RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 OR1A1Q9P1Q5 309 aa7.69□□□□□ -1.18
CCDC40-214ENST00000575431 EXTL2Q9UBQ6 330 aa7.69□□□□□ -1.18
CCDC40-214ENST00000575431 ZNF221Q9UK13 617 aa7.69□□□□□ -1.18
CCDC40-214ENST00000575431 MRPS7Q9Y2R9 242 aaKnown RBP7.69□□□□□ -1.18
CCDC40-214ENST00000575431 MMP24Q9Y5R2 645 aa7.69□□□□□ -1.18
CCDC40-214ENST00000575431 A3GALT2U3KPV4 340 aa7.69□□□□□ -1.18
CCDC40-214ENST00000575431 SETD2Q9BYW2 2564 aaPredicted RBP7.68□□□□□ -1.18
CCDC40-214ENST00000575431 BET1O15155 118 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 TSPAN9O75954 239 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 SLC22A5O76082 557 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 OR2F2O95006 317 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 PAX6P26367 422 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 MC5RP33032 325 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 TAS2R46P59540 309 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 ARPC4P59998 168 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 EBI3Q14213 229 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 FAM53AQ6NSI3 398 aaPredicted RBP7.68□□□□□ -1.18
CCDC40-214ENST00000575431 C11orf88Q6PI97 169 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 C5orf24Q7Z6I8 188 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 MOB3BQ86TA1 216 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 ODF3L1Q8IXM7 274 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 H1FOOQ8IZA3 346 aaPredicted RBP7.68□□□□□ -1.18
CCDC40-214ENST00000575431 DRAM1Q8N682 238 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 OR5AP2Q8NGF4 316 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 OR8H1Q8NGG4 311 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 OR4C13Q8NGP0 309 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 OR2T10Q8NGZ9 312 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 OR56B4Q8NH76 319 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 MCFD2Q8NI22 146 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 MAFIPQ8WZ33 124 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 CFHR4Q92496 578 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 MDFIQ99750 246 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 SLIRPQ9GZT3 109 aaKnown RBP7.68□□□□□ -1.18
CCDC40-214ENST00000575431 MMP27Q9H306 513 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 BEX1Q9HBH7 125 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 NECAP2Q9NVZ3 263 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 C1RLQ9NZP8 487 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 OR2W1Q9Y3N9 320 aa7.68□□□□□ -1.18
CCDC40-214ENST00000575431 RBM7Q9Y580 266 aaKnown RBP7.68□□□□□ -1.18
CCDC40-214ENST00000575431 ANK3Q12955 4377 aaKnown RBP7.67□□□□□ -1.18
CCDC40-214ENST00000575431 IGKV1D-8A0A087WSZ0 117 aa7.67□□□□□ -1.18
CCDC40-214ENST00000575431 SAA2-SAA4A0A096LPE2 208 aa7.67□□□□□ -1.18
CCDC40-214ENST00000575431 CTDSP2O14595 271 aa7.67□□□□□ -1.18
CCDC40-214ENST00000575431 ST8SIA5O15466 376 aa7.67□□□□□ -1.18
CCDC40-214ENST00000575431 SNRNP70P08621 437 aaKnown RBP7.67□□□□□ -1.18
CCDC40-214ENST00000575431 SAA2P0DJI9 122 aaPredicted RBP7.67□□□□□ -1.18
CCDC40-214ENST00000575431 TMEM11P17152 192 aa7.67□□□□□ -1.18
CCDC40-214ENST00000575431 NAT1P18440 290 aa7.67□□□□□ -1.18
CCDC40-214ENST00000575431 GPR12P47775 334 aa7.67□□□□□ -1.18
CCDC40-214ENST00000575431 OR3A3P47888 321 aa7.67□□□□□ -1.18
CCDC40-214ENST00000575431 REG1BP48304 166 aa7.67□□□□□ -1.18
CCDC40-214ENST00000575431 RAG2P55895 527 aa7.67□□□□□ -1.18
CCDC40-214ENST00000575431 TAGLNQ01995 201 aaKnown RBP7.67□□□□□ -1.18
CCDC40-214ENST00000575431 DIAPH2-AS1Q14236 149 aa7.67□□□□□ -1.18
CCDC40-214ENST00000575431 PYHIN1Q6K0P9 492 aa7.67□□□□□ -1.18
CCDC40-214ENST00000575431 CCBE1Q6UXH8 406 aaPredicted RBP7.67□□□□□ -1.18
CCDC40-214ENST00000575431 C12orf54Q6X4T0 127 aa7.67□□□□□ -1.18
CCDC40-214ENST00000575431 GPX8Q8TED1 209 aa7.67□□□□□ -1.18
CCDC40-214ENST00000575431 DIRAS2Q96HU8 199 aa7.67□□□□□ -1.18
CCDC40-214ENST00000575431 RBM14Q96PK6 669 aaKnown RBP7.67□□□□□ -1.18
CCDC40-214ENST00000575431 PRSS22Q9GZN4 317 aa7.67□□□□□ -1.18
CCDC40-214ENST00000575431 C6orf62Q9GZU0 229 aaPredicted RBP7.67□□□□□ -1.18
CCDC40-214ENST00000575431 NXF2Q9GZY0 626 aaKnown RBP7.67□□□□□ -1.18
CCDC40-214ENST00000575431 C16orf95Q9H693 158 aa7.67□□□□□ -1.18
CCDC40-214ENST00000575431 ANAPC10Q9UM13 185 aa7.67□□□□□ -1.18
CCDC40-214ENST00000575431 JMJD1CQ15652 2540 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 CLPSL1A2RUU4 121 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 OR5H14A6NHG9 310 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 FGF16O43320 207 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 RBBP9O75884 186 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 MOSP00540 346 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 IGKV1D-33P01593 117 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 IGKV1-33P01594 117 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 OR8U9P0C7N5 309 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 OR5H8P0DN80 308 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 PTHLHP12272 177 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 S100A5P33763 92 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 LUMP51884 338 aaPredicted RBP7.66□□□□□ -1.18
CCDC40-214ENST00000575431 ACTBP60709 375 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 SSBP1Q04837 148 aaKnown RBP7.66□□□□□ -1.18
CCDC40-214ENST00000575431 LSAMPQ13449 338 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 HES1Q14469 280 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 CDK10Q15131 360 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 SNX29P2Q8IUI4 249 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 GVQW1Q8N7I0 195 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 OR8U1Q8NH10 309 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 OR2T6Q8NHC8 308 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 FCAMRQ8WWV6 532 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 BORCS5Q969J3 196 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 ABHD14BQ96IU4 210 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 ADTRPQ96IZ2 230 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 EAF1Q96JC9 268 aaPredicted RBP7.66□□□□□ -1.18
CCDC40-214ENST00000575431 NABP2Q9BQ15 211 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 ZNF251Q9BRH9 671 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 SLC25A33Q9BSK2 321 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 MIXL1Q9H2W2 232 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 MOB4Q9Y3A3 225 aa7.66□□□□□ -1.18
CCDC40-214ENST00000575431 NIPBLQ6KC79 2804 aaeCLIP7.65□□□□□ -1.18
CCDC40-214ENST00000575431 GABARAPH6UMI1 98 aa7.65□□□□□ -1.18
CCDC40-214ENST00000575431 CTDSPLO15194 276 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms