RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 RPS19P39019 145 aaKnown RBP6.84□□□□□ -1.31
SMG6-216ENST00000575176 MNDAP41218 407 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 VDAC2P45880 294 aaPredicted RBP6.84□□□□□ -1.31
SMG6-216ENST00000575176 SCAND1P57086 179 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 MXD1Q05195 221 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 CTF1Q16619 201 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 SRSF7Q16629 238 aaKnown RBP eCLIP6.84□□□□□ -1.31
SMG6-216ENST00000575176 MRGPRG-AS1Q2M3A8 158 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 ETV3LQ6ZN32 361 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 TGIF2LXQ8IUE1 241 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 LYG1Q8N1E2 194 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 NUDCD2Q8WVJ2 157 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 CAPSLQ8WWF8 208 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 GALMQ96C23 342 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 ABHD14BQ96IU4 210 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 NOL4LQ96MY1 436 aaPredicted RBP6.84□□□□□ -1.31
SMG6-216ENST00000575176 CMSS1Q9BQ75 279 aaKnown RBP6.84□□□□□ -1.31
SMG6-216ENST00000575176 C11orf54Q9H0W9 315 aaPredicted RBP6.84□□□□□ -1.31
SMG6-216ENST00000575176 RIMS4Q9H426 269 aaPredicted RBP6.84□□□□□ -1.31
SMG6-216ENST00000575176 RHBDL2Q9NX52 303 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 ZNF580Q9UK33 172 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 ANAPC10Q9UM13 185 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 SSR3Q9UNL2 185 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 TRDCB7Z8K6 153 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 H0YJW9 148 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 FABP7O15540 132 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 FBXO24O75426 580 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 MOSP00540 346 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 TFAP2AP05549 437 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 GSTT2P0CG29 244 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 GSTT2BP0CG30 244 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 FAM106CPP0CH98 169 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 VSIG10L2P0DP72 767 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 PTHLHP12272 177 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 GPR12P47775 334 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 ALDH3B2P48448 385 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 NCS1P62166 190 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 EIF4EBP1Q13541 118 aaPredicted RBP6.83□□□□□ -1.32
SMG6-216ENST00000575176 HACD4Q5VWC8 232 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 FAM131AQ6UXB0 335 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 H1FOOQ8IZA3 346 aaPredicted RBP6.83□□□□□ -1.32
SMG6-216ENST00000575176 RNF152Q8N8N0 203 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 ZNF383Q8NA42 475 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 OR2AK2Q8NG84 335 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 OR5AN1Q8NGI8 311 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 OR4A4PQ8NGN8 299 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 MYOZ3Q8TDC0 251 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 IL1F10Q8WWZ1 152 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 DDB2Q92466 427 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 SNAPC3Q92966 411 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 S1PR3Q99500 378 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 FUNDC2Q9BWH2 189 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 ABCG5Q9H222 651 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 MMP27Q9H306 513 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 LIN7CQ9NUP9 197 aaKnown RBP6.83□□□□□ -1.32
SMG6-216ENST00000575176 RDH8Q9NYR8 311 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 KCNIP1Q9NZI2 227 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 FBXO7Q9Y3I1 522 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 ETV7Q9Y603 341 aa6.83□□□□□ -1.32
SMG6-216ENST00000575176 M0QZK8 103 aa6.82□□□□□ -1.32
SMG6-216ENST00000575176 KCNAB3O43448 404 aa6.82□□□□□ -1.32
SMG6-216ENST00000575176 AIREO43918 545 aa6.82□□□□□ -1.32
SMG6-216ENST00000575176 TUSC2O75896 110 aa6.82□□□□□ -1.32
SMG6-216ENST00000575176 IGKV1-16P04430 117 aa6.82□□□□□ -1.32
SMG6-216ENST00000575176 DTYMKP23919 212 aa6.82□□□□□ -1.32
SMG6-216ENST00000575176 IL3RAP26951 378 aa6.82□□□□□ -1.32
SMG6-216ENST00000575176 ARHGDIBP52566 201 aa6.82□□□□□ -1.32
SMG6-216ENST00000575176 HNF4GQ14541 408 aa6.82□□□□□ -1.32
SMG6-216ENST00000575176 C2orf68Q2NKX9 166 aa6.82□□□□□ -1.32
SMG6-216ENST00000575176 GLDNQ6ZMI3 551 aaPredicted RBP6.82□□□□□ -1.32
SMG6-216ENST00000575176 C18orf65Q6ZTR6 163 aa6.82□□□□□ -1.32
SMG6-216ENST00000575176 MOB3BQ86TA1 216 aa6.82□□□□□ -1.32
SMG6-216ENST00000575176 NDUFA11Q86Y39 141 aa6.82□□□□□ -1.32
SMG6-216ENST00000575176 NPBQ8NG41 125 aa6.82□□□□□ -1.32
SMG6-216ENST00000575176 OR2T10Q8NGZ9 312 aa6.82□□□□□ -1.32
SMG6-216ENST00000575176 SETD6Q8TBK2 473 aa6.82□□□□□ -1.32
SMG6-216ENST00000575176 SLC25A46Q96AG3 418 aa6.82□□□□□ -1.32
SMG6-216ENST00000575176 AKR1E2Q96JD6 320 aa6.82□□□□□ -1.32
SMG6-216ENST00000575176 CHMP1AQ9HD42 196 aaPredicted RBP6.82□□□□□ -1.32
SMG6-216ENST00000575176 RAB9BQ9NP90 201 aa6.82□□□□□ -1.32
SMG6-216ENST00000575176 TPSG1Q9NRR2 321 aa6.82□□□□□ -1.32
SMG6-216ENST00000575176 MGAT4AQ9UM21 535 aa6.82□□□□□ -1.32
SMG6-216ENST00000575176 SPATA2Q9UM82 520 aa6.82□□□□□ -1.32
SMG6-216ENST00000575176 A0A075B6Q4 140 aa6.81□□□□□ -1.32
SMG6-216ENST00000575176 IGHV7-81A0A0B4J1V7 117 aa6.81□□□□□ -1.32
SMG6-216ENST00000575176 IGKV1D-13A0A0B4J2D9 117 aa6.81□□□□□ -1.32
SMG6-216ENST00000575176 M0QZ24 198 aa6.81□□□□□ -1.32
SMG6-216ENST00000575176 WIPF1O43516 503 aa6.81□□□□□ -1.32
SMG6-216ENST00000575176 RGS11O94810 467 aa6.81□□□□□ -1.32
SMG6-216ENST00000575176 IGLV2-23P01705 113 aa6.81□□□□□ -1.32
SMG6-216ENST00000575176 HLA-DRB1P01911 266 aa6.81□□□□□ -1.32
SMG6-216ENST00000575176 IGF1P05019 195 aa6.81□□□□□ -1.32
SMG6-216ENST00000575176 GSTP1P09211 210 aaKnown RBP6.81□□□□□ -1.32
SMG6-216ENST00000575176 IGKV1-13P0DP09 117 aa6.81□□□□□ -1.32
SMG6-216ENST00000575176 EGR2P11161 476 aaPredicted RBP6.81□□□□□ -1.32
SMG6-216ENST00000575176 ZBTB25P24278 435 aa6.81□□□□□ -1.32
SMG6-216ENST00000575176 CRIP2P52943 208 aaPredicted RBP6.81□□□□□ -1.32
SMG6-216ENST00000575176 BRWD1-AS2P59051 145 aa6.81□□□□□ -1.32
SMG6-216ENST00000575176 ACTBP60709 375 aa6.81□□□□□ -1.32
SMG6-216ENST00000575176 LSM3P62310 102 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms