RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 KLHDC2Q9Y2U9 406 aa4.5□□□□□ -1.69
SMG6-219ENST00000575663 EXOSC1Q9Y3B2 195 aaKnown RBP4.5□□□□□ -1.69
SMG6-219ENST00000575663 TMEM14AQ9Y6G1 99 aa4.5□□□□□ -1.69
SMG6-219ENST00000575663 IGKV1-27A0A075B6S5 117 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 MEIKINA0A087WXM9 373 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 FAM90A10PA6NDY2 464 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 PTGES3LE9PB15 166 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 PRKYO43930 277 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 NDUFB8O95169 186 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 HLA-DRB1P01911 266 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 CD1AP06126 327 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 OR2T7P0C7T2 308 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 OCM2P0CE71 109 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 OCMP0CE72 109 aaPredicted RBP4.49□□□□□ -1.69
SMG6-219ENST00000575663 CALCBP10092 127 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 DBTP11182 482 aaKnown RBP4.49□□□□□ -1.69
SMG6-219ENST00000575663 MYL12AP19105 171 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 NPBWR2P48146 333 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 CD81P60033 236 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 SCN1BQ07699 218 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 DYRK1AQ13627 763 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 HES5Q5TA89 166 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 TMEM236Q5W0B7 351 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 XAF1Q6GPH4 301 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 TMPRSS11AQ6ZMR5 421 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 LINC00322Q6ZN03 302 aaPredicted RBP4.49□□□□□ -1.69
SMG6-219ENST00000575663 UTS2BQ765I0 119 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 ZNF367Q7RTV3 350 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 LAX1Q8IWV1 398 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 LINC00518Q8N0U6 118 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 ACBD7Q8N6N7 88 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 TMEM104Q8NE00 496 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 DNAAF1Q8NEP3 725 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 OR13F1Q8NGS4 319 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 OR2K2Q8NGT1 345 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 OR52N1Q8NH53 320 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 CNIH3Q8TBE1 160 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 RAB2BQ8WUD1 216 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 GGHQ92820 318 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 MUL1Q969V5 352 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 NABP2Q9BQ15 211 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 THAP7Q9BT49 309 aaPredicted RBP4.49□□□□□ -1.69
SMG6-219ENST00000575663 MND1Q9BWT6 205 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 BARHL1Q9BZE3 327 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 COMMD4Q9H0A8 199 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 PPIL3Q9H2H8 161 aaKnown RBP4.49□□□□□ -1.69
SMG6-219ENST00000575663 SRD5A3Q9H8P0 318 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 TREM1Q9NP99 234 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 ACOT13Q9NPJ3 140 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 OR52A1Q9UKL2 312 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 DHDHQ9UQ10 334 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 FOXA2Q9Y261 457 aaPredicted RBP4.49□□□□□ -1.69
SMG6-219ENST00000575663 R4GMQ9 66 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 SORL1Q92673 2214 aa4.49□□□□□ -1.69
SMG6-219ENST00000575663 A0A1W2PPE3 182 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 J3QRE1 110 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 SLC33A1O00400 549 aaPredicted RBP4.48□□□□□ -1.69
SMG6-219ENST00000575663 HSPB6O14558 160 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 SYT7O43581 403 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 IGHV3-11P01762 117 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 HTR1AP08908 422 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 STAG3L3P0CL85 134 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 CCL1P22362 96 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 SLC2A5P22732 501 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 PSMA1P25786 263 aaKnown RBP4.48□□□□□ -1.69
SMG6-219ENST00000575663 SSTR5P35346 364 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 EIF2B2P49770 351 aaKnown RBP4.48□□□□□ -1.69
SMG6-219ENST00000575663 F2RL1P55085 397 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 TPPP2P59282 170 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 TAS2R43P59537 309 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 ROM1Q03395 351 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 SPHARQ15513 63 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 TRAM1Q15629 374 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 UBE2V2Q15819 145 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 SLC25A24Q6NUK1 477 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 AHSA2Q719I0 299 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 CPOQ8IVL8 374 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 ELMOD2Q8IZ81 293 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 SYS1Q8N2H4 156 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 TMEM217Q8N7C4 229 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 NANOGP1Q8N7R0 232 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 MINDY2Q8NBR6 621 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 CCDC54Q8NEL0 328 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 BBS1Q8NFJ9 593 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 OR51T1Q8NGJ9 327 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 OR9G4Q8NGQ1 327 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 OR13A1Q8NGR1 328 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 MRGPRDQ8TDS7 321 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 PP6455Q8WZ26 134 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 THRSPQ92748 146 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 C10orf35Q96D05 121 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 SPACA5Q96QH8 159 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 NEURL2Q9BR09 285 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 ZNF251Q9BRH9 671 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 TTTY10Q9BZA0 68 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 SLA2Q9H6Q3 261 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 LINC00574Q9H8X3 128 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 RHOFQ9HBH0 211 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 RANGRFQ9HD47 186 aaPredicted RBP4.48□□□□□ -1.69
SMG6-219ENST00000575663 TPSG1Q9NRR2 321 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms