RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 TMEM50AO95807 157 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 IGKV1-5P01602 117 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 CD5P06127 495 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 CD55P08174 381 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 OR8U9P0C7N5 309 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 IL2RGP31785 369 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 GLIPR1P48060 266 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 ARHGDIBP52566 201 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 POLR2GP62487 172 aaKnown RBP eCLIP4.49□□□□□ -1.69
SF3B3-213ENST00000569687 RPL11P62913 178 aaKnown RBP4.49□□□□□ -1.69
SF3B3-213ENST00000569687 VAMP2P63027 116 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 NHLH2Q02577 135 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 AESQ08117 197 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 ZNF266Q14584 549 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 KRBOX4Q5JUW0 171 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 SP5Q6BEB4 398 aaPredicted RBP4.49□□□□□ -1.69
SF3B3-213ENST00000569687 SHISA2Q6UWI4 295 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 Q6ZRM9 215 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 C22orf34Q6ZV56 151 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 FAM219AQ8IW50 185 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 ODF3L1Q8IXM7 274 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 FGFRL1Q8N441 504 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 GCSAMQ8N6F7 178 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 ZNF645Q8N7E2 425 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 OR2Z1Q8NG97 314 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 OR8U1Q8NH10 309 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 ZCCHC14Q8WYQ9 949 aaKnown RBP4.49□□□□□ -1.69
SF3B3-213ENST00000569687 CORO2AQ92828 525 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 SDSLQ96GA7 329 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 YPEL2Q96QA6 119 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 DIRC2Q96SL1 478 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 AGMATQ9BSE5 352 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 SCRT1Q9BWW7 348 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 SMDT1Q9H4I9 107 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 LIN7CQ9NUP9 197 aaKnown RBP4.49□□□□□ -1.69
SF3B3-213ENST00000569687 UFSP2Q9NUQ7 469 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 AP5S1Q9NUS5 200 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 ASF1BQ9NVP2 202 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 RNF7Q9UBF6 113 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 OR14J1Q9UGF5 321 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 CACFD1Q9UGQ2 172 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 IL19Q9UHD0 177 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 FZR1Q9UM11 496 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 PPP1R3CQ9UQK1 317 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 STRAPQ9Y3F4 350 aaKnown RBP4.49□□□□□ -1.69
SF3B3-213ENST00000569687 MMP24Q9Y5R2 645 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 WSB1Q9Y6I7 421 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 ATMQ13315 3056 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 BOD1L1Q8NFC6 3051 aa4.49□□□□□ -1.69
SF3B3-213ENST00000569687 MGAQ8IWI9 3026 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 GTF3C1Q12789 2109 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 A0A0G2JRQ6 117 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 MED19A0JLT2 244 aaPredicted RBP4.48□□□□□ -1.69
SF3B3-213ENST00000569687 ODAMA1E959 279 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 IGSF23A1L1A6 192 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 TMEM8BA6NDV4 472 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 DPRXA6NFQ7 191 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 FAM90A9PA6NNJ1 464 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 RNASEK-C17orf49H0YIS7 233 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 TOR1AO14656 332 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 ABCD4O14678 606 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 RBFOX2O43251 390 aaKnown RBP eCLIP4.48□□□□□ -1.69
SF3B3-213ENST00000569687 TXNL1O43396 289 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 TNFSF12O43508 249 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 SYNGR2O43760 224 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 DFFBO76075 338 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 LY86O95711 162 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 IGHV1-46P01743 117 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 OR8U8P0C7N1 319 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 FAM87AP0C7U9 286 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 EGR1P18146 543 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 TNFSF4P23510 183 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 LPAR6P43657 344 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 CEBPDP49716 269 aaPredicted RBP4.48□□□□□ -1.69
SF3B3-213ENST00000569687 SULT1A1P50225 295 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 F2RL1P55085 397 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 LOXL3P58215 753 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 BRWD1-AS2P59051 145 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 RPL23AP62750 156 aaKnown RBP4.48□□□□□ -1.69
SF3B3-213ENST00000569687 RBPJQ06330 500 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 AARDQ4LEZ3 155 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 PXDC1Q5TGL8 231 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 TEX36Q5VZQ5 186 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 TMEM108Q6UXF1 575 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 GFRALQ6UXV0 394 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 DPPA3Q6W0C5 159 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 MOGAT3Q86VF5 341 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 ZNF561Q8N587 486 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 OR52L2PQ8NGH6 319 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 OR13A1Q8NGR1 328 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 OR51H1Q8NH63 302 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 SUN5Q8TC36 379 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 CD300LFQ8TDQ1 290 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 MRGPRDQ8TDS7 321 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 SNRNP40Q96DI7 357 aaKnown RBP4.48□□□□□ -1.69
SF3B3-213ENST00000569687 GNPNAT1Q96EK6 184 aaPredicted RBP4.48□□□□□ -1.69
SF3B3-213ENST00000569687 OR2V2Q96R30 315 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 GPHA2Q96T91 129 aa4.48□□□□□ -1.69
SF3B3-213ENST00000569687 HSD17B10Q99714 261 aaKnown RBP4.48□□□□□ -1.69
SF3B3-213ENST00000569687 SEC11CQ9BY50 192 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms