RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 P2RY1P47900 373 aa13.73□□□□□ -0.21
RAB40B-206ENST00000571995 IL13RA2Q14627 380 aa13.73□□□□□ -0.21
RAB40B-206ENST00000571995 IL34Q6ZMJ4 242 aa13.73□□□□□ -0.21
RAB40B-206ENST00000571995 LIN7CQ9NUP9 197 aaKnown RBP13.73□□□□□ -0.21
RAB40B-206ENST00000571995 AUP1Q9Y679 476 aa13.73□□□□□ -0.21
RAB40B-206ENST00000571995 WSB1Q9Y6I7 421 aa13.73□□□□□ -0.21
RAB40B-206ENST00000571995 CYC1P08574 325 aa13.73□□□□□ -0.21
RAB40B-206ENST00000571995 KLF3P57682 345 aaPredicted RBP13.73□□□□□ -0.21
RAB40B-206ENST00000571995 CYB561D1Q8N8Q1 229 aa13.73□□□□□ -0.21
RAB40B-206ENST00000571995 MRPL30Q8TCC3 161 aaKnown RBP13.73□□□□□ -0.21
RAB40B-206ENST00000571995 SSMEM1Q8WWF3 244 aa13.73□□□□□ -0.21
RAB40B-206ENST00000571995 TECTBQ96PL2 329 aa13.73□□□□□ -0.21
RAB40B-206ENST00000571995 TIMM8BQ9Y5J9 83 aaPredicted RBP13.73□□□□□ -0.21
RAB40B-206ENST00000571995 KPTNQ9Y664 436 aa13.73□□□□□ -0.21
RAB40B-206ENST00000571995 RAMP3O60896 148 aa13.72□□□□□ -0.21
RAB40B-206ENST00000571995 FAM87AP0C7U9 286 aa13.72□□□□□ -0.21
RAB40B-206ENST00000571995 TLE4Q04727 773 aa13.72□□□□□ -0.21
RAB40B-206ENST00000571995 NCMAPQ5T1S8 102 aa13.72□□□□□ -0.21
RAB40B-206ENST00000571995 CRIP3Q6Q6R5 217 aa13.72□□□□□ -0.21
RAB40B-206ENST00000571995 RNF138Q8WVD3 245 aa13.72□□□□□ -0.21
RAB40B-206ENST00000571995 ZDHHC16Q969W1 377 aa13.72□□□□□ -0.21
RAB40B-206ENST00000571995 GYPAP02724 150 aa13.72□□□□□ -0.21
RAB40B-206ENST00000571995 S100A2P29034 98 aa13.72□□□□□ -0.21
RAB40B-206ENST00000571995 SNCAP37840 140 aa13.72□□□□□ -0.21
RAB40B-206ENST00000571995 TNFAIP6P98066 277 aaPredicted RBP13.72□□□□□ -0.21
RAB40B-206ENST00000571995 EGR1P18146 543 aa13.72□□□□□ -0.21
RAB40B-206ENST00000571995 FGF7P21781 194 aa13.72□□□□□ -0.21
RAB40B-206ENST00000571995 RHEBQ15382 184 aa13.72□□□□□ -0.21
RAB40B-206ENST00000571995 OR4F5Q8NH21 305 aa13.72□□□□□ -0.21
RAB40B-206ENST00000571995 OR4F4Q96R69 305 aa13.72□□□□□ -0.21
RAB40B-206ENST00000571995 C12orf57Q99622 126 aa13.72□□□□□ -0.21
RAB40B-206ENST00000571995 SLX1AQ9BQ83 275 aa13.72□□□□□ -0.21
RAB40B-206ENST00000571995 PATZ1Q9HBE1 687 aaKnown RBP13.72□□□□□ -0.21
RAB40B-206ENST00000571995 GLRX2Q9NS18 164 aa13.72□□□□□ -0.21
RAB40B-206ENST00000571995 IGHV3-72A0A0B4J1Y9 119 aa13.71□□□□□ -0.21
RAB40B-206ENST00000571995 H7C1Q1 480 aa13.71□□□□□ -0.21
RAB40B-206ENST00000571995 TDGF1P13385 188 aa13.71□□□□□ -0.21
RAB40B-206ENST00000571995 HLA-GP17693 338 aa13.71□□□□□ -0.21
RAB40B-206ENST00000571995 ZNF343Q6P1L6 599 aa13.71□□□□□ -0.21
RAB40B-206ENST00000571995 FGFRL1Q8N441 504 aa13.71□□□□□ -0.21
RAB40B-206ENST00000571995 OR10P1Q8NGE3 313 aa13.71□□□□□ -0.21
RAB40B-206ENST00000571995 RIMS4Q9H426 269 aaPredicted RBP13.71□□□□□ -0.21
RAB40B-206ENST00000571995 CLDN14O95500 239 aa13.71□□□□□ -0.21
RAB40B-206ENST00000571995 PRDX2P32119 198 aa13.71□□□□□ -0.21
RAB40B-206ENST00000571995 SLC38A11Q08AI6 406 aa13.71□□□□□ -0.21
RAB40B-206ENST00000571995 DRAM1Q8N682 238 aa13.71□□□□□ -0.21
RAB40B-206ENST00000571995 NUDT16L1Q9BRJ7 211 aaKnown RBP13.71□□□□□ -0.21
RAB40B-206ENST00000571995 CACFD1Q9UGQ2 172 aa13.71□□□□□ -0.21
RAB40B-206ENST00000571995 SONP18583 2426 aaKnown RBP13.71□□□□□ -0.21
RAB40B-206ENST00000571995 NANPQ8TBE9 248 aa13.71□□□□□ -0.22
RAB40B-206ENST00000571995 BOD1Q96IK1 185 aa13.71□□□□□ -0.22
RAB40B-206ENST00000571995 K7EM74 188 aa13.7□□□□□ -0.22
RAB40B-206ENST00000571995 S1PR2O95136 353 aa13.7□□□□□ -0.22
RAB40B-206ENST00000571995 CFPP27918 469 aa13.7□□□□□ -0.22
RAB40B-206ENST00000571995 NAAAQ02083 359 aa13.7□□□□□ -0.22
RAB40B-206ENST00000571995 PLGLAQ15195 96 aa13.7□□□□□ -0.22
RAB40B-206ENST00000571995 RPL39P5Q59GN2 51 aa13.7□□□□□ -0.22
RAB40B-206ENST00000571995 UQCC3Q6UW78 93 aa13.7□□□□□ -0.22
RAB40B-206ENST00000571995 ZNF429Q86V71 674 aa13.7□□□□□ -0.22
RAB40B-206ENST00000571995 COL12A1Q99715 3063 aa13.7□□□□□ -0.22
RAB40B-206ENST00000571995 IGHV3-21A0A0B4J1V1 117 aa13.7□□□□□ -0.22
RAB40B-206ENST00000571995 C12orf77C9JDV5 145 aa13.7□□□□□ -0.22
RAB40B-206ENST00000571995 PTBP3O95758 552 aaKnown RBP13.7□□□□□ -0.22
RAB40B-206ENST00000571995 SAT2Q96F10 170 aaPredicted RBP13.7□□□□□ -0.22
RAB40B-206ENST00000571995 SLC35B3Q9H1N7 401 aa13.7□□□□□ -0.22
RAB40B-206ENST00000571995 TMPRSS5Q9H3S3 457 aa13.7□□□□□ -0.22
RAB40B-206ENST00000571995 RBFOX3A6NFN3 312 aa13.7□□□□□ -0.22
RAB40B-206ENST00000571995 ZNF883P0CG24 379 aa13.7□□□□□ -0.22
RAB40B-206ENST00000571995 FAM157CP0CG43 387 aa13.7□□□□□ -0.22
RAB40B-206ENST00000571995 GNB1P62873 340 aa13.7□□□□□ -0.22
RAB40B-206ENST00000571995 Q6ZRM9 215 aa13.7□□□□□ -0.22
RAB40B-206ENST00000571995 OR13A1Q8NGR1 328 aa13.7□□□□□ -0.22
RAB40B-206ENST00000571995 TMEM171Q8WVE6 324 aa13.7□□□□□ -0.22
RAB40B-206ENST00000571995 S1PR3Q99500 378 aa13.7□□□□□ -0.22
RAB40B-206ENST00000571995 CXXC4Q9H2H0 198 aa13.7□□□□□ -0.22
RAB40B-206ENST00000571995 PRELID3BQ9Y3B1 194 aa13.7□□□□□ -0.22
RAB40B-206ENST00000571995 STRAPQ9Y3F4 350 aaKnown RBP13.7□□□□□ -0.22
RAB40B-206ENST00000571995 AKAP13Q12802 2813 aa13.69□□□□□ -0.22
RAB40B-206ENST00000571995 VSTM5A8MXK1 200 aa13.69□□□□□ -0.22
RAB40B-206ENST00000571995 Q6ZT83 130 aa13.69□□□□□ -0.22
RAB40B-206ENST00000571995 ABHD17AQ96GS6 310 aa13.69□□□□□ -0.22
RAB40B-206ENST00000571995 TAAR6Q96RI8 345 aa13.69□□□□□ -0.22
RAB40B-206ENST00000571995 GAB2Q9UQC2 676 aa13.69□□□□□ -0.22
RAB40B-206ENST00000571995 ZZEF1O43149 2961 aa13.69□□□□□ -0.22
RAB40B-206ENST00000571995 TOX4O94842 621 aa13.69□□□□□ -0.22
RAB40B-206ENST00000571995 CDS2O95674 445 aa13.69□□□□□ -0.22
RAB40B-206ENST00000571995 TMEM42Q69YG0 159 aa13.69□□□□□ -0.22
RAB40B-206ENST00000571995 TMEM45BQ96B21 275 aa13.69□□□□□ -0.22
RAB40B-206ENST00000571995 ZNF292O60281 2723 aa13.69□□□□□ -0.22
RAB40B-206ENST00000571995 RNF212BA8MTL3 300 aa13.69□□□□□ -0.22
RAB40B-206ENST00000571995 CYB5BO43169 146 aa13.69□□□□□ -0.22
RAB40B-206ENST00000571995 TMEM50AO95807 157 aa13.69□□□□□ -0.22
RAB40B-206ENST00000571995 LOXL4Q96JB6 756 aa13.69□□□□□ -0.22
RAB40B-206ENST00000571995 USB1Q9BQ65 265 aaKnown RBP13.69□□□□□ -0.22
RAB40B-206ENST00000571995 ABCA2Q9BZC7 2435 aa13.69□□□□□ -0.22
RAB40B-206ENST00000571995 RRP8O43159 456 aaKnown RBP13.68□□□□□ -0.22
RAB40B-206ENST00000571995 SPINK4O60575 86 aa13.68□□□□□ -0.22
RAB40B-206ENST00000571995 ZG16O60844 167 aa13.68□□□□□ -0.22
RAB40B-206ENST00000571995 DFFBO76075 338 aa13.68□□□□□ -0.22
RAB40B-206ENST00000571995 INO80CQ6PI98 192 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms