RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 C6orf201Q7Z4U5 140 aa11.85□□□□□ -0.51
CMTM3-212ENST00000566121 OR5AN1Q8NGI8 311 aa11.85□□□□□ -0.51
CMTM3-212ENST00000566121 EDARADDQ8WWZ3 215 aa11.85□□□□□ -0.51
CMTM3-212ENST00000566121 TMED9Q9BVK6 235 aa11.85□□□□□ -0.51
CMTM3-212ENST00000566121 ANKRD60Q9BZ19 345 aa11.85□□□□□ -0.51
CMTM3-212ENST00000566121 PLEKHJ1Q9NW61 149 aa11.85□□□□□ -0.51
CMTM3-212ENST00000566121 DNAH7Q8WXX0 4024 aa11.85□□□□□ -0.51
CMTM3-212ENST00000566121 SORL1Q92673 2214 aa11.84□□□□□ -0.51
CMTM3-212ENST00000566121 SAA2-SAA4A0A096LPE2 208 aa11.84□□□□□ -0.51
CMTM3-212ENST00000566121 IGHV7-81A0A0B4J1V7 117 aa11.84□□□□□ -0.51
CMTM3-212ENST00000566121 I3L521 148 aa11.84□□□□□ -0.51
CMTM3-212ENST00000566121 NHLRC4P0CG21 123 aaPredicted RBP11.84□□□□□ -0.51
CMTM3-212ENST00000566121 SAA2P0DJI9 122 aaPredicted RBP11.84□□□□□ -0.51
CMTM3-212ENST00000566121 ARSBP15848 533 aa11.84□□□□□ -0.51
CMTM3-212ENST00000566121 CPEP16870 476 aa11.84□□□□□ -0.51
CMTM3-212ENST00000566121 LUMP51884 338 aaPredicted RBP11.84□□□□□ -0.51
CMTM3-212ENST00000566121 MLLT11Q13015 90 aaPredicted RBP11.84□□□□□ -0.51
CMTM3-212ENST00000566121 MED22Q15528 200 aa11.84□□□□□ -0.51
CMTM3-212ENST00000566121 C9orf66Q5T8R8 295 aa11.84□□□□□ -0.51
CMTM3-212ENST00000566121 OR10K2Q6IF99 312 aa11.84□□□□□ -0.51
CMTM3-212ENST00000566121 CD200R1LQ6Q8B3 271 aa11.84□□□□□ -0.51
CMTM3-212ENST00000566121 ZNF491Q8N8L2 437 aa11.84□□□□□ -0.51
CMTM3-212ENST00000566121 MRPL20Q9BYC9 149 aaKnown RBP11.84□□□□□ -0.51
CMTM3-212ENST00000566121 GAB2Q9UQC2 676 aa11.84□□□□□ -0.51
CMTM3-212ENST00000566121 VSIG4Q9Y279 399 aa11.84□□□□□ -0.51
CMTM3-212ENST00000566121 A0A0A6YYD4 124 aa11.83□□□□□ -0.52
CMTM3-212ENST00000566121 ARPC1BO15143 372 aaKnown RBP11.83□□□□□ -0.52
CMTM3-212ENST00000566121 LDLRAD4O15165 306 aa11.83□□□□□ -0.52
CMTM3-212ENST00000566121 CT45A6P0DMU7 189 aa11.83□□□□□ -0.52
CMTM3-212ENST00000566121 CT45A5P0DMU8 189 aa11.83□□□□□ -0.52
CMTM3-212ENST00000566121 CT45A7P0DMV0 189 aa11.83□□□□□ -0.52
CMTM3-212ENST00000566121 ZBTB25P24278 435 aa11.83□□□□□ -0.52
CMTM3-212ENST00000566121 HOXD3P31249 432 aaPredicted RBP11.83□□□□□ -0.52
CMTM3-212ENST00000566121 TMEM50BP56557 158 aa11.83□□□□□ -0.52
CMTM3-212ENST00000566121 NKAPLQ5M9Q1 402 aa11.83□□□□□ -0.52
CMTM3-212ENST00000566121 LIPKQ5VXJ0 399 aa11.83□□□□□ -0.52
CMTM3-212ENST00000566121 LCNL1Q6ZST4 164 aa11.83□□□□□ -0.52
CMTM3-212ENST00000566121 RITA1Q96K30 269 aa11.83□□□□□ -0.52
CMTM3-212ENST00000566121 CENPOQ9BU64 300 aa11.83□□□□□ -0.52
CMTM3-212ENST00000566121 ACOT13Q9NPJ3 140 aa11.83□□□□□ -0.52
CMTM3-212ENST00000566121 KIAA1456Q9P272 454 aa11.83□□□□□ -0.52
CMTM3-212ENST00000566121 LSM4Q9Y4Z0 139 aaKnown RBP11.83□□□□□ -0.52
CMTM3-212ENST00000566121 HUWE1Q7Z6Z7 4374 aaKnown RBP11.83□□□□□ -0.52
CMTM3-212ENST00000566121 RGS10O43665 173 aa11.82□□□□□ -0.52
CMTM3-212ENST00000566121 CRHBPP24387 322 aa11.82□□□□□ -0.52
CMTM3-212ENST00000566121 OR3A3P47888 321 aa11.82□□□□□ -0.52
CMTM3-212ENST00000566121 RAB9AP51151 201 aa11.82□□□□□ -0.52
CMTM3-212ENST00000566121 AKIRIN2Q53H80 203 aa11.82□□□□□ -0.52
CMTM3-212ENST00000566121 DEFB121Q5J5C9 76 aa11.82□□□□□ -0.52
CMTM3-212ENST00000566121 GFI1Q99684 422 aa11.82□□□□□ -0.52
CMTM3-212ENST00000566121 NICN1Q9BSH3 213 aa11.82□□□□□ -0.52
CMTM3-212ENST00000566121 Q9N2K0 584 aa11.82□□□□□ -0.52
CMTM3-212ENST00000566121 NKX1-2Q9UD57 310 aaPredicted RBP11.82□□□□□ -0.52
CMTM3-212ENST00000566121 SCOCQ9UIL1 159 aa11.82□□□□□ -0.52
CMTM3-212ENST00000566121 NUBP2Q9Y5Y2 271 aa11.82□□□□□ -0.52
CMTM3-212ENST00000566121 TRAV1-2A0A0B4J238 106 aa11.81□□□□□ -0.52
CMTM3-212ENST00000566121 TRAV41A0A0B4J266 112 aa11.81□□□□□ -0.52
CMTM3-212ENST00000566121 H0YJW9 148 aa11.81□□□□□ -0.52
CMTM3-212ENST00000566121 RRHO14718 337 aa11.81□□□□□ -0.52
CMTM3-212ENST00000566121 SPDEFO95238 335 aa11.81□□□□□ -0.52
CMTM3-212ENST00000566121 BRI3O95415 125 aa11.81□□□□□ -0.52
CMTM3-212ENST00000566121 OR8U8P0C7N1 319 aa11.81□□□□□ -0.52
CMTM3-212ENST00000566121 GALP22466 123 aa11.81□□□□□ -0.52
CMTM3-212ENST00000566121 SERPINB10P48595 397 aa11.81□□□□□ -0.52
CMTM3-212ENST00000566121 TMEM267Q0VDI3 215 aaPredicted RBP11.81□□□□□ -0.52
CMTM3-212ENST00000566121 P2RY14Q15391 338 aa11.81□□□□□ -0.52
CMTM3-212ENST00000566121 SRSF7Q16629 238 aaKnown RBP eCLIP11.81□□□□□ -0.52
CMTM3-212ENST00000566121 PYHIN1Q6K0P9 492 aa11.81□□□□□ -0.52
CMTM3-212ENST00000566121 TMEM65Q6PI78 240 aa11.81□□□□□ -0.52
CMTM3-212ENST00000566121 ZNF562Q6V9R5 426 aa11.81□□□□□ -0.52
CMTM3-212ENST00000566121 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.81□□□□□ -0.52
CMTM3-212ENST00000566121 OR56B1Q8NGI3 324 aa11.81□□□□□ -0.52
CMTM3-212ENST00000566121 NRG4Q8WWG1 115 aa11.81□□□□□ -0.52
CMTM3-212ENST00000566121 MGLLQ99685 303 aa11.81□□□□□ -0.52
CMTM3-212ENST00000566121 C12orf4Q9NQ89 552 aa11.81□□□□□ -0.52
CMTM3-212ENST00000566121 ATP6V0E1O15342 81 aa11.8□□□□□ -0.52
CMTM3-212ENST00000566121 SOCS1O15524 211 aa11.8□□□□□ -0.52
CMTM3-212ENST00000566121 MRPS14O60783 128 aaKnown RBP11.8□□□□□ -0.52
CMTM3-212ENST00000566121 HSPA13P48723 471 aa11.8□□□□□ -0.52
CMTM3-212ENST00000566121 AQP4P55087 323 aa11.8□□□□□ -0.52
CMTM3-212ENST00000566121 HLA-DRB3P79483 266 aa11.8□□□□□ -0.52
CMTM3-212ENST00000566121 TAGLNQ01995 201 aaKnown RBP11.8□□□□□ -0.52
CMTM3-212ENST00000566121 RAB11BQ15907 218 aa11.8□□□□□ -0.52
CMTM3-212ENST00000566121 C5orf24Q7Z6I8 188 aa11.8□□□□□ -0.52
CMTM3-212ENST00000566121 OR11H1Q8NG94 326 aa11.8□□□□□ -0.52
CMTM3-212ENST00000566121 FAM3DQ96BQ1 224 aa11.8□□□□□ -0.52
CMTM3-212ENST00000566121 CYYR1Q96J86 154 aa11.8□□□□□ -0.52
CMTM3-212ENST00000566121 C11orf54Q9H0W9 315 aaPredicted RBP11.8□□□□□ -0.52
CMTM3-212ENST00000566121 KLK15Q9H2R5 256 aa11.8□□□□□ -0.52
CMTM3-212ENST00000566121 VCX3BQ9H321 246 aa11.8□□□□□ -0.52
CMTM3-212ENST00000566121 AK3Q9UIJ7 227 aa11.8□□□□□ -0.52
CMTM3-212ENST00000566121 RAB22AQ9UL26 194 aa11.8□□□□□ -0.52
CMTM3-212ENST00000566121 RNF150Q9ULK6 438 aa11.8□□□□□ -0.52
CMTM3-212ENST00000566121 WASHC3Q9Y3C0 194 aa11.8□□□□□ -0.52
CMTM3-212ENST00000566121 PROP1O75360 226 aa11.79□□□□□ -0.52
CMTM3-212ENST00000566121 SLC2A2P11168 524 aaPredicted RBP11.79□□□□□ -0.52
CMTM3-212ENST00000566121 CEACAM6P40199 344 aa11.79□□□□□ -0.52
CMTM3-212ENST00000566121 CX3CL1P78423 397 aa11.79□□□□□ -0.52
CMTM3-212ENST00000566121 ZNF616Q08AN1 781 aa11.79□□□□□ -0.52
CMTM3-212ENST00000566121 TBCEQ15813 527 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms