RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 PLGRKTQ9HBL7 147 aa13.64□□□□□ -0.23
SMG6-214ENST00000573827 SLC23A1Q9UHI7 598 aa13.64□□□□□ -0.23
SMG6-214ENST00000573827 KCNK7Q9Y2U2 307 aa13.64□□□□□ -0.23
SMG6-214ENST00000573827 TMEM272A0A1B0GTI8 110 aa13.63□□□□□ -0.23
SMG6-214ENST00000573827 ERICH4A6NGS2 130 aa13.63□□□□□ -0.23
SMG6-214ENST00000573827 HLA-DRB1P01911 266 aa13.63□□□□□ -0.23
SMG6-214ENST00000573827 CT45A6P0DMU7 189 aa13.63□□□□□ -0.23
SMG6-214ENST00000573827 CT45A5P0DMU8 189 aa13.63□□□□□ -0.23
SMG6-214ENST00000573827 CT45A7P0DMV0 189 aa13.63□□□□□ -0.23
SMG6-214ENST00000573827 SLC2A2P11168 524 aaPredicted RBP13.63□□□□□ -0.23
SMG6-214ENST00000573827 PSMB8P28062 276 aa13.63□□□□□ -0.23
SMG6-214ENST00000573827 PPIFP30405 207 aaKnown RBP13.63□□□□□ -0.23
SMG6-214ENST00000573827 MYCNOSP40205 109 aa13.63□□□□□ -0.23
SMG6-214ENST00000573827 RPL39P5Q59GN2 51 aa13.63□□□□□ -0.23
SMG6-214ENST00000573827 NR2C2APQ86WQ0 139 aa13.63□□□□□ -0.23
SMG6-214ENST00000573827 ZNF695Q8IW36 515 aa13.63□□□□□ -0.23
SMG6-214ENST00000573827 KLHL30-AS1Q8NEE0 82 aa13.63□□□□□ -0.23
SMG6-214ENST00000573827 MRAPQ8TCY5 172 aa13.63□□□□□ -0.23
SMG6-214ENST00000573827 IL1F10Q8WWZ1 152 aa13.63□□□□□ -0.23
SMG6-214ENST00000573827 URM1Q9BTM9 101 aaKnown RBP13.63□□□□□ -0.23
SMG6-214ENST00000573827 PECRQ9BY49 303 aa13.63□□□□□ -0.23
SMG6-214ENST00000573827 Q9N2K0 584 aa13.63□□□□□ -0.23
SMG6-214ENST00000573827 NDUFB11Q9NX14 153 aa13.63□□□□□ -0.23
SMG6-214ENST00000573827 ABRACLQ9P1F3 81 aa13.63□□□□□ -0.23
SMG6-214ENST00000573827 OR1A1Q9P1Q5 309 aa13.63□□□□□ -0.23
SMG6-214ENST00000573827 RAB26Q9ULW5 256 aa13.63□□□□□ -0.23
SMG6-214ENST00000573827 V9GY05 133 aa13.63□□□□□ -0.23
SMG6-214ENST00000573827 IGHV7-81A0A0B4J1V7 117 aa13.62□□□□□ -0.23
SMG6-214ENST00000573827 TRAV1-2A0A0B4J238 106 aa13.62□□□□□ -0.23
SMG6-214ENST00000573827 NDUFA3O95167 84 aa13.62□□□□□ -0.23
SMG6-214ENST00000573827 DUS4LO95620 317 aaKnown RBP13.62□□□□□ -0.23
SMG6-214ENST00000573827 ELANEP08246 267 aa13.62□□□□□ -0.23
SMG6-214ENST00000573827 SCTP09683 121 aa13.62□□□□□ -0.23
SMG6-214ENST00000573827 CDX1P47902 265 aaPredicted RBP13.62□□□□□ -0.23
SMG6-214ENST00000573827 VEGFCP49767 419 aa13.62□□□□□ -0.23
SMG6-214ENST00000573827 OR10A3P58181 314 aa13.62□□□□□ -0.23
SMG6-214ENST00000573827 HLA-DRB3P79483 266 aa13.62□□□□□ -0.23
SMG6-214ENST00000573827 NDPQ00604 133 aa13.62□□□□□ -0.23
SMG6-214ENST00000573827 MMDQ15546 238 aa13.62□□□□□ -0.23
SMG6-214ENST00000573827 C5orf64Q2M2E5 130 aa13.62□□□□□ -0.23
SMG6-214ENST00000573827 C19orf54Q5BKX5 351 aa13.62□□□□□ -0.23
SMG6-214ENST00000573827 PTX4Q96A99 478 aa13.62□□□□□ -0.23
SMG6-214ENST00000573827 KCTD7Q96MP8 289 aa13.62□□□□□ -0.23
SMG6-214ENST00000573827 DUX3Q96PT4 197 aa13.62□□□□□ -0.23
SMG6-214ENST00000573827 C11orf54Q9H0W9 315 aaPredicted RBP13.62□□□□□ -0.23
SMG6-214ENST00000573827 C12orf4Q9NQ89 552 aa13.62□□□□□ -0.23
SMG6-214ENST00000573827 HUWE1Q7Z6Z7 4374 aaKnown RBP13.62□□□□□ -0.23
SMG6-214ENST00000573827 SNRPBP14678 240 aaKnown RBP13.61□□□□□ -0.23
SMG6-214ENST00000573827 MOGAT2Q3SYC2 334 aa13.61□□□□□ -0.23
SMG6-214ENST00000573827 ABHD14BQ96IU4 210 aa13.61□□□□□ -0.23
SMG6-214ENST00000573827 TOLLIPQ9H0E2 274 aa13.61□□□□□ -0.23
SMG6-214ENST00000573827 CHMP1AQ9HD42 196 aaPredicted RBP13.61□□□□□ -0.23
SMG6-214ENST00000573827 PIPOXQ9P0Z9 390 aa13.61□□□□□ -0.23
SMG6-214ENST00000573827 STEAP1Q9UHE8 339 aa13.61□□□□□ -0.23
SMG6-214ENST00000573827 NBEAL2Q6ZNJ1 2754 aa13.61□□□□□ -0.23
SMG6-214ENST00000573827 TRDV1A0A1B0GX56 115 aa13.6□□□□□ -0.23
SMG6-214ENST00000573827 WI2-2373I1.2A0A1W2PRP0 233 aa13.6□□□□□ -0.23
SMG6-214ENST00000573827 H0YJW9 148 aa13.6□□□□□ -0.23
SMG6-214ENST00000573827 RAB29O14966 203 aa13.6□□□□□ -0.23
SMG6-214ENST00000573827 NBR2O15453 112 aa13.6□□□□□ -0.23
SMG6-214ENST00000573827 ATP6V1G2O95670 118 aa13.6□□□□□ -0.23
SMG6-214ENST00000573827 IGLV1-40P01703 118 aa13.6□□□□□ -0.23
SMG6-214ENST00000573827 HOXD3P31249 432 aaPredicted RBP13.6□□□□□ -0.23
SMG6-214ENST00000573827 GABARAPL2P60520 117 aa13.6□□□□□ -0.23
SMG6-214ENST00000573827 FHL3Q13643 280 aa13.6□□□□□ -0.23
SMG6-214ENST00000573827 KIR2DS1Q14954 304 aa13.6□□□□□ -0.23
SMG6-214ENST00000573827 DEFB136Q30KP8 78 aa13.6□□□□□ -0.23
SMG6-214ENST00000573827 HES5Q5TA89 166 aa13.6□□□□□ -0.23
SMG6-214ENST00000573827 FAM131AQ6UXB0 335 aa13.6□□□□□ -0.23
SMG6-214ENST00000573827 OR5AN1Q8NGI8 311 aa13.6□□□□□ -0.23
SMG6-214ENST00000573827 SETD6Q8TBK2 473 aa13.6□□□□□ -0.23
SMG6-214ENST00000573827 GON7Q9BXV9 100 aa13.6□□□□□ -0.23
SMG6-214ENST00000573827 KLK15Q9H2R5 256 aa13.6□□□□□ -0.23
SMG6-214ENST00000573827 OR51J1Q9H342 316 aa13.6□□□□□ -0.23
SMG6-214ENST00000573827 BLOC1S6Q9UL45 172 aa13.6□□□□□ -0.23
SMG6-214ENST00000573827 FBXO7Q9Y3I1 522 aa13.6□□□□□ -0.23
SMG6-214ENST00000573827 IFITM5A6NNB3 132 aa13.59□□□□□ -0.23
SMG6-214ENST00000573827 NUDT19A8MXV4 375 aa13.59□□□□□ -0.23
SMG6-214ENST00000573827 G3V318 75 aa13.59□□□□□ -0.23
SMG6-214ENST00000573827 CCL24O00175 119 aa13.59□□□□□ -0.23
SMG6-214ENST00000573827 RAB27BO00194 218 aa13.59□□□□□ -0.23
SMG6-214ENST00000573827 ATP6V0E1O15342 81 aa13.59□□□□□ -0.23
SMG6-214ENST00000573827 DENRO43583 198 aaKnown RBP13.59□□□□□ -0.23
SMG6-214ENST00000573827 RRP9O43818 475 aaKnown RBP13.59□□□□□ -0.23
SMG6-214ENST00000573827 PSMD7P51665 324 aa13.59□□□□□ -0.23
SMG6-214ENST00000573827 CXorf66Q5JRM2 361 aaPredicted RBP13.59□□□□□ -0.23
SMG6-214ENST00000573827 UBE2UQ5VVX9 321 aa13.59□□□□□ -0.23
SMG6-214ENST00000573827 GLDNQ6ZMI3 551 aaPredicted RBP13.59□□□□□ -0.23
SMG6-214ENST00000573827 MINDY2Q8NBR6 621 aa13.59□□□□□ -0.23
SMG6-214ENST00000573827 OR56B1Q8NGI3 324 aa13.59□□□□□ -0.23
SMG6-214ENST00000573827 CHCHD6Q9BRQ6 235 aa13.59□□□□□ -0.23
SMG6-214ENST00000573827 RAB22AQ9UL26 194 aa13.59□□□□□ -0.23
SMG6-214ENST00000573827 MGAT4AQ9UM21 535 aa13.59□□□□□ -0.23
SMG6-214ENST00000573827 A0A0B4J203 849 aa13.58□□□□□ -0.24
SMG6-214ENST00000573827 MFNGO00587 321 aa13.58□□□□□ -0.24
SMG6-214ENST00000573827 MRPS14O60783 128 aaKnown RBP13.58□□□□□ -0.24
SMG6-214ENST00000573827 EGR2P11161 476 aaPredicted RBP13.58□□□□□ -0.24
SMG6-214ENST00000573827 VDAC1P21796 283 aa13.58□□□□□ -0.24
SMG6-214ENST00000573827 GALP22466 123 aa13.58□□□□□ -0.24
SMG6-214ENST00000573827 ZBTB25P24278 435 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms