RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 IL34Q6ZMJ4 242 aa15.11■□□□□ 0.01
CCDC40-206ENST00000572083 OR52I1Q8NGK6 324 aa15.11■□□□□ 0.01
CCDC40-206ENST00000572083 YPEL2Q96QA6 119 aa15.11■□□□□ 0.01
CCDC40-206ENST00000572083 SELENOIQ9C0D9 397 aa15.11■□□□□ 0.01
CCDC40-206ENST00000572083 PLEKHA3Q9HB20 300 aa15.11■□□□□ 0.01
CCDC40-206ENST00000572083 ZNF355PQ9NSJ1 428 aa15.11■□□□□ 0.01
CCDC40-206ENST00000572083 HERC2O95714 4834 aa15.1■□□□□ 0.01
CCDC40-206ENST00000572083 C13orf42A0A1B0GVH6 325 aa15.1■□□□□ 0.01
CCDC40-206ENST00000572083 IZUMO1RA6ND01 250 aa15.1■□□□□ 0.01
CCDC40-206ENST00000572083 EI24O14681 340 aa15.1■□□□□ 0.01
CCDC40-206ENST00000572083 CT45A6P0DMU7 189 aa15.1■□□□□ 0.01
CCDC40-206ENST00000572083 CT45A5P0DMU8 189 aa15.1■□□□□ 0.01
CCDC40-206ENST00000572083 CT45A7P0DMV0 189 aa15.1■□□□□ 0.01
CCDC40-206ENST00000572083 IGFBP3P17936 291 aaPredicted RBP15.1■□□□□ 0.01
CCDC40-206ENST00000572083 KLF5Q13887 457 aaPredicted RBP15.1■□□□□ 0.01
CCDC40-206ENST00000572083 LCN12Q6JVE5 192 aa15.1■□□□□ 0.01
CCDC40-206ENST00000572083 METTL1Q9UBP6 276 aaKnown RBP15.1■□□□□ 0.01
CCDC40-206ENST00000572083 ADAM30Q9UKF2 790 aa15.1■□□□□ 0.01
CCDC40-206ENST00000572083 TRAV8-7A0A075B6U6 113 aa15.09■□□□□ 0.01
CCDC40-206ENST00000572083 OR5H14A6NHG9 310 aa15.09■□□□□ 0.01
CCDC40-206ENST00000572083 H7C2Y5 167 aa15.09■□□□□ 0.01
CCDC40-206ENST00000572083 GSTP1P09211 210 aaKnown RBP15.09■□□□□ 0.01
CCDC40-206ENST00000572083 LIMS3P0CW19 117 aa15.09■□□□□ 0.01
CCDC40-206ENST00000572083 LIMS4P0CW20 117 aa15.09■□□□□ 0.01
CCDC40-206ENST00000572083 DEFA5Q01523 94 aa15.09■□□□□ 0.01
CCDC40-206ENST00000572083 C1orf146Q5VVC0 180 aa15.09■□□□□ 0.01
CCDC40-206ENST00000572083 DMKNQ6E0U4 476 aaPredicted RBP15.09■□□□□ 0.01
CCDC40-206ENST00000572083 AWAT2Q6E213 333 aa15.09■□□□□ 0.01
CCDC40-206ENST00000572083 SIGIRRQ6IA17 410 aa15.09■□□□□ 0.01
CCDC40-206ENST00000572083 FAM71F2Q6NXP2 309 aa15.09■□□□□ 0.01
CCDC40-206ENST00000572083 RPL22L1Q6P5R6 122 aaKnown RBP15.09■□□□□ 0.01
CCDC40-206ENST00000572083 ZNF554Q86TJ5 538 aa15.09■□□□□ 0.01
CCDC40-206ENST00000572083 JAGN1Q8N5M9 183 aa15.09■□□□□ 0.01
CCDC40-206ENST00000572083 GRPEL2Q8TAA5 225 aa15.09■□□□□ 0.01
CCDC40-206ENST00000572083 LINC00476Q8WZB0 136 aa15.09■□□□□ 0.01
CCDC40-206ENST00000572083 GALMQ96C23 342 aa15.09■□□□□ 0.01
CCDC40-206ENST00000572083 GMPPBQ9Y5P6 360 aa15.09■□□□□ 0.01
CCDC40-206ENST00000572083 SHISA3A0PJX4 238 aa15.08■□□□□ 0
CCDC40-206ENST00000572083 H0YJW9 148 aa15.08■□□□□ 0
CCDC40-206ENST00000572083 CRTAPO75718 401 aaPredicted RBP15.08■□□□□ 0
CCDC40-206ENST00000572083 BAG2O95816 211 aa15.08■□□□□ 0
CCDC40-206ENST00000572083 MGMTP16455 207 aa15.08■□□□□ 0
CCDC40-206ENST00000572083 FUT3P21217 361 aa15.08■□□□□ 0
CCDC40-206ENST00000572083 ZNF562Q6V9R5 426 aa15.08■□□□□ 0
CCDC40-206ENST00000572083 Q8N402 240 aa15.08■□□□□ 0
CCDC40-206ENST00000572083 POC5Q8NA72 575 aa15.08■□□□□ 0
CCDC40-206ENST00000572083 IL1F10Q8WWZ1 152 aa15.08■□□□□ 0
CCDC40-206ENST00000572083 Q96M66 194 aa15.08■□□□□ 0
CCDC40-206ENST00000572083 WASHC3Q9Y3C0 194 aa15.08■□□□□ 0
CCDC40-206ENST00000572083 CSN3P07498 182 aa15.07■□□□□ 0
CCDC40-206ENST00000572083 CD81P60033 236 aa15.07■□□□□ 0
CCDC40-206ENST00000572083 PSG5Q15238 335 aa15.07■□□□□ 0
CCDC40-206ENST00000572083 CCDC58Q4VC31 144 aa15.07■□□□□ 0
CCDC40-206ENST00000572083 LY6G6FQ5SQ64 297 aa15.07■□□□□ 0
CCDC40-206ENST00000572083 RNLSQ5VYX0 342 aa15.07■□□□□ 0
CCDC40-206ENST00000572083 LINC00322Q6ZN03 302 aaPredicted RBP15.07■□□□□ 0
CCDC40-206ENST00000572083 PIPOXQ9P0Z9 390 aa15.07■□□□□ 0
CCDC40-206ENST00000572083 CKLFQ9UBR5 152 aa15.07■□□□□ 0
CCDC40-206ENST00000572083 RBMY1BA6NDE4 496 aaKnown RBP15.06■□□□□ 0
CCDC40-206ENST00000572083 RBMY1EA6NEQ0 496 aaKnown RBP15.06■□□□□ 0
CCDC40-206ENST00000572083 FAM90A7PA6NKC0 464 aa15.06■□□□□ 0
CCDC40-206ENST00000572083 FAM90A23PA8MXZ1 464 aa15.06■□□□□ 0
CCDC40-206ENST00000572083 RAB29O14966 203 aa15.06■□□□□ 0
CCDC40-206ENST00000572083 SLC25A17O43808 307 aa15.06■□□□□ 0
CCDC40-206ENST00000572083 PDCD6O75340 191 aa15.06■□□□□ 0
CCDC40-206ENST00000572083 BRI3O95415 125 aa15.06■□□□□ 0
CCDC40-206ENST00000572083 RBMY1DP0C7P1 496 aaKnown RBP15.06■□□□□ 0
CCDC40-206ENST00000572083 HMGN3Q15651 99 aa15.06■□□□□ 0
CCDC40-206ENST00000572083 C6orf141Q5SZD1 244 aa15.06■□□□□ 0
CCDC40-206ENST00000572083 OR2G6Q5TZ20 316 aa15.06■□□□□ 0
CCDC40-206ENST00000572083 OR5T1Q8NG75 326 aa15.06■□□□□ 0
CCDC40-206ENST00000572083 SMIM19Q96E16 107 aa15.06■□□□□ 0
CCDC40-206ENST00000572083 ABHD14BQ96IU4 210 aa15.06■□□□□ 0
CCDC40-206ENST00000572083 Q96MT0 163 aa15.06■□□□□ 0
CCDC40-206ENST00000572083 PARP12Q9H0J9 701 aaKnown RBP15.06■□□□□ 0
CCDC40-206ENST00000572083 STEAP1Q9UHE8 339 aa15.06■□□□□ 0
CCDC40-206ENST00000572083 SLC22A1O15245 554 aa15.05■□□□□ -0
CCDC40-206ENST00000572083 RBBP9O75884 186 aa15.05■□□□□ -0
CCDC40-206ENST00000572083 LY6G6CO95867 125 aa15.05■□□□□ -0
CCDC40-206ENST00000572083 TRBV12-3P01733 135 aa15.05■□□□□ -0
CCDC40-206ENST00000572083 GLAP06280 429 aa15.05■□□□□ -0
CCDC40-206ENST00000572083 MC5RP33032 325 aa15.05■□□□□ -0
CCDC40-206ENST00000572083 FAM46BQ96A09 425 aa15.05■□□□□ -0
CCDC40-206ENST00000572083 WFDC10AQ9H1F0 79 aa15.05■□□□□ -0
CCDC40-206ENST00000572083 SLC23A1Q9UHI7 598 aa15.05■□□□□ -0
CCDC40-206ENST00000572083 DNAH10Q8IVF4 4471 aa15.04■□□□□ -0
CCDC40-206ENST00000572083 A0A0G2JLM5 398 aa15.04■□□□□ -0
CCDC40-206ENST00000572083 TRBV5-5A0A0J9YX44 114 aa15.04■□□□□ -0
CCDC40-206ENST00000572083 A0A1W2PPK0 400 aa15.04■□□□□ -0
CCDC40-206ENST00000572083 H3BUA1 57 aa15.04■□□□□ -0
CCDC40-206ENST00000572083 FSTP19883 344 aa15.04■□□□□ -0
CCDC40-206ENST00000572083 ETV1P50549 477 aa15.04■□□□□ -0
CCDC40-206ENST00000572083 ALDH3A2P51648 485 aa15.04■□□□□ -0
CCDC40-206ENST00000572083 DYRK1AQ13627 763 aa15.04■□□□□ -0
CCDC40-206ENST00000572083 FXYD3Q14802 87 aa15.04■□□□□ -0
CCDC40-206ENST00000572083 MOGAT2Q3SYC2 334 aa15.04■□□□□ -0
CCDC40-206ENST00000572083 DEFB125Q8N687 156 aa15.04■□□□□ -0
CCDC40-206ENST00000572083 OR5AN1Q8NGI8 311 aa15.04■□□□□ -0
CCDC40-206ENST00000572083 RHOXF1Q8NHV9 184 aa15.04■□□□□ -0
CCDC40-206ENST00000572083 OR14A2Q96R54 314 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms