ -0.38
VAPA-204ENST00000577901 ODF3L1Q8IXM7 274 aa12.69□□□□□ -0.38
VAPA-204ENST00000577901 RCC1LQ96I51 464 aaKnown RBP12.69□□□□□ -0.38
VAPA-204ENST00000577901 EAF1Q96JC9 268 aaPredicted RBP12.69□□□□□ -0.38
VAPA-204ENST00000577901 FUNDC2Q9BWH2 189 aa12.69□□□□□ -0.38
VAPA-204ENST00000577901 RHBDL2Q9NX52 303 aa12.69□□□□□ -0.38
VAPA-204ENST00000577901 TSSC4Q9Y5U2 329 aaPredicted RBP12.69□□□□□ -0.38
VAPA-204ENST00000577901 NCBP2LA6PVI3 153 aaKnown RBP12.68□□□□□ -0.38
VAPA-204ENST00000577901 RAB29O14966 203 aa12.68□□□□□ -0.38
VAPA-204ENST00000577901 ST8SIA5O15466 376 aa12.68□□□□□ -0.38
VAPA-204ENST00000577901 FABP7O15540 132 aa12.68□□□□□ -0.38
VAPA-204ENST00000577901 FGF16O43320 207 aa12.68□□□□□ -0.38
VAPA-204ENST00000577901 GSTP1P09211 210 aaKnown RBP12.68□□□□□ -0.38
VAPA-204ENST00000577901 TGFBR1P36897 503 aa12.68□□□□□ -0.38
VAPA-204ENST00000577901 RPS19P39019 145 aaKnown RBP12.68□□□□□ -0.38
VAPA-204ENST00000577901 KRTAP10-11P60412 298 aa12.68□□□□□ -0.38
VAPA-204ENST00000577901 C9orf152Q5JTZ5 239 aa12.68□□□□□ -0.38
VAPA-204ENST00000577901 HACD4Q5VWC8 232 aa12.68□□□□□ -0.38
VAPA-204ENST00000577901 FAM71F2Q6NXP2 309 aa12.68□□□□□ -0.38
VAPA-204ENST00000577901 ZNF833PQ6ZTB9 187 aa12.68□□□□□ -0.38
VAPA-204ENST00000577901 OR13F1Q8NGS4 319 aa12.68□□□□□ -0.38
VAPA-204ENST00000577901 OR5H6Q8NGV6 325 aa12.68□□□□□ -0.38
VAPA-204ENST00000577901 S1PR3Q99500 378 aa12.68□□□□□ -0.38
VAPA-204ENST00000577901 OR1A1Q9P1Q5 309 aa12.68□□□□□ -0.38
VAPA-204ENST00000577901 SPATA2Q9UM82 520 aa12.68□□□□□ -0.38
VAPA-204ENST00000577901 SAA2-SAA4A0A096LPE2 208 aa12.67□□□□□ -0.38
VAPA-204ENST00000577901 WI2-2373I1.2A0A1W2PRP0 233 aa12.67□□□□□ -0.38
VAPA-204ENST00000577901 AMY1AP04745 511 aa12.67□□□□□ -0.38
VAPA-204ENST00000577901 AMY2AP04746 511 aa12.67□□□□□ -0.38
VAPA-204ENST00000577901 GSTT2P0CG29 244 aa12.67□□□□□ -0.38
VAPA-204ENST00000577901 GSTT2BP0CG30 244 aa12.67□□□□□ -0.38
VAPA-204ENST00000577901 SAA2P0DJI9 122 aaPredicted RBP12.67□□□□□ -0.38
VAPA-204ENST00000577901 DTYMKP23919 212 aa12.67□□□□□ -0.38
VAPA-204ENST00000577901 PNLIPRP3Q17RR3 467 aa12.67□□□□□ -0.38
VAPA-204ENST00000577901 C5orf56Q8N8D9 126 aa12.67□□□□□ -0.38
VAPA-204ENST00000577901 OR4X2Q8NGF9 303 aa12.67□□□□□ -0.38
VAPA-204ENST00000577901 OR8H1Q8NGG4 311 aa12.67□□□□□ -0.38
VAPA-204ENST00000577901 OR10J5Q8NHC4 309 aa12.67□□□□□ -0.38
VAPA-204ENST00000577901 MRPS26Q9BYN8 205 aaKnown RBP12.67□□□□□ -0.38
VAPA-204ENST00000577901 C11orf54Q9H0W9 315 aaPredicted RBP12.67□□□□□ -0.38
VAPA-204ENST00000577901 IFI27L2Q9H2X8 130 aa12.67□□□□□ -0.38
VAPA-204ENST00000577901 DIABLOQ9NR28 239 aa12.67□□□□□ -0.38
VAPA-204ENST00000577901 ZNF230Q9UIE0 474 aaPredicted RBP12.67□□□□□ -0.38
VAPA-204ENST00000577901 A0A0A6YYH2 397 aa12.66□□□□□ -0.38
VAPA-204ENST00000577901 IGKV1-6A0A0C4DH72 117 aa12.66□□□□□ -0.38
VAPA-204ENST00000577901 A6NJ64 397 aa12.66□□□□□ -0.38
VAPA-204ENST00000577901 ZNF736B4DX44 427 aaPredicted RBP12.66□□□□□ -0.38
VAPA-204ENST00000577901 BET1O15155 118 aa12.66□□□□□ -0.38
VAPA-204ENST00000577901 DUS4LO95620 317 aaKnown RBP12.66□□□□□ -0.38
VAPA-204ENST00000577901 DIRAS3O95661 229 aa12.66□□□□□ -0.38
VAPA-204ENST00000577901 SMIM18P0DKX4 95 aa12.66□□□□□ -0.38
VAPA-204ENST00000577901 OR3A3P47888 321 aa12.66□□□□□ -0.38
VAPA-204ENST00000577901 GNG2P59768 71 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms