RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 SPCS2Q15005 226 aa10.82□□□□□ -0.68
CIITA-210ENST00000575513 CDNFQ49AH0 187 aa10.82□□□□□ -0.68
CIITA-210ENST00000575513 FBLN7Q53RD9 439 aa10.82□□□□□ -0.68
CIITA-210ENST00000575513 UBE2NLQ5JXB2 153 aa10.82□□□□□ -0.68
CIITA-210ENST00000575513 ZNF833PQ6ZTB9 187 aa10.82□□□□□ -0.68
CIITA-210ENST00000575513 C5orf24Q7Z6I8 188 aa10.82□□□□□ -0.68
CIITA-210ENST00000575513 Q8N6K4 173 aa10.82□□□□□ -0.68
CIITA-210ENST00000575513 KLHDC1Q8N7A1 406 aa10.82□□□□□ -0.68
CIITA-210ENST00000575513 AP3S1Q92572 193 aa10.82□□□□□ -0.68
CIITA-210ENST00000575513 ISOC1Q96CN7 298 aa10.82□□□□□ -0.68
CIITA-210ENST00000575513 EAF1Q96JC9 268 aaPredicted RBP10.82□□□□□ -0.68
CIITA-210ENST00000575513 AGMATQ9BSE5 352 aa10.82□□□□□ -0.68
CIITA-210ENST00000575513 DIABLOQ9NR28 239 aa10.82□□□□□ -0.68
CIITA-210ENST00000575513 MGAM2Q2M2H8 2515 aa10.81□□□□□ -0.68
CIITA-210ENST00000575513 HSPA12AO43301 675 aa10.81□□□□□ -0.68
CIITA-210ENST00000575513 PEX14O75381 377 aa10.81□□□□□ -0.68
CIITA-210ENST00000575513 MOSP00540 346 aa10.81□□□□□ -0.68
CIITA-210ENST00000575513 FCGR3AP08637 254 aa10.81□□□□□ -0.68
CIITA-210ENST00000575513 SCTP09683 121 aa10.81□□□□□ -0.68
CIITA-210ENST00000575513 DTYMKP23919 212 aa10.81□□□□□ -0.68
CIITA-210ENST00000575513 TALDO1P37837 337 aa10.81□□□□□ -0.68
CIITA-210ENST00000575513 PNLIPRP3Q17RR3 467 aa10.81□□□□□ -0.68
CIITA-210ENST00000575513 ZNF260Q3ZCT1 412 aa10.81□□□□□ -0.68
CIITA-210ENST00000575513 ABCA11PQ4W5N1 156 aa10.81□□□□□ -0.68
CIITA-210ENST00000575513 HACD4Q5VWC8 232 aa10.81□□□□□ -0.68
CIITA-210ENST00000575513 MZT2AQ6P582 158 aa10.81□□□□□ -0.68
CIITA-210ENST00000575513 Q6ZS46 218 aa10.81□□□□□ -0.68
CIITA-210ENST00000575513 SAMD12Q8N8I0 201 aa10.81□□□□□ -0.68
CIITA-210ENST00000575513 PHF21AQ96BD5 680 aa10.81□□□□□ -0.68
CIITA-210ENST00000575513 S1PR3Q99500 378 aa10.81□□□□□ -0.68
CIITA-210ENST00000575513 IFI27L2Q9H2X8 130 aa10.81□□□□□ -0.68
CIITA-210ENST00000575513 NBEAL1Q6ZS30 2694 aa10.8□□□□□ -0.68
CIITA-210ENST00000575513 TRAV18A0A075B6X5 111 aa10.8□□□□□ -0.68
CIITA-210ENST00000575513 H3BMQ9 156 aa10.8□□□□□ -0.68
CIITA-210ENST00000575513 ZNF701M0R085 212 aaPredicted RBP10.8□□□□□ -0.68
CIITA-210ENST00000575513 FABP7O15540 132 aa10.8□□□□□ -0.68
CIITA-210ENST00000575513 APOA1P02647 267 aa10.8□□□□□ -0.68
CIITA-210ENST00000575513 VSIG10L2P0DP72 767 aa10.8□□□□□ -0.68
CIITA-210ENST00000575513 ARFRP1Q13795 201 aa10.8□□□□□ -0.68
CIITA-210ENST00000575513 HNF4GQ14541 408 aa10.8□□□□□ -0.68
CIITA-210ENST00000575513 ARSJQ5FYB0 599 aaPredicted RBP10.8□□□□□ -0.68
CIITA-210ENST00000575513 C5orf56Q8N8D9 126 aa10.8□□□□□ -0.68
CIITA-210ENST00000575513 DYNC2LI1Q8TCX1 351 aa10.8□□□□□ -0.68
CIITA-210ENST00000575513 S100A16Q96FQ6 103 aaKnown RBP10.8□□□□□ -0.68
CIITA-210ENST00000575513 CABLES2Q9BTV7 478 aa10.8□□□□□ -0.68
CIITA-210ENST00000575513 C11orf54Q9H0W9 315 aaPredicted RBP10.8□□□□□ -0.68
CIITA-210ENST00000575513 RBM38Q9H0Z9 239 aaKnown RBP10.8□□□□□ -0.68
CIITA-210ENST00000575513 CCDC59Q9P031 241 aaKnown RBP10.8□□□□□ -0.68
CIITA-210ENST00000575513 PKD1L1Q8TDX9 2849 aa10.79□□□□□ -0.68
CIITA-210ENST00000575513 A0A075B6Q4 140 aa10.79□□□□□ -0.68
CIITA-210ENST00000575513 SAA2-SAA4A0A096LPE2 208 aa10.79□□□□□ -0.68
CIITA-210ENST00000575513 TRBV6-7A0A0A0MS04 114 aa10.79□□□□□ -0.68
CIITA-210ENST00000575513 IGHV3-72A0A0B4J1Y9 119 aa10.79□□□□□ -0.68
CIITA-210ENST00000575513 IGKV1-6A0A0C4DH72 117 aa10.79□□□□□ -0.68
CIITA-210ENST00000575513 TMEM235A6NFC5 223 aa10.79□□□□□ -0.68
CIITA-210ENST00000575513 XRCC3O43542 346 aa10.79□□□□□ -0.68
CIITA-210ENST00000575513 SAA2P0DJI9 122 aaPredicted RBP10.79□□□□□ -0.68
CIITA-210ENST00000575513 SOX6P35712 828 aa10.79□□□□□ -0.68
CIITA-210ENST00000575513 LSAMPQ13449 338 aa10.79□□□□□ -0.68
CIITA-210ENST00000575513 NABP2Q9BQ15 211 aa10.79□□□□□ -0.68
CIITA-210ENST00000575513 ZNF251Q9BRH9 671 aa10.79□□□□□ -0.68
CIITA-210ENST00000575513 AUNIPQ9H7T9 357 aa10.79□□□□□ -0.68
CIITA-210ENST00000575513 PLSCR3Q9NRY6 295 aa10.79□□□□□ -0.68
CIITA-210ENST00000575513 OR1A1Q9P1Q5 309 aa10.79□□□□□ -0.68
CIITA-210ENST00000575513 COMMD3Q9UBI1 195 aa10.79□□□□□ -0.68
CIITA-210ENST00000575513 GAB2Q9UQC2 676 aa10.79□□□□□ -0.68
CIITA-210ENST00000575513 NCBP2LA6PVI3 153 aaKnown RBP10.78□□□□□ -0.68
CIITA-210ENST00000575513 ZNF736B4DX44 427 aaPredicted RBP10.78□□□□□ -0.68
CIITA-210ENST00000575513 ST8SIA5O15466 376 aa10.78□□□□□ -0.68
CIITA-210ENST00000575513 IGHG2P01859 326 aa10.78□□□□□ -0.68
CIITA-210ENST00000575513 CTXN2P0C2S0 81 aa10.78□□□□□ -0.68
CIITA-210ENST00000575513 GSTT2P0CG29 244 aa10.78□□□□□ -0.68
CIITA-210ENST00000575513 GSTT2BP0CG30 244 aa10.78□□□□□ -0.68
CIITA-210ENST00000575513 MC5RP33032 325 aa10.78□□□□□ -0.68
CIITA-210ENST00000575513 OR3A3P47888 321 aa10.78□□□□□ -0.68
CIITA-210ENST00000575513 C2orf68Q2NKX9 166 aa10.78□□□□□ -0.68
CIITA-210ENST00000575513 TREML4Q6UXN2 200 aa10.78□□□□□ -0.68
CIITA-210ENST00000575513 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.78□□□□□ -0.68
CIITA-210ENST00000575513 OR10J5Q8NHC4 309 aa10.78□□□□□ -0.68
CIITA-210ENST00000575513 LIN7CQ9NUP9 197 aaKnown RBP10.78□□□□□ -0.68
CIITA-210ENST00000575513 RDH8Q9NYR8 311 aa10.78□□□□□ -0.68
CIITA-210ENST00000575513 ZNF230Q9UIE0 474 aaPredicted RBP10.78□□□□□ -0.68
CIITA-210ENST00000575513 ELF5Q9UKW6 265 aaPredicted RBP10.78□□□□□ -0.68
CIITA-210ENST00000575513 SMIM31A0A1B0GVY4 71 aa10.77□□□□□ -0.69
CIITA-210ENST00000575513 OR5H14A6NHG9 310 aa10.77□□□□□ -0.69
CIITA-210ENST00000575513 SSX5O60225 188 aa10.77□□□□□ -0.69
CIITA-210ENST00000575513 FBXO24O75426 580 aa10.77□□□□□ -0.69
CIITA-210ENST00000575513 TPPPO94811 219 aa10.77□□□□□ -0.69
CIITA-210ENST00000575513 EIF4EP06730 217 aaKnown RBP10.77□□□□□ -0.69
CIITA-210ENST00000575513 CT45A6P0DMU7 189 aa10.77□□□□□ -0.69
CIITA-210ENST00000575513 CT45A5P0DMU8 189 aa10.77□□□□□ -0.69
CIITA-210ENST00000575513 CT45A7P0DMV0 189 aa10.77□□□□□ -0.69
CIITA-210ENST00000575513 GNG2P59768 71 aa10.77□□□□□ -0.69
CIITA-210ENST00000575513 IGSF11Q5DX21 431 aa10.77□□□□□ -0.69
CIITA-210ENST00000575513 CENPVQ7Z7K6 275 aaPredicted RBP10.77□□□□□ -0.69
CIITA-210ENST00000575513 Q8N9W7 124 aa10.77□□□□□ -0.69
CIITA-210ENST00000575513 OR5AU1Q8NGC0 362 aa10.77□□□□□ -0.69
CIITA-210ENST00000575513 NUDCD2Q8WVJ2 157 aa10.77□□□□□ -0.69
CIITA-210ENST00000575513 RNF5Q99942 180 aa10.77□□□□□ -0.69
CIITA-210ENST00000575513 MRPL20Q9BYC9 149 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms