RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 YPEL2Q96QA6 119 aa14.63□□□□□ -0.07
NUP88-203ENST00000572019 FAM110AQ9BQ89 295 aa14.63□□□□□ -0.07
NUP88-203ENST00000572019 FGF20Q9NP95 211 aaPredicted RBP14.63□□□□□ -0.07
NUP88-203ENST00000572019 CLEC2DQ9UHP7 191 aa14.63□□□□□ -0.07
NUP88-203ENST00000572019 IZUMO1RA6ND01 250 aa14.62□□□□□ -0.07
NUP88-203ENST00000572019 WBP4O75554 376 aaKnown RBP14.62□□□□□ -0.07
NUP88-203ENST00000572019 GPX5O75715 221 aa14.62□□□□□ -0.07
NUP88-203ENST00000572019 LINC00205P59089 165 aa14.62□□□□□ -0.07
NUP88-203ENST00000572019 HTD2P86397 168 aa14.62□□□□□ -0.07
NUP88-203ENST00000572019 DMKNQ6E0U4 476 aaPredicted RBP14.62□□□□□ -0.07
NUP88-203ENST00000572019 AWAT2Q6E213 333 aa14.62□□□□□ -0.07
NUP88-203ENST00000572019 ANKRD13BQ86YJ7 626 aa14.62□□□□□ -0.07
NUP88-203ENST00000572019 GHSRQ92847 366 aa14.62□□□□□ -0.07
NUP88-203ENST00000572019 MYCBPQ99417 103 aaPredicted RBP14.62□□□□□ -0.07
NUP88-203ENST00000572019 SLC29A1Q99808 456 aa14.62□□□□□ -0.07
NUP88-203ENST00000572019 RAB9BQ9NP90 201 aa14.62□□□□□ -0.07
NUP88-203ENST00000572019 TRBV5-7A0A0A0MS05 114 aa14.61□□□□□ -0.07
NUP88-203ENST00000572019 H0YJW9 148 aa14.61□□□□□ -0.07
NUP88-203ENST00000572019 TRGV3P03979 118 aa14.61□□□□□ -0.07
NUP88-203ENST00000572019 FUT3P21217 361 aa14.61□□□□□ -0.07
NUP88-203ENST00000572019 SSBP2P81877 361 aaPredicted RBP14.61□□□□□ -0.07
NUP88-203ENST00000572019 GPR176Q14439 515 aa14.61□□□□□ -0.07
NUP88-203ENST00000572019 PLGLAQ15195 96 aa14.61□□□□□ -0.07
NUP88-203ENST00000572019 HMGN3Q15651 99 aa14.61□□□□□ -0.07
NUP88-203ENST00000572019 TCTEX1D1Q8N7M0 179 aa14.61□□□□□ -0.07
NUP88-203ENST00000572019 ABHD14BQ96IU4 210 aa14.61□□□□□ -0.07
NUP88-203ENST00000572019 PGLYRP3Q96LB9 341 aa14.61□□□□□ -0.07
NUP88-203ENST00000572019 OR14A2Q96R54 314 aa14.61□□□□□ -0.07
NUP88-203ENST00000572019 SULT4A1Q9BR01 284 aa14.61□□□□□ -0.07
NUP88-203ENST00000572019 CHCHD3Q9NX63 227 aaKnown RBP14.61□□□□□ -0.07
NUP88-203ENST00000572019 KCNIP1Q9NZI2 227 aa14.61□□□□□ -0.07
NUP88-203ENST00000572019 NKX1-2Q9UD57 310 aaPredicted RBP14.61□□□□□ -0.07
NUP88-203ENST00000572019 ERGIC3Q9Y282 383 aa14.61□□□□□ -0.07
NUP88-203ENST00000572019 RPL36Q9Y3U8 105 aaKnown RBP14.61□□□□□ -0.07
NUP88-203ENST00000572019 ANKRD34BA5PLL1 514 aa14.6□□□□□ -0.07
NUP88-203ENST00000572019 ARPC1BO15143 372 aaKnown RBP14.6□□□□□ -0.07
NUP88-203ENST00000572019 CRTAPO75718 401 aaPredicted RBP14.6□□□□□ -0.07
NUP88-203ENST00000572019 CA2P00918 260 aa14.6□□□□□ -0.07
NUP88-203ENST00000572019 FSTP19883 344 aa14.6□□□□□ -0.07
NUP88-203ENST00000572019 AKIRIN2Q53H80 203 aa14.6□□□□□ -0.07
NUP88-203ENST00000572019 OR2AK2Q8NG84 335 aa14.6□□□□□ -0.07
NUP88-203ENST00000572019 Q96MT0 163 aa14.6□□□□□ -0.07
NUP88-203ENST00000572019 ELOVL1Q9BW60 279 aa14.6□□□□□ -0.07
NUP88-203ENST00000572019 PDCD6O75340 191 aa14.59□□□□□ -0.07
NUP88-203ENST00000572019 PROP1O75360 226 aa14.59□□□□□ -0.07
NUP88-203ENST00000572019 CA11O75493 328 aa14.59□□□□□ -0.07
NUP88-203ENST00000572019 TRBV12-3P01733 135 aa14.59□□□□□ -0.07
NUP88-203ENST00000572019 PSG5Q15238 335 aa14.59□□□□□ -0.07
NUP88-203ENST00000572019 Q499Y3 187 aa14.59□□□□□ -0.07
NUP88-203ENST00000572019 LY6G6FQ5SQ64 297 aa14.59□□□□□ -0.07
NUP88-203ENST00000572019 DRAXINQ8NBI3 349 aaPredicted RBP14.59□□□□□ -0.07
NUP88-203ENST00000572019 IL1F10Q8WWZ1 152 aa14.59□□□□□ -0.07
NUP88-203ENST00000572019 TMED9Q9BVK6 235 aa14.59□□□□□ -0.07
NUP88-203ENST00000572019 BABAM2Q9NXR7 383 aa14.59□□□□□ -0.07
NUP88-203ENST00000572019 METTL1Q9UBP6 276 aaKnown RBP14.59□□□□□ -0.07
NUP88-203ENST00000572019 LOC100130705A0A1B0GUX0 176 aa14.58□□□□□ -0.08
NUP88-203ENST00000572019 FAM90A7PA6NKC0 464 aa14.58□□□□□ -0.08
NUP88-203ENST00000572019 FAM90A23PA8MXZ1 464 aa14.58□□□□□ -0.08
NUP88-203ENST00000572019 RGS11O94810 467 aa14.58□□□□□ -0.08
NUP88-203ENST00000572019 SYNJ2BPP57105 145 aa14.58□□□□□ -0.08
NUP88-203ENST00000572019 TMEM267Q0VDI3 215 aaPredicted RBP14.58□□□□□ -0.08
NUP88-203ENST00000572019 KLF5Q13887 457 aaPredicted RBP14.58□□□□□ -0.08
NUP88-203ENST00000572019 OR10K2Q6IF99 312 aa14.58□□□□□ -0.08
NUP88-203ENST00000572019 PYHIN1Q6K0P9 492 aa14.58□□□□□ -0.08
NUP88-203ENST00000572019 ZNF554Q86TJ5 538 aa14.58□□□□□ -0.08
NUP88-203ENST00000572019 ZNF485Q8NCK3 441 aa14.58□□□□□ -0.08
NUP88-203ENST00000572019 OR5T1Q8NG75 326 aa14.58□□□□□ -0.08
NUP88-203ENST00000572019 OR9G4Q8NGQ1 327 aa14.58□□□□□ -0.08
NUP88-203ENST00000572019 GRPEL2Q8TAA5 225 aa14.58□□□□□ -0.08
NUP88-203ENST00000572019 GALMQ96C23 342 aa14.58□□□□□ -0.08
NUP88-203ENST00000572019 FAAP24Q9BTP7 215 aa14.58□□□□□ -0.08
NUP88-203ENST00000572019 HIPK2Q9H2X6 1198 aa14.58□□□□□ -0.08
NUP88-203ENST00000572019 KCNK15Q9H427 330 aa14.58□□□□□ -0.08
NUP88-203ENST00000572019 FRAS1Q86XX4 4008 aa14.57□□□□□ -0.08
NUP88-203ENST00000572019 PNMA8CA0A1B0GUJ8 204 aa14.57□□□□□ -0.08
NUP88-203ENST00000572019 H7C2Y5 167 aa14.57□□□□□ -0.08
NUP88-203ENST00000572019 RBMXL2O75526 392 aaKnown RBP14.57□□□□□ -0.08
NUP88-203ENST00000572019 JTBO76095 146 aa14.57□□□□□ -0.08
NUP88-203ENST00000572019 IGKV1-16P04430 117 aa14.57□□□□□ -0.08
NUP88-203ENST00000572019 GLAP06280 429 aa14.57□□□□□ -0.08
NUP88-203ENST00000572019 GSTP1P09211 210 aaKnown RBP14.57□□□□□ -0.08
NUP88-203ENST00000572019 FAM71F2Q6NXP2 309 aa14.57□□□□□ -0.08
NUP88-203ENST00000572019 ZNF562Q6V9R5 426 aa14.57□□□□□ -0.08
NUP88-203ENST00000572019 C6orf201Q7Z4U5 140 aa14.57□□□□□ -0.08
NUP88-203ENST00000572019 OR5AN1Q8NGI8 311 aa14.57□□□□□ -0.08
NUP88-203ENST00000572019 AGMATQ9BSE5 352 aa14.57□□□□□ -0.08
NUP88-203ENST00000572019 SLC23A1Q9UHI7 598 aa14.57□□□□□ -0.08
NUP88-203ENST00000572019 WASHC3Q9Y3C0 194 aa14.57□□□□□ -0.08
NUP88-203ENST00000572019 OR5H14A6NHG9 310 aa14.56□□□□□ -0.08
NUP88-203ENST00000572019 TFAP2AP05549 437 aa14.56□□□□□ -0.08
NUP88-203ENST00000572019 CSN3P07498 182 aa14.56□□□□□ -0.08
NUP88-203ENST00000572019 TMPRSS11AQ6ZMR5 421 aa14.56□□□□□ -0.08
NUP88-203ENST00000572019 LINC00322Q6ZN03 302 aaPredicted RBP14.56□□□□□ -0.08
NUP88-203ENST00000572019 SVOPQ8N4V2 548 aa14.56□□□□□ -0.08
NUP88-203ENST00000572019 DERL3Q96Q80 235 aa14.56□□□□□ -0.08
NUP88-203ENST00000572019 SLA2Q9H6Q3 261 aa14.56□□□□□ -0.08
NUP88-203ENST00000572019 PLEKHA3Q9HB20 300 aa14.56□□□□□ -0.08
NUP88-203ENST00000572019 RANGRFQ9HD47 186 aaPredicted RBP14.56□□□□□ -0.08
NUP88-203ENST00000572019 ZNF355PQ9NSJ1 428 aa14.56□□□□□ -0.08
NUP88-203ENST00000572019 OR1A1Q9P1Q5 309 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms