RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 HNF4GQ14541 408 aa15.38■□□□□ 0.05
SS18-208ENST00000577751 ABCA11PQ4W5N1 156 aa15.38■□□□□ 0.05
SS18-208ENST00000577751 FAM71F2Q6NXP2 309 aa15.38■□□□□ 0.05
SS18-208ENST00000577751 OR2T10Q8NGZ9 312 aa15.38■□□□□ 0.05
SS18-208ENST00000577751 WIPF2Q8TF74 440 aaPredicted RBP15.38■□□□□ 0.05
SS18-208ENST00000577751 EDARADDQ8WWZ3 215 aa15.38■□□□□ 0.05
SS18-208ENST00000577751 SLC25A46Q96AG3 418 aa15.38■□□□□ 0.05
SS18-208ENST00000577751 C11orf54Q9H0W9 315 aaPredicted RBP15.38■□□□□ 0.05
SS18-208ENST00000577751 RAB29O14966 203 aa15.37■□□□□ 0.05
SS18-208ENST00000577751 GABARAPO95166 117 aa15.37■□□□□ 0.05
SS18-208ENST00000577751 TALDO1P37837 337 aa15.37■□□□□ 0.05
SS18-208ENST00000577751 OR3A3P47888 321 aa15.37■□□□□ 0.05
SS18-208ENST00000577751 LSAMPQ13449 338 aa15.37■□□□□ 0.05
SS18-208ENST00000577751 CTF1Q16619 201 aa15.37■□□□□ 0.05
SS18-208ENST00000577751 PNLIPRP3Q17RR3 467 aa15.37■□□□□ 0.05
SS18-208ENST00000577751 IGSF11Q5DX21 431 aa15.37■□□□□ 0.05
SS18-208ENST00000577751 KLHDC1Q8N7A1 406 aa15.37■□□□□ 0.05
SS18-208ENST00000577751 C5orf56Q8N8D9 126 aa15.37■□□□□ 0.05
SS18-208ENST00000577751 MAFIPQ8WZ33 124 aa15.37■□□□□ 0.05
SS18-208ENST00000577751 NABP2Q9BQ15 211 aa15.37■□□□□ 0.05
SS18-208ENST00000577751 NAA50Q9GZZ1 169 aaKnown RBP15.37■□□□□ 0.05
SS18-208ENST00000577751 ABCG5Q9H222 651 aa15.37■□□□□ 0.05
SS18-208ENST00000577751 DCSTAMPQ9H295 470 aa15.37■□□□□ 0.05
SS18-208ENST00000577751 IGKV1D-8A0A087WSZ0 117 aa15.36■□□□□ 0.05
SS18-208ENST00000577751 TRBV6-7A0A0A0MS04 114 aa15.36■□□□□ 0.05
SS18-208ENST00000577751 TMEM235A6NFC5 223 aa15.36■□□□□ 0.05
SS18-208ENST00000577751 MOSP00540 346 aa15.36■□□□□ 0.05
SS18-208ENST00000577751 PRR31Q5SQ13 230 aa15.36■□□□□ 0.05
SS18-208ENST00000577751 PHF21AQ96BD5 680 aa15.36■□□□□ 0.05
SS18-208ENST00000577751 ABHD14BQ96IU4 210 aa15.36■□□□□ 0.05
SS18-208ENST00000577751 MRPL20Q9BYC9 149 aaKnown RBP15.36■□□□□ 0.05
SS18-208ENST00000577751 RDH8Q9NYR8 311 aa15.36■□□□□ 0.05
SS18-208ENST00000577751 TRAV18A0A075B6X5 111 aa15.35■□□□□ 0.05
SS18-208ENST00000577751 SH2D7A6NKC9 451 aaPredicted RBP15.35■□□□□ 0.05
SS18-208ENST00000577751 SSX5O60225 188 aa15.35■□□□□ 0.05
SS18-208ENST00000577751 PROP1O75360 226 aa15.35■□□□□ 0.05
SS18-208ENST00000577751 VSIG10L2P0DP72 767 aa15.35■□□□□ 0.05
SS18-208ENST00000577751 VDAC2P45880 294 aaPredicted RBP15.35■□□□□ 0.05
SS18-208ENST00000577751 TMEM95Q3KNT9 176 aa15.35■□□□□ 0.05
SS18-208ENST00000577751 GPR107Q5VW38 600 aa15.35■□□□□ 0.05
SS18-208ENST00000577751 NUDCD2Q8WVJ2 157 aa15.35■□□□□ 0.05
SS18-208ENST00000577751 KCTD12Q96CX2 325 aaKnown RBP15.35■□□□□ 0.05
SS18-208ENST00000577751 DIABLOQ9NR28 239 aa15.35■□□□□ 0.05
SS18-208ENST00000577751 PLSCR3Q9NRY6 295 aa15.35■□□□□ 0.05
SS18-208ENST00000577751 GNG2P59768 71 aa15.34■□□□□ 0.05
SS18-208ENST00000577751 RPL39P5Q59GN2 51 aa15.34■□□□□ 0.05
SS18-208ENST00000577751 Q8N9W7 124 aa15.34■□□□□ 0.05
SS18-208ENST00000577751 OR8H1Q8NGG4 311 aa15.34■□□□□ 0.05
SS18-208ENST00000577751 OR10J5Q8NHC4 309 aa15.34■□□□□ 0.05
SS18-208ENST00000577751 RBMXL1Q96E39 390 aaKnown RBP15.34■□□□□ 0.05
SS18-208ENST00000577751 S1PR3Q99500 378 aa15.34■□□□□ 0.05
SS18-208ENST00000577751 ST6GALNAC5Q9BVH7 336 aa15.34■□□□□ 0.05
SS18-208ENST00000577751 BET1O15155 118 aa15.33■□□□□ 0.04
SS18-208ENST00000577751 XRCC3O43542 346 aa15.33■□□□□ 0.04
SS18-208ENST00000577751 CT45A6P0DMU7 189 aa15.33■□□□□ 0.04
SS18-208ENST00000577751 CT45A5P0DMU8 189 aa15.33■□□□□ 0.04
SS18-208ENST00000577751 CT45A7P0DMV0 189 aa15.33■□□□□ 0.04
SS18-208ENST00000577751 ARSJQ5FYB0 599 aaPredicted RBP15.33■□□□□ 0.04
SS18-208ENST00000577751 UBE2NLQ5JXB2 153 aa15.33■□□□□ 0.04
SS18-208ENST00000577751 GPR141Q7Z602 305 aa15.33■□□□□ 0.04
SS18-208ENST00000577751 S100A16Q96FQ6 103 aaKnown RBP15.33■□□□□ 0.04
SS18-208ENST00000577751 AUNIPQ9H7T9 357 aa15.33■□□□□ 0.04
SS18-208ENST00000577751 GAB2Q9UQC2 676 aa15.33■□□□□ 0.04
SS18-208ENST00000577751 TRRAPQ9Y4A5 3859 aa15.33■□□□□ 0.04
SS18-208ENST00000577751 NCBP2LA6PVI3 153 aaKnown RBP15.32■□□□□ 0.04
SS18-208ENST00000577751 F2RL1P55085 397 aa15.32■□□□□ 0.04
SS18-208ENST00000577751 SAMD12Q8N8I0 201 aa15.32■□□□□ 0.04
SS18-208ENST00000577751 LIN7CQ9NUP9 197 aaKnown RBP15.32■□□□□ 0.04
SS18-208ENST00000577751 RNF150Q9ULK6 438 aa15.32■□□□□ 0.04
SS18-208ENST00000577751 TET2Q6N021 2002 aaPredicted RBP15.32■□□□□ 0.04
SS18-208ENST00000577751 PEX14O75381 377 aa15.31■□□□□ 0.04
SS18-208ENST00000577751 IGHG2P01859 326 aa15.31■□□□□ 0.04
SS18-208ENST00000577751 C9orf152Q5JTZ5 239 aa15.31■□□□□ 0.04
SS18-208ENST00000577751 H1FOOQ8IZA3 346 aaPredicted RBP15.31■□□□□ 0.04
SS18-208ENST00000577751 FAM71E2Q8N5Q1 922 aa15.31■□□□□ 0.04
SS18-208ENST00000577751 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.31■□□□□ 0.04
SS18-208ENST00000577751 OR5AN1Q8NGI8 311 aa15.31■□□□□ 0.04
SS18-208ENST00000577751 RITA1Q96K30 269 aa15.31■□□□□ 0.04
SS18-208ENST00000577751 CMTM3Q96MX0 182 aa15.31■□□□□ 0.04
SS18-208ENST00000577751 ZNF221Q9UK13 617 aa15.31■□□□□ 0.04
SS18-208ENST00000577751 M0QZ24 198 aa15.3■□□□□ 0.04
SS18-208ENST00000577751 CTXN2P0C2S0 81 aa15.3■□□□□ 0.04
SS18-208ENST00000577751 OR8U9P0C7N5 309 aa15.3■□□□□ 0.04
SS18-208ENST00000577751 RORCP51449 518 aa15.3■□□□□ 0.04
SS18-208ENST00000577751 CNIH2Q6PI25 160 aa15.3■□□□□ 0.04
SS18-208ENST00000577751 FBN3Q75N90 2809 aa15.3■□□□□ 0.04
SS18-208ENST00000577751 C11orf44Q8N8P7 122 aa15.3■□□□□ 0.04
SS18-208ENST00000577751 OR8U1Q8NH10 309 aa15.3■□□□□ 0.04
SS18-208ENST00000577751 ACOT12Q8WYK0 555 aa15.3■□□□□ 0.04
SS18-208ENST00000577751 GINS4Q9BRT9 223 aa15.3■□□□□ 0.04
SS18-208ENST00000577751 ANXA10Q9UJ72 324 aa15.3■□□□□ 0.04
SS18-208ENST00000577751 OR5H14A6NHG9 310 aa15.29■□□□□ 0.04
SS18-208ENST00000577751 H0YJW9 148 aa15.29■□□□□ 0.04
SS18-208ENST00000577751 FBXO24O75426 580 aa15.29■□□□□ 0.04
SS18-208ENST00000577751 CD28P10747 220 aa15.29■□□□□ 0.04
SS18-208ENST00000577751 PTHLHP12272 177 aa15.29■□□□□ 0.04
SS18-208ENST00000577751 MC5RP33032 325 aa15.29■□□□□ 0.04
SS18-208ENST00000577751 GPR12P47775 334 aa15.29■□□□□ 0.04
SS18-208ENST00000577751 ACTBP60709 375 aa15.29■□□□□ 0.04
SS18-208ENST00000577751 HIST2H2BDQ6DRA6 164 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms