RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 LRRC42Q9Y546 428 aa8.57□□□□□ -1.04
CHMP6-202ENST00000571457 TCRBV3S1A0A5B6 114 aa8.56□□□□□ -1.04
CHMP6-202ENST00000571457 SNTNA6NMZ2 147 aa8.56□□□□□ -1.04
CHMP6-202ENST00000571457 H7C2Y5 167 aa8.56□□□□□ -1.04
CHMP6-202ENST00000571457 RAB29O14966 203 aa8.56□□□□□ -1.04
CHMP6-202ENST00000571457 NDUFB8O95169 186 aa8.56□□□□□ -1.04
CHMP6-202ENST00000571457 MAS1P04201 325 aa8.56□□□□□ -1.04
CHMP6-202ENST00000571457 SLC22A6Q4U2R8 563 aa8.56□□□□□ -1.04
CHMP6-202ENST00000571457 C6orf141Q5SZD1 244 aa8.56□□□□□ -1.04
CHMP6-202ENST00000571457 DDI2Q5TDH0 399 aa8.56□□□□□ -1.04
CHMP6-202ENST00000571457 SYS1Q8N2H4 156 aa8.56□□□□□ -1.04
CHMP6-202ENST00000571457 GRPEL2Q8TAA5 225 aa8.56□□□□□ -1.04
CHMP6-202ENST00000571457 GHSRQ92847 366 aa8.56□□□□□ -1.04
CHMP6-202ENST00000571457 SNAPC3Q92966 411 aa8.56□□□□□ -1.04
CHMP6-202ENST00000571457 CLCC1Q96S66 551 aa8.56□□□□□ -1.04
CHMP6-202ENST00000571457 PDCD1LG2Q9BQ51 273 aa8.56□□□□□ -1.04
CHMP6-202ENST00000571457 ALG8Q9BVK2 526 aa8.56□□□□□ -1.04
CHMP6-202ENST00000571457 GABARAPL1Q9H0R8 117 aa8.56□□□□□ -1.04
CHMP6-202ENST00000571457 MBNL3Q9NUK0 354 aaKnown RBP8.56□□□□□ -1.04
CHMP6-202ENST00000571457 IMPAD1Q9NX62 359 aa8.56□□□□□ -1.04
CHMP6-202ENST00000571457 METTL1Q9UBP6 276 aaKnown RBP8.56□□□□□ -1.04
CHMP6-202ENST00000571457 WASHC3Q9Y3C0 194 aa8.56□□□□□ -1.04
CHMP6-202ENST00000571457 PEX16Q9Y5Y5 336 aa8.56□□□□□ -1.04
CHMP6-202ENST00000571457 A0A0B4J203 849 aa8.55□□□□□ -1.04
CHMP6-202ENST00000571457 SC5DO75845 299 aa8.55□□□□□ -1.04
CHMP6-202ENST00000571457 SPDEFO95238 335 aa8.55□□□□□ -1.04
CHMP6-202ENST00000571457 CA2P00918 260 aa8.55□□□□□ -1.04
CHMP6-202ENST00000571457 GLAP06280 429 aa8.55□□□□□ -1.04
CHMP6-202ENST00000571457 CD7P09564 240 aa8.55□□□□□ -1.04
CHMP6-202ENST00000571457 BDKRB2P30411 391 aa8.55□□□□□ -1.04
CHMP6-202ENST00000571457 SOX2P48431 317 aa8.55□□□□□ -1.04
CHMP6-202ENST00000571457 ALDH3A2P51648 485 aa8.55□□□□□ -1.04
CHMP6-202ENST00000571457 FXYD3Q14802 87 aa8.55□□□□□ -1.04
CHMP6-202ENST00000571457 PSG5Q15238 335 aa8.55□□□□□ -1.04
CHMP6-202ENST00000571457 CD300EQ496F6 205 aaPredicted RBP8.55□□□□□ -1.04
CHMP6-202ENST00000571457 MEDAGQ5VYS4 303 aa8.55□□□□□ -1.04
CHMP6-202ENST00000571457 LGALS9CQ6DKI2 356 aa8.55□□□□□ -1.04
CHMP6-202ENST00000571457 ZNF343Q6P1L6 599 aa8.55□□□□□ -1.04
CHMP6-202ENST00000571457 SLC16A13Q7RTY0 426 aa8.55□□□□□ -1.04
CHMP6-202ENST00000571457 OR5T1Q8NG75 326 aa8.55□□□□□ -1.04
CHMP6-202ENST00000571457 GPR148Q8TDV2 347 aa8.55□□□□□ -1.04
CHMP6-202ENST00000571457 DYNLRB2Q8TF09 96 aa8.55□□□□□ -1.04
CHMP6-202ENST00000571457 GALMQ96C23 342 aa8.55□□□□□ -1.04
CHMP6-202ENST00000571457 USMG5Q96IX5 58 aa8.55□□□□□ -1.04
CHMP6-202ENST00000571457 TMEM68Q96MH6 324 aa8.55□□□□□ -1.04
CHMP6-202ENST00000571457 TSNAXQ99598 290 aaKnown RBP8.55□□□□□ -1.04
CHMP6-202ENST00000571457 CIB1Q99828 191 aa8.55□□□□□ -1.04
CHMP6-202ENST00000571457 OVOL2Q9BRP0 275 aa8.55□□□□□ -1.04
CHMP6-202ENST00000571457 GABARAPL3Q9BY60 117 aa8.55□□□□□ -1.04
CHMP6-202ENST00000571457 ZNF446Q9NWS9 450 aa8.55□□□□□ -1.04
CHMP6-202ENST00000571457 STEAP1Q9UHE8 339 aa8.55□□□□□ -1.04
CHMP6-202ENST00000571457 A0A1W2PP11 408 aa8.54□□□□□ -1.04
CHMP6-202ENST00000571457 ZNF785A8K8V0 405 aa8.54□□□□□ -1.04
CHMP6-202ENST00000571457 H0YJW9 148 aa8.54□□□□□ -1.04
CHMP6-202ENST00000571457 DEDDO75618 318 aa8.54□□□□□ -1.04
CHMP6-202ENST00000571457 CT45A6P0DMU7 189 aa8.54□□□□□ -1.04
CHMP6-202ENST00000571457 CT45A5P0DMU8 189 aa8.54□□□□□ -1.04
CHMP6-202ENST00000571457 CT45A7P0DMV0 189 aa8.54□□□□□ -1.04
CHMP6-202ENST00000571457 FUT3P21217 361 aa8.54□□□□□ -1.04
CHMP6-202ENST00000571457 POLR2IP36954 125 aaKnown RBP8.54□□□□□ -1.04
CHMP6-202ENST00000571457 LGALS7P47929 136 aa8.54□□□□□ -1.04
CHMP6-202ENST00000571457 GBX2P52951 348 aaPredicted RBP8.54□□□□□ -1.04
CHMP6-202ENST00000571457 ATP6AP1Q15904 470 aa8.54□□□□□ -1.04
CHMP6-202ENST00000571457 GUCA2BQ16661 112 aa8.54□□□□□ -1.04
CHMP6-202ENST00000571457 SLC25A30Q5SVS4 291 aa8.54□□□□□ -1.04
CHMP6-202ENST00000571457 LHFPL3Q86UP9 236 aa8.54□□□□□ -1.04
CHMP6-202ENST00000571457 BVESQ8NE79 360 aa8.54□□□□□ -1.04
CHMP6-202ENST00000571457 OR5AN1Q8NGI8 311 aa8.54□□□□□ -1.04
CHMP6-202ENST00000571457 GGTLC1Q9BX51 225 aa8.54□□□□□ -1.04
CHMP6-202ENST00000571457 TINAGL1Q9GZM7 467 aaPredicted RBP8.54□□□□□ -1.04
CHMP6-202ENST00000571457 IFI27L2Q9H2X8 130 aa8.54□□□□□ -1.04
CHMP6-202ENST00000571457 ABRACLQ9P1F3 81 aa8.54□□□□□ -1.04
CHMP6-202ENST00000571457 EXOGQ9Y2C4 368 aaKnown RBP8.54□□□□□ -1.04
CHMP6-202ENST00000571457 FAM90A7PA6NKC0 464 aa8.53□□□□□ -1.04
CHMP6-202ENST00000571457 FAM90A23PA8MXZ1 464 aa8.53□□□□□ -1.04
CHMP6-202ENST00000571457 GPX5O75715 221 aa8.53□□□□□ -1.04
CHMP6-202ENST00000571457 CPEP16870 476 aa8.53□□□□□ -1.04
CHMP6-202ENST00000571457 ATF4P18848 351 aaPredicted RBP8.53□□□□□ -1.04
CHMP6-202ENST00000571457 TNFRSF9Q07011 255 aa8.53□□□□□ -1.04
CHMP6-202ENST00000571457 DYRK1AQ13627 763 aa8.53□□□□□ -1.04
CHMP6-202ENST00000571457 DMKNQ6E0U4 476 aaPredicted RBP8.53□□□□□ -1.04
CHMP6-202ENST00000571457 ZNF184Q99676 751 aaPredicted RBP8.53□□□□□ -1.04
CHMP6-202ENST00000571457 WFDC10AQ9H1F0 79 aa8.53□□□□□ -1.04
CHMP6-202ENST00000571457 ISG20L2Q9H9L3 353 aaKnown RBP8.53□□□□□ -1.04
CHMP6-202ENST00000571457 TECRQ9NZ01 308 aaKnown RBP8.53□□□□□ -1.04
CHMP6-202ENST00000571457 ADAM30Q9UKF2 790 aa8.53□□□□□ -1.04
CHMP6-202ENST00000571457 LOC102724200A0A096LPH7 203 aaPredicted RBP8.52□□□□□ -1.05
CHMP6-202ENST00000571457 A0A0J9YWU9 116 aa8.52□□□□□ -1.05
CHMP6-202ENST00000571457 UBE2QL1A1L167 161 aa8.52□□□□□ -1.05
CHMP6-202ENST00000571457 E9PI62 339 aa8.52□□□□□ -1.05
CHMP6-202ENST00000571457 ST8SIA5O15466 376 aa8.52□□□□□ -1.05
CHMP6-202ENST00000571457 TRBV12-3P01733 135 aa8.52□□□□□ -1.05
CHMP6-202ENST00000571457 T-ENOLP0DO92 83 aa8.52□□□□□ -1.05
CHMP6-202ENST00000571457 BMI1P35226 326 aa8.52□□□□□ -1.05
CHMP6-202ENST00000571457 RPS16P62249 146 aaKnown RBP8.52□□□□□ -1.05
CHMP6-202ENST00000571457 SNRPGP62308 76 aaKnown RBP8.52□□□□□ -1.05
CHMP6-202ENST00000571457 RIPK1Q13546 671 aa8.52□□□□□ -1.05
CHMP6-202ENST00000571457 DEFB114Q30KQ6 69 aa8.52□□□□□ -1.05
CHMP6-202ENST00000571457 RPL39P5Q59GN2 51 aa8.52□□□□□ -1.05
CHMP6-202ENST00000571457 GLDNQ6ZMI3 551 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms