RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 SLC7A6OSQ96CW6 309 aaPredicted RBP13.32□□□□□ -0.28
CCDC40-211ENST00000574099 IFI27L2Q9H2X8 130 aa13.32□□□□□ -0.28
CCDC40-211ENST00000574099 BANF2Q9H503 90 aa13.32□□□□□ -0.28
CCDC40-211ENST00000574099 MBNL3Q9NUK0 354 aaKnown RBP13.32□□□□□ -0.28
CCDC40-211ENST00000574099 METTL1Q9UBP6 276 aaKnown RBP13.32□□□□□ -0.28
CCDC40-211ENST00000574099 H7C2Y5 167 aa13.31□□□□□ -0.28
CCDC40-211ENST00000574099 YPEL1O60688 119 aa13.31□□□□□ -0.28
CCDC40-211ENST00000574099 FADS2O95864 444 aaKnown RBP13.31□□□□□ -0.28
CCDC40-211ENST00000574099 FCGR1AP12314 374 aa13.31□□□□□ -0.28
CCDC40-211ENST00000574099 CD81P60033 236 aa13.31□□□□□ -0.28
CCDC40-211ENST00000574099 RIPK1Q13546 671 aa13.31□□□□□ -0.28
CCDC40-211ENST00000574099 Q8N402 240 aa13.31□□□□□ -0.28
CCDC40-211ENST00000574099 MRPL30Q8TCC3 161 aaKnown RBP13.31□□□□□ -0.28
CCDC40-211ENST00000574099 YPEL2Q96QA6 119 aa13.31□□□□□ -0.28
CCDC40-211ENST00000574099 SC5DO75845 299 aa13.3□□□□□ -0.28
CCDC40-211ENST00000574099 CT45A6P0DMU7 189 aa13.3□□□□□ -0.28
CCDC40-211ENST00000574099 CT45A5P0DMU8 189 aa13.3□□□□□ -0.28
CCDC40-211ENST00000574099 CT45A7P0DMV0 189 aa13.3□□□□□ -0.28
CCDC40-211ENST00000574099 GPR176Q14439 515 aa13.3□□□□□ -0.28
CCDC40-211ENST00000574099 DMKNQ6E0U4 476 aaPredicted RBP13.3□□□□□ -0.28
CCDC40-211ENST00000574099 GLIPR1L1Q6UWM5 242 aa13.3□□□□□ -0.28
CCDC40-211ENST00000574099 LINC00322Q6ZN03 302 aaPredicted RBP13.3□□□□□ -0.28
CCDC40-211ENST00000574099 POC5Q8NA72 575 aa13.3□□□□□ -0.28
CCDC40-211ENST00000574099 OR5T1Q8NG75 326 aa13.3□□□□□ -0.28
CCDC40-211ENST00000574099 SELENOIQ9C0D9 397 aa13.3□□□□□ -0.28
CCDC40-211ENST00000574099 WFDC10AQ9H1F0 79 aa13.3□□□□□ -0.28
CCDC40-211ENST00000574099 HERC2O95714 4834 aa13.29□□□□□ -0.28
CCDC40-211ENST00000574099 OR5H14A6NHG9 310 aa13.29□□□□□ -0.28
CCDC40-211ENST00000574099 H0YJW9 148 aa13.29□□□□□ -0.28
CCDC40-211ENST00000574099 ATP8B1O43520 1251 aa13.29□□□□□ -0.28
CCDC40-211ENST00000574099 TRBV12-3P01733 135 aa13.29□□□□□ -0.28
CCDC40-211ENST00000574099 CSN3P07498 182 aa13.29□□□□□ -0.28
CCDC40-211ENST00000574099 HTD2P86397 168 aa13.29□□□□□ -0.28
CCDC40-211ENST00000574099 AWAT2Q6E213 333 aa13.29□□□□□ -0.28
CCDC40-211ENST00000574099 SIGIRRQ6IA17 410 aa13.29□□□□□ -0.28
CCDC40-211ENST00000574099 ZNF562Q6V9R5 426 aa13.29□□□□□ -0.28
CCDC40-211ENST00000574099 JAGN1Q8N5M9 183 aa13.29□□□□□ -0.28
CCDC40-211ENST00000574099 OR52I1Q8NGK6 324 aa13.29□□□□□ -0.28
CCDC40-211ENST00000574099 IL1F10Q8WWZ1 152 aa13.29□□□□□ -0.28
CCDC40-211ENST00000574099 DDB2Q92466 427 aa13.29□□□□□ -0.28
CCDC40-211ENST00000574099 GALMQ96C23 342 aa13.29□□□□□ -0.28
CCDC40-211ENST00000574099 CENPNQ96H22 339 aaPredicted RBP13.29□□□□□ -0.28
CCDC40-211ENST00000574099 WASHC3Q9Y3C0 194 aa13.29□□□□□ -0.28
CCDC40-211ENST00000574099 CA11O75493 328 aa13.28□□□□□ -0.28
CCDC40-211ENST00000574099 TPPPO94811 219 aa13.28□□□□□ -0.28
CCDC40-211ENST00000574099 BAG2O95816 211 aa13.28□□□□□ -0.28
CCDC40-211ENST00000574099 MGMTP16455 207 aa13.28□□□□□ -0.28
CCDC40-211ENST00000574099 IGFBP3P17936 291 aaPredicted RBP13.28□□□□□ -0.28
CCDC40-211ENST00000574099 FSTP19883 344 aa13.28□□□□□ -0.28
CCDC40-211ENST00000574099 FUT3P21217 361 aa13.28□□□□□ -0.28
CCDC40-211ENST00000574099 DYRK1AQ13627 763 aa13.28□□□□□ -0.28
CCDC40-211ENST00000574099 PMS2P11Q13670 270 aa13.28□□□□□ -0.28
CCDC40-211ENST00000574099 PSG5Q15238 335 aa13.28□□□□□ -0.28
CCDC40-211ENST00000574099 FAM71F2Q6NXP2 309 aa13.28□□□□□ -0.28
CCDC40-211ENST00000574099 RPL22L1Q6P5R6 122 aaKnown RBP13.28□□□□□ -0.28
CCDC40-211ENST00000574099 DEFB125Q8N687 156 aa13.28□□□□□ -0.28
CCDC40-211ENST00000574099 ABHD14BQ96IU4 210 aa13.28□□□□□ -0.28
CCDC40-211ENST00000574099 NEURL2Q9BR09 285 aa13.28□□□□□ -0.28
CCDC40-211ENST00000574099 PARP12Q9H0J9 701 aaKnown RBP13.28□□□□□ -0.28
CCDC40-211ENST00000574099 PIPOXQ9P0Z9 390 aa13.28□□□□□ -0.28
CCDC40-211ENST00000574099 ORC6Q9Y5N6 252 aa13.28□□□□□ -0.28
CCDC40-211ENST00000574099 TRAV8-7A0A075B6U6 113 aa13.27□□□□□ -0.29
CCDC40-211ENST00000574099 A0A0G2JLM5 398 aa13.27□□□□□ -0.29
CCDC40-211ENST00000574099 EI24O14681 340 aa13.27□□□□□ -0.29
CCDC40-211ENST00000574099 RAB29O14966 203 aa13.27□□□□□ -0.29
CCDC40-211ENST00000574099 SLC22A1O15245 554 aa13.27□□□□□ -0.29
CCDC40-211ENST00000574099 CRTAPO75718 401 aaPredicted RBP13.27□□□□□ -0.29
CCDC40-211ENST00000574099 ALPLP05186 524 aa13.27□□□□□ -0.29
CCDC40-211ENST00000574099 CD7P09564 240 aa13.27□□□□□ -0.29
CCDC40-211ENST00000574099 GABRB1P18505 474 aa13.27□□□□□ -0.29
CCDC40-211ENST00000574099 FXYD3Q14802 87 aa13.27□□□□□ -0.29
CCDC40-211ENST00000574099 ZNF554Q86TJ5 538 aa13.27□□□□□ -0.29
CCDC40-211ENST00000574099 STEAP1Q9UHE8 339 aa13.27□□□□□ -0.29
CCDC40-211ENST00000574099 RBBP9O75884 186 aa13.26□□□□□ -0.29
CCDC40-211ENST00000574099 LIMS3P0CW19 117 aa13.26□□□□□ -0.29
CCDC40-211ENST00000574099 LIMS4P0CW20 117 aa13.26□□□□□ -0.29
CCDC40-211ENST00000574099 MC5RP33032 325 aa13.26□□□□□ -0.29
CCDC40-211ENST00000574099 ALDH3A2P51648 485 aa13.26□□□□□ -0.29
CCDC40-211ENST00000574099 HMGN3Q15651 99 aa13.26□□□□□ -0.29
CCDC40-211ENST00000574099 RPEL1Q2QD12 228 aa13.26□□□□□ -0.29
CCDC40-211ENST00000574099 MOGAT2Q3SYC2 334 aa13.26□□□□□ -0.29
CCDC40-211ENST00000574099 LY6G6FQ5SQ64 297 aa13.26□□□□□ -0.29
CCDC40-211ENST00000574099 OR2G6Q5TZ20 316 aa13.26□□□□□ -0.29
CCDC40-211ENST00000574099 C1orf146Q5VVC0 180 aa13.26□□□□□ -0.29
CCDC40-211ENST00000574099 DRAXINQ8NBI3 349 aaPredicted RBP13.26□□□□□ -0.29
CCDC40-211ENST00000574099 FAM46BQ96A09 425 aa13.26□□□□□ -0.29
CCDC40-211ENST00000574099 Q96M66 194 aa13.26□□□□□ -0.29
CCDC40-211ENST00000574099 ST6GALNAC5Q9BVH7 336 aa13.26□□□□□ -0.29
CCDC40-211ENST00000574099 SRD5A3Q9H8P0 318 aa13.26□□□□□ -0.29
CCDC40-211ENST00000574099 ABRACLQ9P1F3 81 aa13.26□□□□□ -0.29
CCDC40-211ENST00000574099 CKLFQ9UBR5 152 aa13.26□□□□□ -0.29
CCDC40-211ENST00000574099 PEF1Q9UBV8 284 aaKnown RBP13.26□□□□□ -0.29
CCDC40-211ENST00000574099 SLC23A1Q9UHI7 598 aa13.26□□□□□ -0.29
CCDC40-211ENST00000574099 GMPPBQ9Y5P6 360 aa13.26□□□□□ -0.29
CCDC40-211ENST00000574099 CXorf65A6NEN9 183 aa13.25□□□□□ -0.29
CCDC40-211ENST00000574099 FAM90A7PA6NKC0 464 aa13.25□□□□□ -0.29
CCDC40-211ENST00000574099 FAM90A23PA8MXZ1 464 aa13.25□□□□□ -0.29
CCDC40-211ENST00000574099 H3BUA1 57 aa13.25□□□□□ -0.29
CCDC40-211ENST00000574099 PDCD6O75340 191 aa13.25□□□□□ -0.29
CCDC40-211ENST00000574099 CNIH1O95406 144 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms