RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 C22orf42Q6IC83 251 aa23.13■■□□□ 1.29
RAB40C-211ENST00000568586 NR2C2APQ86WQ0 139 aa23.13■■□□□ 1.29
RAB40C-211ENST00000568586 CMSS1Q9BQ75 279 aaKnown RBP23.13■■□□□ 1.29
RAB40C-211ENST00000568586 GON7Q9BXV9 100 aa23.13■■□□□ 1.29
RAB40C-211ENST00000568586 PARP12Q9H0J9 701 aaKnown RBP23.13■■□□□ 1.29
RAB40C-211ENST00000568586 ZBTB25P24278 435 aa23.12■■□□□ 1.29
RAB40C-211ENST00000568586 SOX6P35712 828 aa23.12■■□□□ 1.29
RAB40C-211ENST00000568586 RNF152Q8N8N0 203 aa23.12■■□□□ 1.29
RAB40C-211ENST00000568586 RAB27BO00194 218 aa23.11■■□□□ 1.29
RAB40C-211ENST00000568586 ST8SIA5O15466 376 aa23.11■■□□□ 1.29
RAB40C-211ENST00000568586 IGF1P05019 195 aa23.11■■□□□ 1.29
RAB40C-211ENST00000568586 SCTP09683 121 aa23.11■■□□□ 1.29
RAB40C-211ENST00000568586 ACTBP60709 375 aa23.11■■□□□ 1.29
RAB40C-211ENST00000568586 CFHR3Q02985 330 aa23.11■■□□□ 1.29
RAB40C-211ENST00000568586 EDARADDQ8WWZ3 215 aa23.11■■□□□ 1.29
RAB40C-211ENST00000568586 RAB3CQ96E17 227 aa23.11■■□□□ 1.29
RAB40C-211ENST00000568586 RITA1Q96K30 269 aa23.11■■□□□ 1.29
RAB40C-211ENST00000568586 HSPB9Q9BQS6 159 aa23.11■■□□□ 1.29
RAB40C-211ENST00000568586 TOLLIPQ9H0E2 274 aa23.11■■□□□ 1.29
RAB40C-211ENST00000568586 C11orf54Q9H0W9 315 aaPredicted RBP23.11■■□□□ 1.29
RAB40C-211ENST00000568586 IGKV1-6A0A0C4DH72 117 aa23.1■■□□□ 1.29
RAB40C-211ENST00000568586 CEACAM6P40199 344 aa23.1■■□□□ 1.29
RAB40C-211ENST00000568586 PNLIPRP3Q17RR3 467 aa23.1■■□□□ 1.29
RAB40C-211ENST00000568586 MOGAT2Q3SYC2 334 aa23.1■■□□□ 1.29
RAB40C-211ENST00000568586 KHDC1LQ5JSQ8 128 aa23.1■■□□□ 1.29
RAB40C-211ENST00000568586 TEX38Q6PEX7 206 aa23.1■■□□□ 1.29
RAB40C-211ENST00000568586 ZNF773Q6PK81 442 aa23.1■■□□□ 1.29
RAB40C-211ENST00000568586 NPBQ8NG41 125 aa23.1■■□□□ 1.29
RAB40C-211ENST00000568586 OR10R2Q8NGX6 335 aa23.1■■□□□ 1.29
RAB40C-211ENST00000568586 TXNL4BQ9NX01 149 aaKnown RBP23.1■■□□□ 1.29
RAB40C-211ENST00000568586 OR1A1Q9P1Q5 309 aa23.1■■□□□ 1.29
RAB40C-211ENST00000568586 TRDCB7Z8K6 153 aa23.09■■□□□ 1.29
RAB40C-211ENST00000568586 CT45A6P0DMU7 189 aa23.09■■□□□ 1.29
RAB40C-211ENST00000568586 CT45A5P0DMU8 189 aa23.09■■□□□ 1.29
RAB40C-211ENST00000568586 CT45A7P0DMV0 189 aa23.09■■□□□ 1.29
RAB40C-211ENST00000568586 CD33P20138 364 aa23.09■■□□□ 1.29
RAB40C-211ENST00000568586 PSMB9P28065 219 aa23.09■■□□□ 1.29
RAB40C-211ENST00000568586 MMDQ15546 238 aa23.09■■□□□ 1.29
RAB40C-211ENST00000568586 PHF21AQ96BD5 680 aa23.09■■□□□ 1.29
RAB40C-211ENST00000568586 STUB1Q9UNE7 303 aa23.09■■□□□ 1.29
RAB40C-211ENST00000568586 MFNGO00587 321 aa23.08■■□□□ 1.29
RAB40C-211ENST00000568586 RRP9O43818 475 aaKnown RBP23.08■■□□□ 1.29
RAB40C-211ENST00000568586 PF4P02776 101 aa23.08■■□□□ 1.29
RAB40C-211ENST00000568586 ETV3LQ6ZN32 361 aa23.08■■□□□ 1.29
RAB40C-211ENST00000568586 REC114Q7Z4M0 266 aa23.08■■□□□ 1.29
RAB40C-211ENST00000568586 CHCHD6Q9BRQ6 235 aa23.08■■□□□ 1.29
RAB40C-211ENST00000568586 PROP1O75360 226 aa23.07■■□□□ 1.28
RAB40C-211ENST00000568586 NDUFA3O95167 84 aa23.07■■□□□ 1.28
RAB40C-211ENST00000568586 DIRAS3O95661 229 aa23.07■■□□□ 1.28
RAB40C-211ENST00000568586 HLA-DRB1P01911 266 aa23.07■■□□□ 1.28
RAB40C-211ENST00000568586 FOXE3Q13461 319 aa23.07■■□□□ 1.28
RAB40C-211ENST00000568586 RPL39P5Q59GN2 51 aa23.07■■□□□ 1.28
RAB40C-211ENST00000568586 TPRA1Q86W33 373 aa23.07■■□□□ 1.28
RAB40C-211ENST00000568586 LINC00482Q8N8I6 264 aa23.07■■□□□ 1.28
RAB40C-211ENST00000568586 OR5AN1Q8NGI8 311 aa23.07■■□□□ 1.28
RAB40C-211ENST00000568586 OR4A4PQ8NGN8 299 aa23.07■■□□□ 1.28
RAB40C-211ENST00000568586 ABHD14BQ96IU4 210 aa23.07■■□□□ 1.28
RAB40C-211ENST00000568586 ZNF107Q9UII5 783 aaPredicted RBP23.07■■□□□ 1.28
RAB40C-211ENST00000568586 METTL21EPA6NDL7 271 aa23.06■■□□□ 1.28
RAB40C-211ENST00000568586 OR5H14A6NHG9 310 aa23.06■■□□□ 1.28
RAB40C-211ENST00000568586 NOTOA8MTQ0 251 aa23.06■■□□□ 1.28
RAB40C-211ENST00000568586 NBR2O15453 112 aa23.06■■□□□ 1.28
RAB40C-211ENST00000568586 HSPA12AO43301 675 aa23.06■■□□□ 1.28
RAB40C-211ENST00000568586 IGHG4P01861 327 aa23.06■■□□□ 1.28
RAB40C-211ENST00000568586 ELANEP08246 267 aa23.06■■□□□ 1.28
RAB40C-211ENST00000568586 CD3GP09693 182 aa23.06■■□□□ 1.28
RAB40C-211ENST00000568586 HIST1H1DP16402 221 aaKnown RBP23.06■■□□□ 1.28
RAB40C-211ENST00000568586 GADD45AP24522 165 aa23.06■■□□□ 1.28
RAB40C-211ENST00000568586 A0A0B4J203 849 aa23.05■■□□□ 1.28
RAB40C-211ENST00000568586 FCGR3AP08637 254 aa23.05■■□□□ 1.28
RAB40C-211ENST00000568586 IGLL1P15814 213 aa23.05■■□□□ 1.28
RAB40C-211ENST00000568586 CNTFRP26992 372 aa23.05■■□□□ 1.28
RAB40C-211ENST00000568586 MC5RP33032 325 aa23.05■■□□□ 1.28
RAB40C-211ENST00000568586 SERPINB10P48595 397 aa23.05■■□□□ 1.28
RAB40C-211ENST00000568586 THBS3P49746 956 aa23.05■■□□□ 1.28
RAB40C-211ENST00000568586 SRSF7Q16629 238 aaKnown RBP eCLIP23.05■■□□□ 1.28
RAB40C-211ENST00000568586 C5orf64Q2M2E5 130 aa23.05■■□□□ 1.28
RAB40C-211ENST00000568586 RCC1LQ96I51 464 aaKnown RBP23.05■■□□□ 1.28
RAB40C-211ENST00000568586 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP23.05■■□□□ 1.28
RAB40C-211ENST00000568586 NECAP2Q9NVZ3 263 aa23.05■■□□□ 1.28
RAB40C-211ENST00000568586 H0YJW9 148 aa23.04■■□□□ 1.28
RAB40C-211ENST00000568586 SLC2A2P11168 524 aaPredicted RBP23.04■■□□□ 1.28
RAB40C-211ENST00000568586 KIR2DS1Q14954 304 aa23.04■■□□□ 1.28
RAB40C-211ENST00000568586 KCTD21Q4G0X4 260 aa23.04■■□□□ 1.28
RAB40C-211ENST00000568586 FAM131AQ6UXB0 335 aa23.04■■□□□ 1.28
RAB40C-211ENST00000568586 Q6ZS49 121 aa23.04■■□□□ 1.28
RAB40C-211ENST00000568586 C18orf65Q6ZTR6 163 aa23.04■■□□□ 1.28
RAB40C-211ENST00000568586 MRPL41Q8IXM3 137 aaKnown RBP23.04■■□□□ 1.28
RAB40C-211ENST00000568586 RNF5Q99942 180 aa23.04■■□□□ 1.28
RAB40C-211ENST00000568586 CABLES2Q9BTV7 478 aa23.04■■□□□ 1.28
RAB40C-211ENST00000568586 SSR3Q9UNL2 185 aa23.04■■□□□ 1.28
RAB40C-211ENST00000568586 FABP7O15540 132 aa23.03■■□□□ 1.28
RAB40C-211ENST00000568586 DUS4LO95620 317 aaKnown RBP23.03■■□□□ 1.28
RAB40C-211ENST00000568586 OR5H8P0DN80 308 aa23.03■■□□□ 1.28
RAB40C-211ENST00000568586 GNB3P16520 340 aa23.03■■□□□ 1.28
RAB40C-211ENST00000568586 MRPS15P82914 257 aaKnown RBP23.03■■□□□ 1.28
RAB40C-211ENST00000568586 ZNF695Q8IW36 515 aa23.03■■□□□ 1.28
RAB40C-211ENST00000568586 P2RX4Q99571 388 aa23.03■■□□□ 1.28
RAB40C-211ENST00000568586 RDH8Q9NYR8 311 aa23.03■■□□□ 1.28
RAB40C-211ENST00000568586 IGHV7-81A0A0B4J1V7 117 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms