RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 HSPA12AO43301 675 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 HOXA3O43365 443 aaPredicted RBP6.57□□□□□ -1.36
CDH13-208ENST00000566333 PROP1O75360 226 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 VENTXO95231 258 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 IGLV2-14P01704 120 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 CD74P04233 296 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 CTXN2P0C2S0 81 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 OR5H8P0DN80 308 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 NFYAP23511 347 aaPredicted RBP6.57□□□□□ -1.36
CDH13-208ENST00000566333 HLA-DMAP28067 261 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 CEACAM6P40199 344 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 IER3P46695 156 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 REG1BP48304 166 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 RFX2P48378 723 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 DYNLT3P51808 116 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 PRRX1P54821 245 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 LGALS4P56470 323 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 TAS2R46P59540 309 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 ACTBP60709 375 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 ACTG1P63261 375 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 SRSF2Q01130 221 aaKnown RBP6.57□□□□□ -1.36
CDH13-208ENST00000566333 SSBP1Q04837 148 aaKnown RBP6.57□□□□□ -1.36
CDH13-208ENST00000566333 DYRK1AQ13627 763 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 SLC9A3R2Q15599 337 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 AANATQ16613 207 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 LRRC75BQ2VPJ9 315 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 PLA1AQ53H76 456 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 RPL39P5Q59GN2 51 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 FAM71F2Q6NXP2 309 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 OVCH2Q7RTZ1 564 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 LYG1Q8N1E2 194 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 OR4D10Q8NGI6 311 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 C15orf40Q8WUR7 153 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 FCAMRQ8WWV6 532 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 EDARADDQ8WWZ3 215 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 RPEQ96AT9 228 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 CREB3L1Q96BA8 519 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 RBMXL1Q96E39 390 aaKnown RBP6.57□□□□□ -1.36
CDH13-208ENST00000566333 ABHD14BQ96IU4 210 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 DUX5Q96PT3 197 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 GINS4Q9BRT9 223 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 MRPL20Q9BYC9 149 aaKnown RBP6.57□□□□□ -1.36
CDH13-208ENST00000566333 FXYD6Q9H0Q3 95 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 OR2D2Q9H210 308 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 NECAP2Q9NVZ3 263 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 EHFQ9NZC4 300 aa6.57□□□□□ -1.36
CDH13-208ENST00000566333 ZNF107Q9UII5 783 aaPredicted RBP6.57□□□□□ -1.36
CDH13-208ENST00000566333 A0A0A6YYJ9 748 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 IGHV1-3A0A0C4DH29 117 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 OOSP1A8MZH6 123 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 H3BUX3 64 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 CLDN34H7C241 214 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 M0QYG6 137 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 TIMM23O14925 209 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 CHST1O43916 411 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 PPYP01298 95 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 PMP2P02689 132 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 CD3DP04234 171 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 AADACP22760 399 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 PTBP1P26599 531 aaKnown RBP eCLIP6.56□□□□□ -1.36
CDH13-208ENST00000566333 IL3RAP26951 378 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 FCGR2CP31995 323 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 CEACAM3P40198 252 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 RAB7AP51149 207 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 UBA52P62987 128 aaKnown RBP6.56□□□□□ -1.36
CDH13-208ENST00000566333 EIF4EBP1Q13541 118 aaPredicted RBP6.56□□□□□ -1.36
CDH13-208ENST00000566333 SPANXN2Q5MJ10 180 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 VAX1Q5SQQ9 334 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 CCBE1Q6UXH8 406 aaPredicted RBP6.56□□□□□ -1.36
CDH13-208ENST00000566333 LINC00299Q6ZSB3 139 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 OR8H3Q8N146 312 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 TMEM86BQ8N661 226 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 OR5H2Q8NGV7 314 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 OR56B4Q8NH76 319 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 ZNF418Q8TF45 676 aaPredicted RBP6.56□□□□□ -1.36
CDH13-208ENST00000566333 FAM216AQ8WUB2 273 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 SSMEM1Q8WWF3 244 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 CHIAQ9BZP6 476 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 TINAGL1Q9GZM7 467 aaPredicted RBP6.56□□□□□ -1.36
CDH13-208ENST00000566333 FAM96BQ9Y3D0 163 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 OR2W1Q9Y3N9 320 aa6.56□□□□□ -1.36
CDH13-208ENST00000566333 ANKRD20A5PA0PJZ0 165 aa6.55□□□□□ -1.36
CDH13-208ENST00000566333 FAM90A9PA6NNJ1 464 aa6.55□□□□□ -1.36
CDH13-208ENST00000566333 ZNF736B4DX44 427 aaPredicted RBP6.55□□□□□ -1.36
CDH13-208ENST00000566333 RAB29O14966 203 aa6.55□□□□□ -1.36
CDH13-208ENST00000566333 TXNL1O43396 289 aa6.55□□□□□ -1.36
CDH13-208ENST00000566333 TCF21O43680 179 aa6.55□□□□□ -1.36
CDH13-208ENST00000566333 RBBP9O75884 186 aa6.55□□□□□ -1.36
CDH13-208ENST00000566333 RNASE1P07998 156 aaKnown RBP6.55□□□□□ -1.36
CDH13-208ENST00000566333 OR8U9P0C7N5 309 aa6.55□□□□□ -1.36
CDH13-208ENST00000566333 ZNF735P0CB33 412 aa6.55□□□□□ -1.36
CDH13-208ENST00000566333 TBPP20226 339 aa6.55□□□□□ -1.36
CDH13-208ENST00000566333 RAB13P51153 203 aa6.55□□□□□ -1.36
CDH13-208ENST00000566333 LINC00205P59089 165 aa6.55□□□□□ -1.36
CDH13-208ENST00000566333 BAMBIQ13145 260 aa6.55□□□□□ -1.36
CDH13-208ENST00000566333 LSAMPQ13449 338 aa6.55□□□□□ -1.36
CDH13-208ENST00000566333 KLF9Q13886 244 aaPredicted RBP6.55□□□□□ -1.36
CDH13-208ENST00000566333 ACTBL2Q562R1 376 aa6.55□□□□□ -1.36
CDH13-208ENST00000566333 PYDC2Q56P42 97 aa6.55□□□□□ -1.36
CDH13-208ENST00000566333 CCDC144NLQ6NUI1 221 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms