RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 KCNIP1Q9NZI2 227 aa9.24□□□□□ -0.93
CAPN3-220ENST00000569827 RPL36Q9Y3U8 105 aaKnown RBP9.24□□□□□ -0.93
CAPN3-220ENST00000569827 NUBP2Q9Y5Y2 271 aa9.24□□□□□ -0.93
CAPN3-220ENST00000569827 H7C2Y5 167 aa9.23□□□□□ -0.93
CAPN3-220ENST00000569827 HSPA12AO43301 675 aa9.23□□□□□ -0.93
CAPN3-220ENST00000569827 CA2P00918 260 aa9.23□□□□□ -0.93
CAPN3-220ENST00000569827 IGLV1-51P01701 117 aa9.23□□□□□ -0.93
CAPN3-220ENST00000569827 TRGV3P03979 118 aa9.23□□□□□ -0.93
CAPN3-220ENST00000569827 CT45A6P0DMU7 189 aa9.23□□□□□ -0.93
CAPN3-220ENST00000569827 CT45A5P0DMU8 189 aa9.23□□□□□ -0.93
CAPN3-220ENST00000569827 CT45A7P0DMV0 189 aa9.23□□□□□ -0.93
CAPN3-220ENST00000569827 FUT3P21217 361 aa9.23□□□□□ -0.93
CAPN3-220ENST00000569827 CRIP2P52943 208 aaPredicted RBP9.23□□□□□ -0.93
CAPN3-220ENST00000569827 HAGHQ16775 308 aa9.23□□□□□ -0.93
CAPN3-220ENST00000569827 Q499Y3 187 aa9.23□□□□□ -0.93
CAPN3-220ENST00000569827 CCDC58Q4VC31 144 aa9.23□□□□□ -0.93
CAPN3-220ENST00000569827 STEAP3Q658P3 488 aa9.23□□□□□ -0.93
CAPN3-220ENST00000569827 DMKNQ6E0U4 476 aaPredicted RBP9.23□□□□□ -0.93
CAPN3-220ENST00000569827 SGPP2Q8IWX5 399 aa9.23□□□□□ -0.93
CAPN3-220ENST00000569827 DRAXINQ8NBI3 349 aaPredicted RBP9.23□□□□□ -0.93
CAPN3-220ENST00000569827 GRPEL2Q8TAA5 225 aa9.23□□□□□ -0.93
CAPN3-220ENST00000569827 SETD6Q8TBK2 473 aa9.23□□□□□ -0.93
CAPN3-220ENST00000569827 PGLYRP3Q96LB9 341 aa9.23□□□□□ -0.93
CAPN3-220ENST00000569827 ZNF355PQ9NSJ1 428 aa9.23□□□□□ -0.93
CAPN3-220ENST00000569827 CNOT2Q9NZN8 540 aaKnown RBP9.23□□□□□ -0.93
CAPN3-220ENST00000569827 METTL1Q9UBP6 276 aaKnown RBP9.23□□□□□ -0.93
CAPN3-220ENST00000569827 TRBV5-7A0A0A0MS05 114 aa9.22□□□□□ -0.93
CAPN3-220ENST00000569827 IZUMO1RA6ND01 250 aa9.22□□□□□ -0.93
CAPN3-220ENST00000569827 H0YJW9 148 aa9.22□□□□□ -0.93
CAPN3-220ENST00000569827 YPEL1O60688 119 aa9.22□□□□□ -0.93
CAPN3-220ENST00000569827 PDCD6O75340 191 aa9.22□□□□□ -0.93
CAPN3-220ENST00000569827 TRBV12-3P01733 135 aa9.22□□□□□ -0.93
CAPN3-220ENST00000569827 GSTP1P09211 210 aaKnown RBP9.22□□□□□ -0.93
CAPN3-220ENST00000569827 FSTP19883 344 aa9.22□□□□□ -0.93
CAPN3-220ENST00000569827 GPR176Q14439 515 aa9.22□□□□□ -0.93
CAPN3-220ENST00000569827 INSL4Q14641 139 aa9.22□□□□□ -0.93
CAPN3-220ENST00000569827 HMGN3Q15651 99 aa9.22□□□□□ -0.93
CAPN3-220ENST00000569827 C6orf141Q5SZD1 244 aa9.22□□□□□ -0.93
CAPN3-220ENST00000569827 ZNF660Q6AZW8 331 aaPredicted RBP9.22□□□□□ -0.93
CAPN3-220ENST00000569827 TMPRSS11AQ6ZMR5 421 aa9.22□□□□□ -0.93
CAPN3-220ENST00000569827 C6orf201Q7Z4U5 140 aa9.22□□□□□ -0.93
CAPN3-220ENST00000569827 OR5T1Q8NG75 326 aa9.22□□□□□ -0.93
CAPN3-220ENST00000569827 GALMQ96C23 342 aa9.22□□□□□ -0.93
CAPN3-220ENST00000569827 FLYWCH2Q96CP2 140 aaKnown RBP9.22□□□□□ -0.93
CAPN3-220ENST00000569827 RHOVQ96L33 236 aa9.22□□□□□ -0.93
CAPN3-220ENST00000569827 YPEL2Q96QA6 119 aa9.22□□□□□ -0.93
CAPN3-220ENST00000569827 SPATA25Q9BR10 227 aa9.22□□□□□ -0.93
CAPN3-220ENST00000569827 FAAP24Q9BTP7 215 aa9.22□□□□□ -0.93
CAPN3-220ENST00000569827 TMED9Q9BVK6 235 aa9.22□□□□□ -0.93
CAPN3-220ENST00000569827 CKLFQ9UBR5 152 aa9.22□□□□□ -0.93
CAPN3-220ENST00000569827 STUB1Q9UNE7 303 aa9.22□□□□□ -0.93
CAPN3-220ENST00000569827 ERGIC3Q9Y282 383 aa9.22□□□□□ -0.93
CAPN3-220ENST00000569827 ARPC1BO15143 372 aaKnown RBP9.21□□□□□ -0.94
CAPN3-220ENST00000569827 GPX5O75715 221 aa9.21□□□□□ -0.94
CAPN3-220ENST00000569827 APELAP0DMC3 54 aa9.21□□□□□ -0.94
CAPN3-220ENST00000569827 RASSF2P50749 326 aa9.21□□□□□ -0.94
CAPN3-220ENST00000569827 HTD2P86397 168 aa9.21□□□□□ -0.94
CAPN3-220ENST00000569827 LYPD6Q86Y78 171 aa9.21□□□□□ -0.94
CAPN3-220ENST00000569827 NICN1Q9BSH3 213 aa9.21□□□□□ -0.94
CAPN3-220ENST00000569827 HDHD3Q9BSH5 251 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-220ENST00000569827 ELOVL1Q9BW60 279 aa9.21□□□□□ -0.94
CAPN3-220ENST00000569827 BABAM2Q9NXR7 383 aa9.21□□□□□ -0.94
CAPN3-220ENST00000569827 OR1A1Q9P1Q5 309 aa9.21□□□□□ -0.94
CAPN3-220ENST00000569827 RNF150Q9ULK6 438 aa9.21□□□□□ -0.94
CAPN3-220ENST00000569827 WASHC3Q9Y3C0 194 aa9.21□□□□□ -0.94
CAPN3-220ENST00000569827 DNAH10Q8IVF4 4471 aa9.21□□□□□ -0.94
CAPN3-220ENST00000569827 DYNC1I1O14576 645 aa9.2□□□□□ -0.94
CAPN3-220ENST00000569827 CA11O75493 328 aa9.2□□□□□ -0.94
CAPN3-220ENST00000569827 RGS11O94810 467 aa9.2□□□□□ -0.94
CAPN3-220ENST00000569827 IGKV1-16P04430 117 aa9.2□□□□□ -0.94
CAPN3-220ENST00000569827 MYL12AP19105 171 aa9.2□□□□□ -0.94
CAPN3-220ENST00000569827 DCKP27707 260 aa9.2□□□□□ -0.94
CAPN3-220ENST00000569827 CAPGP40121 348 aa9.2□□□□□ -0.94
CAPN3-220ENST00000569827 VEGFCP49767 419 aa9.2□□□□□ -0.94
CAPN3-220ENST00000569827 SYNJ2BPP57105 145 aa9.2□□□□□ -0.94
CAPN3-220ENST00000569827 SSBP2P81877 361 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-220ENST00000569827 TMEM267Q0VDI3 215 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-220ENST00000569827 PSG5Q15238 335 aa9.2□□□□□ -0.94
CAPN3-220ENST00000569827 YIF1BQ5BJH7 314 aa9.2□□□□□ -0.94
CAPN3-220ENST00000569827 CD200R1LQ6Q8B3 271 aa9.2□□□□□ -0.94
CAPN3-220ENST00000569827 SVOPQ8N4V2 548 aa9.2□□□□□ -0.94
CAPN3-220ENST00000569827 TCTEX1D1Q8N7M0 179 aa9.2□□□□□ -0.94
CAPN3-220ENST00000569827 DERL3Q96Q80 235 aa9.2□□□□□ -0.94
CAPN3-220ENST00000569827 WFDC10AQ9H1F0 79 aa9.2□□□□□ -0.94
CAPN3-220ENST00000569827 PLEKHA3Q9HB20 300 aa9.2□□□□□ -0.94
CAPN3-220ENST00000569827 CHMP1AQ9HD42 196 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-220ENST00000569827 STEAP1Q9UHE8 339 aa9.2□□□□□ -0.94
CAPN3-220ENST00000569827 SLC23A1Q9UHI7 598 aa9.2□□□□□ -0.94
CAPN3-220ENST00000569827 SELENOKQ9Y6D0 94 aa9.2□□□□□ -0.94
CAPN3-220ENST00000569827 A0A0A6YYD4 124 aa9.19□□□□□ -0.94
CAPN3-220ENST00000569827 C13orf42A0A1B0GVH6 325 aa9.19□□□□□ -0.94
CAPN3-220ENST00000569827 OR5H14A6NHG9 310 aa9.19□□□□□ -0.94
CAPN3-220ENST00000569827 FAM90A7PA6NKC0 464 aa9.19□□□□□ -0.94
CAPN3-220ENST00000569827 FAM90A23PA8MXZ1 464 aa9.19□□□□□ -0.94
CAPN3-220ENST00000569827 SLC25A17O43808 307 aa9.19□□□□□ -0.94
CAPN3-220ENST00000569827 RBMXL2O75526 392 aaKnown RBP9.19□□□□□ -0.94
CAPN3-220ENST00000569827 PJVKQ0ZLH3 352 aa9.19□□□□□ -0.94
CAPN3-220ENST00000569827 DYRK1AQ13627 763 aa9.19□□□□□ -0.94
CAPN3-220ENST00000569827 PYHIN1Q6K0P9 492 aa9.19□□□□□ -0.94
CAPN3-220ENST00000569827 IL34Q6ZMJ4 242 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms