RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 CASC10Q5T4H9 136 aa6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 AHSA2Q719I0 299 aa6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 ZNF429Q86V71 674 aa6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 DRAXINQ8NBI3 349 aaPredicted RBP6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 NPBQ8NG41 125 aa6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 NEDD4LQ96PU5 975 aa6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 CHCHD6Q9BRQ6 235 aa6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 NICN1Q9BSH3 213 aa6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 TOLLIPQ9H0E2 274 aa6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 IFI27L2Q9H2X8 130 aa6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 CHMP1AQ9HD42 196 aaPredicted RBP6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 ABRACLQ9P1F3 81 aa6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 FOXA2Q9Y261 457 aaPredicted RBP6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 DYNC2H1Q8NCM8 4307 aaKnown RBP6.65□□□□□ -1.35
CTDNEP1-203ENST00000570385 EFCAB10A6NFE3 127 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 RRHO14718 337 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 MYL12BO14950 172 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 NDUFA3O95167 84 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 GLAP06280 429 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 GSTP1P09211 210 aaKnown RBP6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 GNAO1P09471 354 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 EGR2P11161 476 aaPredicted RBP6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 TAS2R43P59537 309 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 HMGN3Q15651 99 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 ACSM3Q53FZ2 586 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 C19orf54Q5BKX5 351 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 ZFAND6Q6FIF0 208 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 LAIR2Q6ISS4 152 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 UNQ5815/PRO19632Q6UWF5 114 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 PPP1R27Q86WC6 154 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 CDH26Q8IXH8 852 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 SVOPQ8N4V2 548 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 DHRSXQ8N5I4 330 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 NKAIN3Q8N8D7 197 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 SETD9Q8NE22 299 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 LFNGQ8NES3 379 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 BPIFB6Q8NFQ5 453 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 UQCC2Q9BRT2 126 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 HDHD3Q9BSH5 251 aaPredicted RBP6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 RSRP1Q9BUV0 290 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 TMED9Q9BVK6 235 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 CST11Q9H112 138 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 TPSG1Q9NRR2 321 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 OR1A1Q9P1Q5 309 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 STEAP1Q9UHE8 339 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 RNF150Q9ULK6 438 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 ERGIC3Q9Y282 383 aa6.64□□□□□ -1.35
CTDNEP1-203ENST00000570385 H0YJW9 148 aa6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 RAB29O14966 203 aa6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 LGALS1P09382 135 aaKnown RBP6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 CEACAM6P40199 344 aa6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 WNT4P56705 351 aa6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 TPPP2P59282 170 aa6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 RPS27AP62979 156 aaKnown RBP6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 PITPNAQ00169 270 aa6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 UNC119Q13432 240 aa6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 ACTBL2Q562R1 376 aa6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 RBM48Q5RL73 367 aaKnown RBP6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 TTC23Q5W5X9 447 aa6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 ZNF660Q6AZW8 331 aaPredicted RBP6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 ACSM6Q6P461 480 aa6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 ZNF554Q86TJ5 538 aa6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 LRRTM1Q86UE6 522 aa6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 OR4C12Q96R67 309 aa6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 TMEM59Q9BXS4 323 aa6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 C11orf54Q9H0W9 315 aaPredicted RBP6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 GHITMQ9H3K2 345 aa6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 PALMDQ9NP74 551 aa6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 ZNF355PQ9NSJ1 428 aa6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 CNOT2Q9NZN8 540 aaKnown RBP6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 PIPOXQ9P0Z9 390 aa6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 METTL1Q9UBP6 276 aaKnown RBP6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 SLC23A1Q9UHI7 598 aa6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 PSORS1C1Q9UIG5 152 aa6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 WASHC3Q9Y3C0 194 aa6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 NUBP2Q9Y5Y2 271 aa6.63□□□□□ -1.35
CTDNEP1-203ENST00000570385 A0A0A6YYD4 124 aa6.62□□□□□ -1.35
CTDNEP1-203ENST00000570385 ANKRD34BA5PLL1 514 aa6.62□□□□□ -1.35
CTDNEP1-203ENST00000570385 OR5H14A6NHG9 310 aa6.62□□□□□ -1.35
CTDNEP1-203ENST00000570385 SOCS1O15524 211 aa6.62□□□□□ -1.35
CTDNEP1-203ENST00000570385 NAPSAO96009 420 aa6.62□□□□□ -1.35
CTDNEP1-203ENST00000570385 CA2P00918 260 aa6.62□□□□□ -1.35
CTDNEP1-203ENST00000570385 TRGV3P03979 118 aa6.62□□□□□ -1.35
CTDNEP1-203ENST00000570385 HSPB1P04792 205 aaKnown RBP6.62□□□□□ -1.35
CTDNEP1-203ENST00000570385 SCTP09683 121 aa6.62□□□□□ -1.35
CTDNEP1-203ENST00000570385 LYL1P12980 280 aa6.62□□□□□ -1.35
CTDNEP1-203ENST00000570385 MAPK3P27361 379 aaPredicted RBP6.62□□□□□ -1.35
CTDNEP1-203ENST00000570385 RPS16P62249 146 aaKnown RBP6.62□□□□□ -1.35
CTDNEP1-203ENST00000570385 DEFA5Q01523 94 aa6.62□□□□□ -1.35
CTDNEP1-203ENST00000570385 TMEM267Q0VDI3 215 aaPredicted RBP6.62□□□□□ -1.35
CTDNEP1-203ENST00000570385 PSG5Q15238 335 aa6.62□□□□□ -1.35
CTDNEP1-203ENST00000570385 P2RY14Q15391 338 aa6.62□□□□□ -1.35
CTDNEP1-203ENST00000570385 LY6G6FQ5SQ64 297 aa6.62□□□□□ -1.35
CTDNEP1-203ENST00000570385 GLT8D1Q68CQ7 371 aa6.62□□□□□ -1.35
CTDNEP1-203ENST00000570385 CEACAM19Q7Z692 300 aa6.62□□□□□ -1.35
CTDNEP1-203ENST00000570385 C8orf59Q8N0T1 100 aaPredicted RBP6.62□□□□□ -1.35
CTDNEP1-203ENST00000570385 NANOGP1Q8N7R0 232 aa6.62□□□□□ -1.35
CTDNEP1-203ENST00000570385 OR5T1Q8NG75 326 aa6.62□□□□□ -1.35
CTDNEP1-203ENST00000570385 OR6Q1Q8NGQ2 317 aa6.62□□□□□ -1.35
CTDNEP1-203ENST00000570385 GRPEL2Q8TAA5 225 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms