RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 SIRPB1O00241 398 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 FCN3O75636 299 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 PPIAL4FP0DN26 164 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 MYOD1P15172 320 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 PRDX2P32119 198 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 GABRA2P47869 451 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 RFX2P48378 723 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 HERV-K104P63124 156 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 DYNC1I2Q13409 638 aaKnown RBP6.5□□□□□ -1.37
CDH11-216ENST00000569128 GPR176Q14439 515 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 ZMYND11Q15326 602 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 TWIST1Q15672 202 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 ZNF181Q2M3W8 571 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 NCR3LG1Q68D85 454 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 LYPD2Q6UXB3 125 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 FGFRL1Q8N441 504 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 FAM89BQ8N5H3 189 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 ZNF525Q8N782 197 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 CHST4Q8NCG5 386 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 DYRK2Q92630 601 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 DIRAS2Q96HU8 199 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 ARHGAP5-AS1Q96IT6 56 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 CCL13Q99616 98 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 NEURL2Q9BR09 285 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 TM2D1Q9BX74 207 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 CST11Q9H112 138 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 C5orf66Q9H5L9 145 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 TMEM165Q9HC07 324 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 WIPI2Q9Y4P8 454 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 PPIAL4AQ9Y536 164 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 PEX16Q9Y5Y5 336 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 CRYBG3Q68DQ2 2970 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 A0A0G2JMP0 313 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 A0A0X1KG70 313 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 LRRC30A6NM36 301 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 OR2AT4A6NND4 320 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 E5RGE8 158 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 LGALS8O00214 317 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 CHEK1O14757 476 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 DEGS1O15121 323 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 PPIHO43447 177 aaKnown RBP6.49□□□□□ -1.37
CDH11-216ENST00000569128 ZNF780AO75290 641 aaPredicted RBP6.49□□□□□ -1.37
CDH11-216ENST00000569128 OR7C1O76099 320 aaPredicted RBP6.49□□□□□ -1.37
CDH11-216ENST00000569128 OR2H2O95918 312 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 HAND1O96004 215 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 HLA-DQB1P01920 261 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 APOA1P02647 267 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 RPA2P15927 270 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 GNB3P16520 340 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 BLVRBP30043 206 aaPredicted RBP6.49□□□□□ -1.37
CDH11-216ENST00000569128 FCGR2BP31994 310 aaPredicted RBP6.49□□□□□ -1.37
CDH11-216ENST00000569128 DUTP33316 252 aaKnown RBP6.49□□□□□ -1.37
CDH11-216ENST00000569128 TAGLN2P37802 199 aaKnown RBP6.49□□□□□ -1.37
CDH11-216ENST00000569128 ATP5J2P56134 94 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 SEC61A1P61619 476 aaKnown RBP6.49□□□□□ -1.37
CDH11-216ENST00000569128 ANKRD55Q3KP44 614 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 CDNFQ49AH0 187 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 ATAD3CQ5T2N8 411 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 TEX36Q5VZQ5 186 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 STUMQ69YW2 141 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 C6orf201Q7Z4U5 140 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 C5orf24Q7Z6I8 188 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 LRRC28Q86X40 367 aaPredicted RBP6.49□□□□□ -1.37
CDH11-216ENST00000569128 BPIFB2Q8N4F0 458 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 OR4M2Q8NGB6 313 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 OR10R2Q8NGX6 335 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 ANGPTL6Q8NI99 470 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 PTX4Q96A99 478 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 S100A16Q96FQ6 103 aaKnown RBP6.49□□□□□ -1.37
CDH11-216ENST00000569128 SOSTQ9BQB4 213 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 SULT4A1Q9BR01 284 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 TMEM246Q9BRR3 403 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 SLC25A33Q9BSK2 321 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 URM1Q9BTM9 101 aaKnown RBP6.49□□□□□ -1.37
CDH11-216ENST00000569128 FAAP24Q9BTP7 215 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 PECRQ9BY49 303 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 NARFLQ9H6Q4 476 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 RASL12Q9NYN1 266 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 ZNF222Q9UK12 451 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 NSG2Q9Y328 171 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 NPTNQ9Y639 398 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 CELSR2Q9HCU4 2923 aa6.49□□□□□ -1.37
CDH11-216ENST00000569128 MEIOCA2RUB1 952 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 METTL21EPA6NDL7 271 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 MEIS3P1A6NDR6 274 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 TMEM235A6NFC5 223 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 FABP12A6NFH5 140 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 CLDN25C9JDP6 229 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 SH2D1BO14796 132 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 PDCD6O75340 191 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 TOMM40O96008 361 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 APOHP02749 345 aaPredicted RBP6.48□□□□□ -1.37
CDH11-216ENST00000569128 FCER2P06734 321 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 ZNF44P15621 663 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 S100A5P33763 92 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 TAS2R20P59543 309 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 BTG1P62324 171 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 MRPS11P82912 194 aaKnown RBP6.48□□□□□ -1.37
CDH11-216ENST00000569128 ZNF146Q15072 292 aa6.48□□□□□ -1.37
CDH11-216ENST00000569128 SMIM21Q3B7S5 101 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms