RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 SCTP09683 121 aa15.98■□□□□ 0.15
CLK3-225ENST00000569063 SOX6P35712 828 aa15.98■□□□□ 0.15
CLK3-225ENST00000569063 CEACAM6P40199 344 aa15.98■□□□□ 0.15
CLK3-225ENST00000569063 RPL23AP62750 156 aaKnown RBP15.98■□□□□ 0.15
CLK3-225ENST00000569063 MOGAT2Q3SYC2 334 aa15.98■□□□□ 0.15
CLK3-225ENST00000569063 OXLD1Q5BKU9 147 aa15.98■□□□□ 0.15
CLK3-225ENST00000569063 ZNF773Q6PK81 442 aa15.98■□□□□ 0.15
CLK3-225ENST00000569063 OR10R2Q8NGX6 335 aa15.98■□□□□ 0.15
CLK3-225ENST00000569063 PTX4Q96A99 478 aa15.98■□□□□ 0.15
CLK3-225ENST00000569063 PARP12Q9H0J9 701 aaKnown RBP15.98■□□□□ 0.15
CLK3-225ENST00000569063 TXNL4BQ9NX01 149 aaKnown RBP15.98■□□□□ 0.15
CLK3-225ENST00000569063 STUB1Q9UNE7 303 aa15.98■□□□□ 0.15
CLK3-225ENST00000569063 TRDCB7Z8K6 153 aa15.97■□□□□ 0.15
CLK3-225ENST00000569063 PF4P02776 101 aa15.97■□□□□ 0.15
CLK3-225ENST00000569063 CD33P20138 364 aa15.97■□□□□ 0.15
CLK3-225ENST00000569063 ACTBP60709 375 aa15.97■□□□□ 0.15
CLK3-225ENST00000569063 MMDQ15546 238 aa15.97■□□□□ 0.15
CLK3-225ENST00000569063 TEX38Q6PEX7 206 aa15.97■□□□□ 0.15
CLK3-225ENST00000569063 EDARADDQ8WWZ3 215 aa15.97■□□□□ 0.15
CLK3-225ENST00000569063 RITA1Q96K30 269 aa15.97■□□□□ 0.15
CLK3-225ENST00000569063 HSPB9Q9BQS6 159 aa15.97■□□□□ 0.15
CLK3-225ENST00000569063 C11orf54Q9H0W9 315 aaPredicted RBP15.97■□□□□ 0.15
CLK3-225ENST00000569063 OR1A1Q9P1Q5 309 aa15.97■□□□□ 0.15
CLK3-225ENST00000569063 ZNF580Q9UK33 172 aa15.97■□□□□ 0.15
CLK3-225ENST00000569063 RAB27BO00194 218 aa15.96■□□□□ 0.15
CLK3-225ENST00000569063 HSPA12AO43301 675 aa15.96■□□□□ 0.15
CLK3-225ENST00000569063 IGF1P05019 195 aa15.96■□□□□ 0.15
CLK3-225ENST00000569063 GADD45AP24522 165 aa15.96■□□□□ 0.15
CLK3-225ENST00000569063 SLC6A1P30531 599 aa15.96■□□□□ 0.15
CLK3-225ENST00000569063 MRPS15P82914 257 aaKnown RBP15.96■□□□□ 0.15
CLK3-225ENST00000569063 PNLIPRP3Q17RR3 467 aa15.96■□□□□ 0.15
CLK3-225ENST00000569063 TPRA1Q86W33 373 aa15.96■□□□□ 0.15
CLK3-225ENST00000569063 PHF21AQ96BD5 680 aa15.96■□□□□ 0.15
CLK3-225ENST00000569063 A0A0B4J203 849 aa15.95■□□□□ 0.14
CLK3-225ENST00000569063 IGKV1-6A0A0C4DH72 117 aa15.95■□□□□ 0.14
CLK3-225ENST00000569063 METTL21EPA6NDL7 271 aa15.95■□□□□ 0.14
CLK3-225ENST00000569063 NOTOA8MTQ0 251 aa15.95■□□□□ 0.14
CLK3-225ENST00000569063 MFNGO00587 321 aa15.95■□□□□ 0.14
CLK3-225ENST00000569063 RRP9O43818 475 aaKnown RBP15.95■□□□□ 0.14
CLK3-225ENST00000569063 CD3GP09693 182 aa15.95■□□□□ 0.14
CLK3-225ENST00000569063 CT45A6P0DMU7 189 aa15.95■□□□□ 0.14
CLK3-225ENST00000569063 CT45A5P0DMU8 189 aa15.95■□□□□ 0.14
CLK3-225ENST00000569063 CT45A7P0DMV0 189 aa15.95■□□□□ 0.14
CLK3-225ENST00000569063 RPL39P5Q59GN2 51 aa15.95■□□□□ 0.14
CLK3-225ENST00000569063 NPBQ8NG41 125 aa15.95■□□□□ 0.14
CLK3-225ENST00000569063 OR4A4PQ8NGN8 299 aa15.95■□□□□ 0.14
CLK3-225ENST00000569063 ABHD14BQ96IU4 210 aa15.95■□□□□ 0.14
CLK3-225ENST00000569063 TOLLIPQ9H0E2 274 aa15.95■□□□□ 0.14
CLK3-225ENST00000569063 ZNF107Q9UII5 783 aaPredicted RBP15.95■□□□□ 0.14
CLK3-225ENST00000569063 SSR3Q9UNL2 185 aa15.95■□□□□ 0.14
CLK3-225ENST00000569063 OR5H14A6NHG9 310 aa15.94■□□□□ 0.14
CLK3-225ENST00000569063 NBR2O15453 112 aa15.94■□□□□ 0.14
CLK3-225ENST00000569063 FCGR3AP08637 254 aa15.94■□□□□ 0.14
CLK3-225ENST00000569063 SLC2A2P11168 524 aaPredicted RBP15.94■□□□□ 0.14
CLK3-225ENST00000569063 HIST1H1DP16402 221 aaKnown RBP15.94■□□□□ 0.14
CLK3-225ENST00000569063 GNB3P16520 340 aa15.94■□□□□ 0.14
CLK3-225ENST00000569063 CNTFRP26992 372 aa15.94■□□□□ 0.14
CLK3-225ENST00000569063 MC5RP33032 325 aa15.94■□□□□ 0.14
CLK3-225ENST00000569063 SERPINB10P48595 397 aa15.94■□□□□ 0.14
CLK3-225ENST00000569063 CFHR3Q02985 330 aa15.94■□□□□ 0.14
CLK3-225ENST00000569063 RNF152Q8N8N0 203 aa15.94■□□□□ 0.14
CLK3-225ENST00000569063 NDUFA3O95167 84 aa15.93■□□□□ 0.14
CLK3-225ENST00000569063 HLA-DRB1P01911 266 aa15.93■□□□□ 0.14
CLK3-225ENST00000569063 IGLL1P15814 213 aa15.93■□□□□ 0.14
CLK3-225ENST00000569063 FOXE3Q13461 319 aa15.93■□□□□ 0.14
CLK3-225ENST00000569063 KIR2DS1Q14954 304 aa15.93■□□□□ 0.14
CLK3-225ENST00000569063 KCTD21Q4G0X4 260 aa15.93■□□□□ 0.14
CLK3-225ENST00000569063 FAM131AQ6UXB0 335 aa15.93■□□□□ 0.14
CLK3-225ENST00000569063 ETV3LQ6ZN32 361 aa15.93■□□□□ 0.14
CLK3-225ENST00000569063 REC114Q7Z4M0 266 aa15.93■□□□□ 0.14
CLK3-225ENST00000569063 OR5AN1Q8NGI8 311 aa15.93■□□□□ 0.14
CLK3-225ENST00000569063 CHCHD6Q9BRQ6 235 aa15.93■□□□□ 0.14
CLK3-225ENST00000569063 RDH8Q9NYR8 311 aa15.93■□□□□ 0.14
CLK3-225ENST00000569063 RRP15Q9Y3B9 282 aaKnown RBP15.93■□□□□ 0.14
CLK3-225ENST00000569063 SMIM30A4D0T7 59 aa15.92■□□□□ 0.14
CLK3-225ENST00000569063 H0YJW9 148 aa15.92■□□□□ 0.14
CLK3-225ENST00000569063 FABP7O15540 132 aa15.92■□□□□ 0.14
CLK3-225ENST00000569063 PROP1O75360 226 aa15.92■□□□□ 0.14
CLK3-225ENST00000569063 DIRAS3O95661 229 aa15.92■□□□□ 0.14
CLK3-225ENST00000569063 IGHG4P01861 327 aa15.92■□□□□ 0.14
CLK3-225ENST00000569063 ELANEP08246 267 aa15.92■□□□□ 0.14
CLK3-225ENST00000569063 VDAC1P21796 283 aa15.92■□□□□ 0.14
CLK3-225ENST00000569063 THBS3P49746 956 aa15.92■□□□□ 0.14
CLK3-225ENST00000569063 SRSF7Q16629 238 aaKnown RBP eCLIP15.92■□□□□ 0.14
CLK3-225ENST00000569063 C5orf64Q2M2E5 130 aa15.92■□□□□ 0.14
CLK3-225ENST00000569063 LIN54Q6MZP7 749 aa15.92■□□□□ 0.14
CLK3-225ENST00000569063 C18orf65Q6ZTR6 163 aa15.92■□□□□ 0.14
CLK3-225ENST00000569063 LINC00482Q8N8I6 264 aa15.92■□□□□ 0.14
CLK3-225ENST00000569063 RCC1LQ96I51 464 aaKnown RBP15.92■□□□□ 0.14
CLK3-225ENST00000569063 ATG5Q9H1Y0 275 aa15.92■□□□□ 0.14
CLK3-225ENST00000569063 OR51E2Q9H255 320 aa15.92■□□□□ 0.14
CLK3-225ENST00000569063 NECAP2Q9NVZ3 263 aa15.92■□□□□ 0.14
CLK3-225ENST00000569063 RNF150Q9ULK6 438 aa15.92■□□□□ 0.14
CLK3-225ENST00000569063 A0A075B6Q4 140 aa15.91■□□□□ 0.14
CLK3-225ENST00000569063 DUS4LO95620 317 aaKnown RBP15.91■□□□□ 0.14
CLK3-225ENST00000569063 RPLP1P05386 114 aaKnown RBP15.91■□□□□ 0.14
CLK3-225ENST00000569063 GSTT2P0CG29 244 aa15.91■□□□□ 0.14
CLK3-225ENST00000569063 GSTT2BP0CG30 244 aa15.91■□□□□ 0.14
CLK3-225ENST00000569063 OR5H8P0DN80 308 aa15.91■□□□□ 0.14
CLK3-225ENST00000569063 ARL6IP1Q15041 203 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms