RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 DLX6P56179 175 aa15.69■□□□□ 0.1
CSPG4P13-201ENST00000565545 GNMTQ14749 295 aa15.69■□□□□ 0.1
CSPG4P13-201ENST00000565545 KCTD9Q7L273 389 aa15.69■□□□□ 0.1
CSPG4P13-201ENST00000565545 AKAP14Q86UN6 197 aa15.69■□□□□ 0.1
CSPG4P13-201ENST00000565545 C12orf45Q8N5I9 185 aaPredicted RBP15.69■□□□□ 0.1
CSPG4P13-201ENST00000565545 LY6G5BQ8NDX9 201 aa15.69■□□□□ 0.1
CSPG4P13-201ENST00000565545 OR52B4Q8NGK2 314 aa15.69■□□□□ 0.1
CSPG4P13-201ENST00000565545 MITD1Q8WV92 249 aa15.69■□□□□ 0.1
CSPG4P13-201ENST00000565545 RTN4IP1Q8WWV3 396 aaPredicted RBP15.69■□□□□ 0.1
CSPG4P13-201ENST00000565545 PHB2Q99623 299 aa15.69■□□□□ 0.1
CSPG4P13-201ENST00000565545 BPESC1Q9GZL8 116 aa15.69■□□□□ 0.1
CSPG4P13-201ENST00000565545 NAA60Q9H7X0 242 aa15.69■□□□□ 0.1
CSPG4P13-201ENST00000565545 CCL28Q9NRJ3 127 aa15.69■□□□□ 0.1
CSPG4P13-201ENST00000565545 SHPKQ9UHJ6 478 aa15.69■□□□□ 0.1
CSPG4P13-201ENST00000565545 YLPM1P49750 1951 aaKnown RBP15.68■□□□□ 0.1
CSPG4P13-201ENST00000565545 IGHV3-43A0A0B4J1X8 118 aa15.68■□□□□ 0.1
CSPG4P13-201ENST00000565545 C17orf98A8MV24 154 aa15.68■□□□□ 0.1
CSPG4P13-201ENST00000565545 IGHV2-5P01817 119 aa15.68■□□□□ 0.1
CSPG4P13-201ENST00000565545 OR8U9P0C7N5 309 aa15.68■□□□□ 0.1
CSPG4P13-201ENST00000565545 IGHV3-43DP0DP04 118 aa15.68■□□□□ 0.1
CSPG4P13-201ENST00000565545 VAMP1P23763 118 aa15.68■□□□□ 0.1
CSPG4P13-201ENST00000565545 PHLDA2Q53GA4 152 aa15.68■□□□□ 0.1
CSPG4P13-201ENST00000565545 ZNF818PQ6ZRF7 136 aa15.68■□□□□ 0.1
CSPG4P13-201ENST00000565545 LDLRAD3Q86YD5 345 aa15.68■□□□□ 0.1
CSPG4P13-201ENST00000565545 ZNF645Q8N7E2 425 aa15.68■□□□□ 0.1
CSPG4P13-201ENST00000565545 OR2AK2Q8NG84 335 aa15.68■□□□□ 0.1
CSPG4P13-201ENST00000565545 OR8U1Q8NH10 309 aa15.68■□□□□ 0.1
CSPG4P13-201ENST00000565545 GALNT14Q96FL9 552 aa15.68■□□□□ 0.1
CSPG4P13-201ENST00000565545 NEURL2Q9BR09 285 aa15.68■□□□□ 0.1
CSPG4P13-201ENST00000565545 GAB2Q9UQC2 676 aa15.68■□□□□ 0.1
CSPG4P13-201ENST00000565545 PPIAL4CA0A0B4J2A2 164 aa15.67■□□□□ 0.1
CSPG4P13-201ENST00000565545 hCG_1809904A0A1W2PP81 198 aa15.67■□□□□ 0.1
CSPG4P13-201ENST00000565545 A0A1W2PPE2 198 aa15.67■□□□□ 0.1
CSPG4P13-201ENST00000565545 A0A1W2PR64 198 aa15.67■□□□□ 0.1
CSPG4P13-201ENST00000565545 A0A1W2PRV1 198 aa15.67■□□□□ 0.1
CSPG4P13-201ENST00000565545 VWC2LB2RUY7 222 aa15.67■□□□□ 0.1
CSPG4P13-201ENST00000565545 HSD17B6O14756 317 aa15.67■□□□□ 0.1
CSPG4P13-201ENST00000565545 MPPED1O15442 326 aa15.67■□□□□ 0.1
CSPG4P13-201ENST00000565545 B3GALNT1O75752 331 aa15.67■□□□□ 0.1
CSPG4P13-201ENST00000565545 IFNA2P01563 188 aa15.67■□□□□ 0.1
CSPG4P13-201ENST00000565545 LIPFP07098 398 aa15.67■□□□□ 0.1
CSPG4P13-201ENST00000565545 SULT1A3P0DMM9 295 aa15.67■□□□□ 0.1
CSPG4P13-201ENST00000565545 SULT1A4P0DMN0 295 aa15.67■□□□□ 0.1
CSPG4P13-201ENST00000565545 PPIAL4GP0DN37 164 aa15.67■□□□□ 0.1
CSPG4P13-201ENST00000565545 CCL3L1P16619 93 aa15.67■□□□□ 0.1
CSPG4P13-201ENST00000565545 OMGP23515 440 aa15.67■□□□□ 0.1
CSPG4P13-201ENST00000565545 CD34P28906 385 aa15.67■□□□□ 0.1
CSPG4P13-201ENST00000565545 SUPT4H1P63272 117 aaKnown RBP15.67■□□□□ 0.1
CSPG4P13-201ENST00000565545 LTC4SQ16873 150 aa15.67■□□□□ 0.1
CSPG4P13-201ENST00000565545 COQ8AQ8NI60 647 aa15.67■□□□□ 0.1
CSPG4P13-201ENST00000565545 SUCNR1Q9BXA5 334 aa15.67■□□□□ 0.1
CSPG4P13-201ENST00000565545 PARP12Q9H0J9 701 aaKnown RBP15.67■□□□□ 0.1
CSPG4P13-201ENST00000565545 NARFLQ9H6Q4 476 aa15.67■□□□□ 0.1
CSPG4P13-201ENST00000565545 COL6A5A8TX70 2615 aa15.67■□□□□ 0.1
CSPG4P13-201ENST00000565545 MALRD1Q5VYJ5 2156 aa15.66■□□□□ 0.1
CSPG4P13-201ENST00000565545 LOC105371242A0A075B767 164 aa15.66■□□□□ 0.1
CSPG4P13-201ENST00000565545 A8MXK9 166 aa15.66■□□□□ 0.1
CSPG4P13-201ENST00000565545 CCNKO75909 580 aa15.66■□□□□ 0.1
CSPG4P13-201ENST00000565545 FCN2Q15485 313 aa15.66■□□□□ 0.1
CSPG4P13-201ENST00000565545 PRAMEF5Q5TYX0 476 aa15.66■□□□□ 0.1
CSPG4P13-201ENST00000565545 C8orf31Q8N9H6 132 aa15.66■□□□□ 0.1
CSPG4P13-201ENST00000565545 AGMATQ9BSE5 352 aa15.66■□□□□ 0.1
CSPG4P13-201ENST00000565545 KCNS2Q9ULS6 477 aa15.66■□□□□ 0.1
CSPG4P13-201ENST00000565545 A0A087X0M5 115 aa15.65■□□□□ 0.1
CSPG4P13-201ENST00000565545 PIGBOS1A0A0B4J2F0 54 aa15.65■□□□□ 0.1
CSPG4P13-201ENST00000565545 A0A1B0GX30 115 aa15.65■□□□□ 0.1
CSPG4P13-201ENST00000565545 RNF212BA8MTL3 300 aa15.65■□□□□ 0.1
CSPG4P13-201ENST00000565545 CRLF1O75462 422 aa15.65■□□□□ 0.1
CSPG4P13-201ENST00000565545 PGLYRP1O75594 196 aaPredicted RBP15.65■□□□□ 0.1
CSPG4P13-201ENST00000565545 NFYBP25208 207 aa15.65■□□□□ 0.1
CSPG4P13-201ENST00000565545 LMO4P61968 165 aa15.65■□□□□ 0.1
CSPG4P13-201ENST00000565545 ZNF439Q8NDP4 499 aa15.65■□□□□ 0.1
CSPG4P13-201ENST00000565545 CLDND2Q8NHS1 167 aa15.65■□□□□ 0.1
CSPG4P13-201ENST00000565545 CASTOR1Q8WTX7 329 aa15.65■□□□□ 0.1
CSPG4P13-201ENST00000565545 ABHD14AQ9BUJ0 271 aa15.65■□□□□ 0.1
CSPG4P13-201ENST00000565545 OR2D2Q9H210 308 aa15.65■□□□□ 0.1
CSPG4P13-201ENST00000565545 PSG11Q9UQ72 335 aa15.65■□□□□ 0.1
CSPG4P13-201ENST00000565545 SESN1Q9Y6P5 492 aa15.65■□□□□ 0.1
CSPG4P13-201ENST00000565545 ATRQ13535 2644 aa15.65■□□□□ 0.1
CSPG4P13-201ENST00000565545 C3orf85A0A1B0GTC6 90 aa15.64■□□□□ 0.09
CSPG4P13-201ENST00000565545 MMP23AO75900 390 aa15.64■□□□□ 0.09
CSPG4P13-201ENST00000565545 IGLV2-14P01704 120 aa15.64■□□□□ 0.09
CSPG4P13-201ENST00000565545 HLA-GP17693 338 aa15.64■□□□□ 0.09
CSPG4P13-201ENST00000565545 SRPXP78539 464 aa15.64■□□□□ 0.09
CSPG4P13-201ENST00000565545 SLC9A3R2Q15599 337 aa15.64■□□□□ 0.09
CSPG4P13-201ENST00000565545 TBC1D26Q86UD7 250 aa15.64■□□□□ 0.09
CSPG4P13-201ENST00000565545 DRAM1Q8N682 238 aa15.64■□□□□ 0.09
CSPG4P13-201ENST00000565545 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.64■□□□□ 0.09
CSPG4P13-201ENST00000565545 ASB13Q8WXK3 278 aa15.64■□□□□ 0.09
CSPG4P13-201ENST00000565545 C22orf46C9J442 243 aa15.63■□□□□ 0.09
CSPG4P13-201ENST00000565545 M0R1W7 72 aa15.63■□□□□ 0.09
CSPG4P13-201ENST00000565545 ST8SIA5O15466 376 aa15.63■□□□□ 0.09
CSPG4P13-201ENST00000565545 PHF1O43189 567 aaPredicted RBP15.63■□□□□ 0.09
CSPG4P13-201ENST00000565545 ENSAO43768 121 aaKnown RBP15.63■□□□□ 0.09
CSPG4P13-201ENST00000565545 FOXH1O75593 365 aa15.63■□□□□ 0.09
CSPG4P13-201ENST00000565545 IGHV1-8P0DP01 117 aa15.63■□□□□ 0.09
CSPG4P13-201ENST00000565545 SLC25A16P16260 332 aa15.63■□□□□ 0.09
CSPG4P13-201ENST00000565545 GPR12P47775 334 aa15.63■□□□□ 0.09
CSPG4P13-201ENST00000565545 TMEM187Q14656 261 aa15.63■□□□□ 0.09
CSPG4P13-201ENST00000565545 FAM53AQ6NSI3 398 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms