RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 C5orf64Q2M2E5 130 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 FAM27D1Q5T7N8 215 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 LIPKQ5VXJ0 399 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 PYHIN1Q6K0P9 492 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 ZNF880Q6PDB4 577 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 LCNL1Q6ZST4 164 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 NPBQ8NG41 125 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 OR56B1Q8NGI3 324 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 SETD6Q8TBK2 473 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 RAX2Q96IS3 184 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 RNF5Q99942 180 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 B9D2Q9BPU9 175 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 NABP2Q9BQ15 211 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 HSPB9Q9BQS6 159 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 FAAP24Q9BTP7 215 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 MRPL20Q9BYC9 149 aaKnown RBP7.64□□□□□ -1.19
CIITA-207ENST00000571545 OR51J1Q9H342 316 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 ACOT13Q9NPJ3 140 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 SLC23A1Q9UHI7 598 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 VSIG4Q9Y279 399 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 PRKDCP78527 4128 aaKnown RBP7.63□□□□□ -1.19
CIITA-207ENST00000571545 TRAV41A0A0B4J266 112 aa7.63□□□□□ -1.19
CIITA-207ENST00000571545 ZNF736B4DX44 427 aaPredicted RBP7.63□□□□□ -1.19
CIITA-207ENST00000571545 PDCD5O14737 125 aa7.63□□□□□ -1.19
CIITA-207ENST00000571545 DIRAS3O95661 229 aa7.63□□□□□ -1.19
CIITA-207ENST00000571545 CD37P11049 281 aa7.63□□□□□ -1.19
CIITA-207ENST00000571545 SNRPBP14678 240 aaKnown RBP7.63□□□□□ -1.19
CIITA-207ENST00000571545 CPEP16870 476 aa7.63□□□□□ -1.19
CIITA-207ENST00000571545 CD40LGP29965 261 aa7.63□□□□□ -1.19
CIITA-207ENST00000571545 HOXD3P31249 432 aaPredicted RBP7.63□□□□□ -1.19
CIITA-207ENST00000571545 AQP4P55087 323 aa7.63□□□□□ -1.19
CIITA-207ENST00000571545 KRTAP10-11P60412 298 aa7.63□□□□□ -1.19
CIITA-207ENST00000571545 QRFPP83859 136 aa7.63□□□□□ -1.19
CIITA-207ENST00000571545 RUNX1Q01196 453 aa7.63□□□□□ -1.19
CIITA-207ENST00000571545 TMEM267Q0VDI3 215 aaPredicted RBP7.63□□□□□ -1.19
CIITA-207ENST00000571545 UNC119Q13432 240 aa7.63□□□□□ -1.19
CIITA-207ENST00000571545 INSL4Q14641 139 aa7.63□□□□□ -1.19
CIITA-207ENST00000571545 IRF3Q14653 427 aa7.63□□□□□ -1.19
CIITA-207ENST00000571545 TBCEQ15813 527 aaPredicted RBP7.63□□□□□ -1.19
CIITA-207ENST00000571545 C4orf48Q5BLP8 95 aa7.63□□□□□ -1.19
CIITA-207ENST00000571545 VAX1Q5SQQ9 334 aa7.63□□□□□ -1.19
CIITA-207ENST00000571545 ZNF660Q6AZW8 331 aaPredicted RBP7.63□□□□□ -1.19
CIITA-207ENST00000571545 LIN54Q6MZP7 749 aa7.63□□□□□ -1.19
CIITA-207ENST00000571545 FAM53AQ6NSI3 398 aaPredicted RBP7.63□□□□□ -1.19
CIITA-207ENST00000571545 PRSS48Q7RTY5 328 aa7.63□□□□□ -1.19
CIITA-207ENST00000571545 ODF3L1Q8IXM7 274 aa7.63□□□□□ -1.19
CIITA-207ENST00000571545 MYOZ3Q8TDC0 251 aa7.63□□□□□ -1.19
CIITA-207ENST00000571545 NICN1Q9BSH3 213 aa7.63□□□□□ -1.19
CIITA-207ENST00000571545 CCDC90BQ9GZT6 254 aa7.63□□□□□ -1.19
CIITA-207ENST00000571545 IFI27L2Q9H2X8 130 aa7.63□□□□□ -1.19
CIITA-207ENST00000571545 DUSP21Q9H596 190 aa7.63□□□□□ -1.19
CIITA-207ENST00000571545 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.63□□□□□ -1.19
CIITA-207ENST00000571545 PARP11Q9NR21 331 aa7.63□□□□□ -1.19
CIITA-207ENST00000571545 ZNF221Q9UK13 617 aa7.63□□□□□ -1.19
CIITA-207ENST00000571545 WASHC3Q9Y3C0 194 aa7.63□□□□□ -1.19
CIITA-207ENST00000571545 IGHV7-81A0A0B4J1V7 117 aa7.62□□□□□ -1.19
CIITA-207ENST00000571545 WI2-2373I1.2A0A1W2PRP0 233 aa7.62□□□□□ -1.19
CIITA-207ENST00000571545 LINC01548A6NM66 108 aa7.62□□□□□ -1.19
CIITA-207ENST00000571545 H7C2Y5 167 aa7.62□□□□□ -1.19
CIITA-207ENST00000571545 RRHO14718 337 aa7.62□□□□□ -1.19
CIITA-207ENST00000571545 ATP6V0E1O15342 81 aa7.62□□□□□ -1.19
CIITA-207ENST00000571545 SPDEFO95238 335 aa7.62□□□□□ -1.19
CIITA-207ENST00000571545 APOA2P02652 100 aa7.62□□□□□ -1.19
CIITA-207ENST00000571545 GSTP1P09211 210 aaKnown RBP7.62□□□□□ -1.19
CIITA-207ENST00000571545 GADD45AP24522 165 aa7.62□□□□□ -1.19
CIITA-207ENST00000571545 CALRP27797 417 aaKnown RBP7.62□□□□□ -1.19
CIITA-207ENST00000571545 CRIP2P52943 208 aaPredicted RBP7.62□□□□□ -1.19
CIITA-207ENST00000571545 ZNF616Q08AN1 781 aa7.62□□□□□ -1.19
CIITA-207ENST00000571545 CBX3Q13185 183 aa7.62□□□□□ -1.19
CIITA-207ENST00000571545 FHL3Q13643 280 aa7.62□□□□□ -1.19
CIITA-207ENST00000571545 ARL6IP1Q15041 203 aa7.62□□□□□ -1.19
CIITA-207ENST00000571545 P2RY14Q15391 338 aa7.62□□□□□ -1.19
CIITA-207ENST00000571545 OR10K2Q6IF99 312 aa7.62□□□□□ -1.19
CIITA-207ENST00000571545 FAM131AQ6UXB0 335 aa7.62□□□□□ -1.19
CIITA-207ENST00000571545 ZNF367Q7RTV3 350 aa7.62□□□□□ -1.19
CIITA-207ENST00000571545 FAM89BQ8N5H3 189 aa7.62□□□□□ -1.19
CIITA-207ENST00000571545 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.62□□□□□ -1.19
CIITA-207ENST00000571545 TMEM203Q969S6 136 aa7.62□□□□□ -1.19
CIITA-207ENST00000571545 TSNAXQ99598 290 aaKnown RBP7.62□□□□□ -1.19
CIITA-207ENST00000571545 CMSS1Q9BQ75 279 aaKnown RBP7.62□□□□□ -1.19
CIITA-207ENST00000571545 LPAR5Q9H1C0 372 aa7.62□□□□□ -1.19
CIITA-207ENST00000571545 FOXA2Q9Y261 457 aaPredicted RBP7.62□□□□□ -1.19
CIITA-207ENST00000571545 V9GY05 133 aa7.62□□□□□ -1.19
CIITA-207ENST00000571545 SEC14L6B5MCN3 397 aa7.61□□□□□ -1.19
CIITA-207ENST00000571545 H0YJW9 148 aa7.61□□□□□ -1.19
CIITA-207ENST00000571545 ARPC1BO15143 372 aaKnown RBP7.61□□□□□ -1.19
CIITA-207ENST00000571545 IGLV1-40P01703 118 aa7.61□□□□□ -1.19
CIITA-207ENST00000571545 NHLRC4P0CG21 123 aaPredicted RBP7.61□□□□□ -1.19
CIITA-207ENST00000571545 GALP22466 123 aa7.61□□□□□ -1.19
CIITA-207ENST00000571545 CRHBPP24387 322 aa7.61□□□□□ -1.19
CIITA-207ENST00000571545 MYL9P24844 172 aa7.61□□□□□ -1.19
CIITA-207ENST00000571545 PPIFP30405 207 aaKnown RBP7.61□□□□□ -1.19
CIITA-207ENST00000571545 OR3A3P47888 321 aa7.61□□□□□ -1.19
CIITA-207ENST00000571545 RPS25P62851 125 aaKnown RBP7.61□□□□□ -1.19
CIITA-207ENST00000571545 TAGLNQ01995 201 aaKnown RBP7.61□□□□□ -1.19
CIITA-207ENST00000571545 C18orf65Q6ZTR6 163 aa7.61□□□□□ -1.19
CIITA-207ENST00000571545 PDPNQ86YL7 162 aa7.61□□□□□ -1.19
CIITA-207ENST00000571545 MINDY2Q8NBR6 621 aa7.61□□□□□ -1.19
CIITA-207ENST00000571545 OR11H1Q8NG94 326 aa7.61□□□□□ -1.19
CIITA-207ENST00000571545 OR5AN1Q8NGI8 311 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms