RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 TCTEX1D1Q8N7M0 179 aa8.21□□□□□ -1.1
CCDC40-212ENST00000574799 GATAD1Q8WUU5 269 aa8.21□□□□□ -1.1
CCDC40-212ENST00000574799 WDYHV1Q96HA8 205 aa8.21□□□□□ -1.1
CCDC40-212ENST00000574799 PPP1R3CQ9UQK1 317 aa8.21□□□□□ -1.1
CCDC40-212ENST00000574799 KRASP01116 189 aa8.21□□□□□ -1.1
CCDC40-212ENST00000574799 GLB1P16278 677 aa8.21□□□□□ -1.1
CCDC40-212ENST00000574799 CDKN1AP38936 164 aa8.21□□□□□ -1.1
CCDC40-212ENST00000574799 IER3P46695 156 aa8.21□□□□□ -1.1
CCDC40-212ENST00000574799 TGFBR3Q03167 851 aa8.21□□□□□ -1.1
CCDC40-212ENST00000574799 MAJINQ3KP22 176 aa8.21□□□□□ -1.1
CCDC40-212ENST00000574799 WDR74Q6RFH5 385 aaPredicted RBP8.21□□□□□ -1.1
CCDC40-212ENST00000574799 ST6GALNAC3Q8NDV1 305 aa8.21□□□□□ -1.1
CCDC40-212ENST00000574799 TM2D1Q9BX74 207 aa8.21□□□□□ -1.1
CCDC40-212ENST00000574799 WNT10AQ9GZT5 417 aa8.21□□□□□ -1.1
CCDC40-212ENST00000574799 NAT8BQ9UHF3 227 aa8.21□□□□□ -1.1
CCDC40-212ENST00000574799 TIMM8BQ9Y5J9 83 aaPredicted RBP8.21□□□□□ -1.1
CCDC40-212ENST00000574799 AQP7P3A6NL99 342 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 C1QTNF9BB2RNN3 333 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 CBR3O75828 277 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 NDUFB4O95168 129 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 IL6RP08887 468 aaPredicted RBP8.2□□□□□ -1.1
CCDC40-212ENST00000574799 FBLP22087 321 aaKnown RBP8.2□□□□□ -1.1
CCDC40-212ENST00000574799 ADMP35318 185 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 TMPRSS7Q7RTY8 843 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 TMEM204Q9BSN7 226 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 AKIRIN1Q9H9L7 192 aaPredicted RBP8.2□□□□□ -1.1
CCDC40-212ENST00000574799 SLC35D1Q9NTN3 355 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 TRAV1-1A0A0B4J248 108 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 SNURFLB1AK76 121 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 TMEM250H0YL14 139 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 NUPR1O60356 82 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 WDR1O75083 606 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 ZNF818PQ6ZRF7 136 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 ZNF439Q8NDP4 499 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 NFAM1Q8NET5 270 aaPredicted RBP8.2□□□□□ -1.1
CCDC40-212ENST00000574799 UBALD1Q8TB05 177 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 RNF138Q8WVD3 245 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 ST8SIA1Q92185 356 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 SPSB1Q96BD6 273 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 C20orf144Q9BQM9 153 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 ULBP2Q9BZM5 246 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 SERTAD4Q9NUC0 356 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 RPH3ALQ9UNE2 315 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 TECTAO75443 2155 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 DIDO1Q9BTC0 2240 aaKnown RBP8.2□□□□□ -1.1
CCDC40-212ENST00000574799 FAM186AA6NE01 2351 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 PGPEP1LA6NFU8 196 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 RNF212BA8MTL3 300 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 LILRA1O75019 489 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 LCN2P80188 198 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 KIAA2026Q5HYC2 2103 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 SAP25Q8TEE9 199 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 ARHGAP21Q5T5U3 1957 aa8.2□□□□□ -1.1
CCDC40-212ENST00000574799 KNTC1P50748 2209 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 LOC102725191A0A1B0GVB3 256 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 ITGB1BP1O14713 200 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 TUSC2O75896 110 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 IGHMP01871 453 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 GUSBP11Q6P575 273 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 OR10G8Q8NGN5 311 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 GPR146Q96CH1 333 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 IGLV3-12A0A075B6K2 115 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 CTXND1A0A1B0GTU2 59 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 LIPT2A6NK58 231 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 CCL25O15444 150 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 NPIPB7O75200 414 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 ZNF253O75346 499 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 SCTP09683 121 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 ZNF17P17021 662 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 EXT1Q16394 746 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 KIAA1644Q3SXP7 199 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 LDLRAD2Q5SZI1 272 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 STPG4Q8N801 248 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 TAF15Q92804 592 aaKnown RBP eCLIP8.19□□□□□ -1.1
CCDC40-212ENST00000574799 CORO2AQ92828 525 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 MRPL18Q9H0U6 180 aaKnown RBP8.19□□□□□ -1.1
CCDC40-212ENST00000574799 GPR35Q9HC97 309 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 KIR2DS1A0A191URI9 304 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 DKK1O94907 266 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 C1QTNF9P0C862 333 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 PSG2P11465 335 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 KIR2DS4P43632 304 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 ID3Q02535 119 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 ZFP36L1Q07352 338 aaKnown RBP8.19□□□□□ -1.1
CCDC40-212ENST00000574799 KIR2DS1Q14954 304 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 HLA-DRB5Q30154 266 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 PHYHD1Q5SRE7 291 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 Q6ZWC4 215 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 MAFAQ8NHW3 353 aaPredicted RBP8.19□□□□□ -1.1
CCDC40-212ENST00000574799 RDH5Q92781 318 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 ERRFI1Q9UJM3 462 aaPredicted RBP8.19□□□□□ -1.1
CCDC40-212ENST00000574799 PILRBQ9UKJ0 227 aa8.19□□□□□ -1.1
CCDC40-212ENST00000574799 PIGBOS1A0A0B4J2F0 54 aa8.18□□□□□ -1.1
CCDC40-212ENST00000574799 GABRA2P47869 451 aa8.18□□□□□ -1.1
CCDC40-212ENST00000574799 PEAR1Q5VY43 1037 aaPredicted RBP8.18□□□□□ -1.1
CCDC40-212ENST00000574799 LHFPL2Q6ZUX7 228 aa8.18□□□□□ -1.1
CCDC40-212ENST00000574799 MBD3L1Q8WWY6 194 aa8.18□□□□□ -1.1
CCDC40-212ENST00000574799 AP1S3Q96PC3 154 aa8.18□□□□□ -1.1
CCDC40-212ENST00000574799 RNF2Q99496 336 aa8.18□□□□□ -1.1
CCDC40-212ENST00000574799 IGHV3-15A0A0B4J1V0 119 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms