RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 CD200R1LQ6Q8B3 271 aa11.48□□□□□ -0.57
FANCA-220ENST00000566409 ZNF695Q8IW36 515 aa11.48□□□□□ -0.57
FANCA-220ENST00000566409 KLHL30-AS1Q8NEE0 82 aa11.48□□□□□ -0.57
FANCA-220ENST00000566409 RCC1LQ96I51 464 aaKnown RBP11.48□□□□□ -0.57
FANCA-220ENST00000566409 ABHD14BQ96IU4 210 aa11.48□□□□□ -0.57
FANCA-220ENST00000566409 DUX3Q96PT4 197 aa11.48□□□□□ -0.57
FANCA-220ENST00000566409 P2RX4Q99571 388 aa11.48□□□□□ -0.57
FANCA-220ENST00000566409 C11orf54Q9H0W9 315 aaPredicted RBP11.48□□□□□ -0.57
FANCA-220ENST00000566409 RIMS4Q9H426 269 aaPredicted RBP11.48□□□□□ -0.57
FANCA-220ENST00000566409 Q9N2K0 584 aa11.48□□□□□ -0.57
FANCA-220ENST00000566409 NDUFB11Q9NX14 153 aa11.48□□□□□ -0.57
FANCA-220ENST00000566409 OR1A1Q9P1Q5 309 aa11.48□□□□□ -0.57
FANCA-220ENST00000566409 ZNF107Q9UII5 783 aaPredicted RBP11.48□□□□□ -0.57
FANCA-220ENST00000566409 KCNK7Q9Y2U2 307 aa11.48□□□□□ -0.57
FANCA-220ENST00000566409 TRAV1-2A0A0B4J238 106 aa11.47□□□□□ -0.57
FANCA-220ENST00000566409 IGKV1-6A0A0C4DH72 117 aa11.47□□□□□ -0.57
FANCA-220ENST00000566409 HLA-DRB3P79483 266 aa11.47□□□□□ -0.57
FANCA-220ENST00000566409 MOGAT2Q3SYC2 334 aa11.47□□□□□ -0.57
FANCA-220ENST00000566409 MOB1BQ7L9L4 216 aa11.47□□□□□ -0.57
FANCA-220ENST00000566409 NR2C2APQ86WQ0 139 aa11.47□□□□□ -0.57
FANCA-220ENST00000566409 MRAPQ8TCY5 172 aa11.47□□□□□ -0.57
FANCA-220ENST00000566409 RAX2Q96IS3 184 aa11.47□□□□□ -0.57
FANCA-220ENST00000566409 STEAP1Q9UHE8 339 aa11.47□□□□□ -0.57
FANCA-220ENST00000566409 BLOC1S6Q9UL45 172 aa11.47□□□□□ -0.57
FANCA-220ENST00000566409 DNAH9Q9NYC9 4486 aa11.47□□□□□ -0.57
FANCA-220ENST00000566409 TRDV1A0A1B0GX56 115 aa11.46□□□□□ -0.57
FANCA-220ENST00000566409 NUDT19A8MXV4 375 aa11.46□□□□□ -0.57
FANCA-220ENST00000566409 ITGB1BP1O14713 200 aa11.46□□□□□ -0.57
FANCA-220ENST00000566409 DENRO43583 198 aaKnown RBP11.46□□□□□ -0.57
FANCA-220ENST00000566409 IGHG4P01861 327 aa11.46□□□□□ -0.57
FANCA-220ENST00000566409 SNRPBP14678 240 aaKnown RBP11.46□□□□□ -0.57
FANCA-220ENST00000566409 SLC6A1P30531 599 aa11.46□□□□□ -0.57
FANCA-220ENST00000566409 CEACAM6P40199 344 aa11.46□□□□□ -0.57
FANCA-220ENST00000566409 PSMD7P51665 324 aa11.46□□□□□ -0.57
FANCA-220ENST00000566409 FOXE3Q13461 319 aa11.46□□□□□ -0.57
FANCA-220ENST00000566409 DEFB136Q30KP8 78 aa11.46□□□□□ -0.57
FANCA-220ENST00000566409 FAM71F2Q6NXP2 309 aa11.46□□□□□ -0.57
FANCA-220ENST00000566409 GLDNQ6ZMI3 551 aaPredicted RBP11.46□□□□□ -0.57
FANCA-220ENST00000566409 NPBQ8NG41 125 aa11.46□□□□□ -0.57
FANCA-220ENST00000566409 KCTD7Q96MP8 289 aa11.46□□□□□ -0.57
FANCA-220ENST00000566409 GON7Q9BXV9 100 aa11.46□□□□□ -0.57
FANCA-220ENST00000566409 C12orf4Q9NQ89 552 aa11.46□□□□□ -0.57
FANCA-220ENST00000566409 PIPOXQ9P0Z9 390 aa11.46□□□□□ -0.57
FANCA-220ENST00000566409 ZNF580Q9UK33 172 aa11.46□□□□□ -0.57
FANCA-220ENST00000566409 IGHV7-81A0A0B4J1V7 117 aa11.45□□□□□ -0.58
FANCA-220ENST00000566409 A0A0B4J203 849 aa11.45□□□□□ -0.58
FANCA-220ENST00000566409 IFITM5A6NNB3 132 aa11.45□□□□□ -0.58
FANCA-220ENST00000566409 G3V318 75 aa11.45□□□□□ -0.58
FANCA-220ENST00000566409 K7EIL1 84 aa11.45□□□□□ -0.58
FANCA-220ENST00000566409 RAB29O14966 203 aa11.45□□□□□ -0.58
FANCA-220ENST00000566409 NBR2O15453 112 aa11.45□□□□□ -0.58
FANCA-220ENST00000566409 NDUFA3O95167 84 aa11.45□□□□□ -0.58
FANCA-220ENST00000566409 HLA-DRB1P01911 266 aa11.45□□□□□ -0.58
FANCA-220ENST00000566409 ELANEP08246 267 aa11.45□□□□□ -0.58
FANCA-220ENST00000566409 ZBTB25P24278 435 aa11.45□□□□□ -0.58
FANCA-220ENST00000566409 PSMB8P28062 276 aa11.45□□□□□ -0.58
FANCA-220ENST00000566409 PPIFP30405 207 aaKnown RBP11.45□□□□□ -0.58
FANCA-220ENST00000566409 HOXD3P31249 432 aaPredicted RBP11.45□□□□□ -0.58
FANCA-220ENST00000566409 MYCNOSP40205 109 aa11.45□□□□□ -0.58
FANCA-220ENST00000566409 CDX1P47902 265 aaPredicted RBP11.45□□□□□ -0.58
FANCA-220ENST00000566409 LINC00205P59089 165 aa11.45□□□□□ -0.58
FANCA-220ENST00000566409 GABARAPL2P60520 117 aa11.45□□□□□ -0.58
FANCA-220ENST00000566409 EGFEM1PQ0D2K5 195 aa11.45□□□□□ -0.58
FANCA-220ENST00000566409 KIAA0141Q14154 515 aaPredicted RBP11.45□□□□□ -0.58
FANCA-220ENST00000566409 C5orf64Q2M2E5 130 aa11.45□□□□□ -0.58
FANCA-220ENST00000566409 FAM131AQ6UXB0 335 aa11.45□□□□□ -0.58
FANCA-220ENST00000566409 SPARTQ8N0X7 666 aa11.45□□□□□ -0.58
FANCA-220ENST00000566409 OR56B1Q8NGI3 324 aa11.45□□□□□ -0.58
FANCA-220ENST00000566409 PTX4Q96A99 478 aa11.45□□□□□ -0.58
FANCA-220ENST00000566409 CMSS1Q9BQ75 279 aaKnown RBP11.45□□□□□ -0.58
FANCA-220ENST00000566409 RAB22AQ9UL26 194 aa11.45□□□□□ -0.58
FANCA-220ENST00000566409 RNF150Q9ULK6 438 aa11.45□□□□□ -0.58
FANCA-220ENST00000566409 WSB1Q9Y6I7 421 aa11.45□□□□□ -0.58
FANCA-220ENST00000566409 WI2-2373I1.2A0A1W2PRP0 233 aa11.44□□□□□ -0.58
FANCA-220ENST00000566409 H0YJW9 148 aa11.44□□□□□ -0.58
FANCA-220ENST00000566409 RAB27BO00194 218 aa11.44□□□□□ -0.58
FANCA-220ENST00000566409 ATP6V0E1O15342 81 aa11.44□□□□□ -0.58
FANCA-220ENST00000566409 RRP9O43818 475 aaKnown RBP11.44□□□□□ -0.58
FANCA-220ENST00000566409 DUS4LO95620 317 aaKnown RBP11.44□□□□□ -0.58
FANCA-220ENST00000566409 VDAC1P21796 283 aa11.44□□□□□ -0.58
FANCA-220ENST00000566409 CXorf66Q5JRM2 361 aaPredicted RBP11.44□□□□□ -0.58
FANCA-220ENST00000566409 UBE2UQ5VVX9 321 aa11.44□□□□□ -0.58
FANCA-220ENST00000566409 C22orf42Q6IC83 251 aa11.44□□□□□ -0.58
FANCA-220ENST00000566409 OR5AN1Q8NGI8 311 aa11.44□□□□□ -0.58
FANCA-220ENST00000566409 MYOZ3Q8TDC0 251 aa11.44□□□□□ -0.58
FANCA-220ENST00000566409 KLK15Q9H2R5 256 aa11.44□□□□□ -0.58
FANCA-220ENST00000566409 OR51J1Q9H342 316 aa11.44□□□□□ -0.58
FANCA-220ENST00000566409 MGAT4AQ9UM21 535 aa11.44□□□□□ -0.58
FANCA-220ENST00000566409 TRDCB7Z8K6 153 aa11.43□□□□□ -0.58
FANCA-220ENST00000566409 CCL24O00175 119 aa11.43□□□□□ -0.58
FANCA-220ENST00000566409 FCN1O00602 326 aa11.43□□□□□ -0.58
FANCA-220ENST00000566409 PDCD5O14737 125 aa11.43□□□□□ -0.58
FANCA-220ENST00000566409 MRPS14O60783 128 aaKnown RBP11.43□□□□□ -0.58
FANCA-220ENST00000566409 CD3GP09693 182 aa11.43□□□□□ -0.58
FANCA-220ENST00000566409 NDPQ00604 133 aa11.43□□□□□ -0.58
FANCA-220ENST00000566409 KIR2DS1Q14954 304 aa11.43□□□□□ -0.58
FANCA-220ENST00000566409 LIN54Q6MZP7 749 aa11.43□□□□□ -0.58
FANCA-220ENST00000566409 ZNF383Q8NA42 475 aa11.43□□□□□ -0.58
FANCA-220ENST00000566409 DRAXINQ8NBI3 349 aaPredicted RBP11.43□□□□□ -0.58
FANCA-220ENST00000566409 OR10R2Q8NGX6 335 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms