RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 TMEM213A2RRL7 107 aa1.8□□□□□ -2.12
CHD9-215ENST00000565442 FTCDNL1E5RQL4 147 aa1.8□□□□□ -2.12
CHD9-215ENST00000565442 TRAPPC3O43617 180 aa1.8□□□□□ -2.12
CHD9-215ENST00000565442 LY6HO94772 140 aa1.8□□□□□ -2.12
CHD9-215ENST00000565442 HBZP02008 142 aa1.8□□□□□ -2.12
CHD9-215ENST00000565442 ORM1P02763 201 aa1.8□□□□□ -2.12
CHD9-215ENST00000565442 ESDP10768 282 aa1.8□□□□□ -2.12
CHD9-215ENST00000565442 SLC25A16P16260 332 aa1.8□□□□□ -2.12
CHD9-215ENST00000565442 CLDN12P56749 244 aa1.8□□□□□ -2.12
CHD9-215ENST00000565442 CLEC12BQ2HXU8 276 aa1.8□□□□□ -2.12
CHD9-215ENST00000565442 RASL11AQ6T310 242 aa1.8□□□□□ -2.12
CHD9-215ENST00000565442 SCGB1D4Q6XE38 83 aa1.8□□□□□ -2.12
CHD9-215ENST00000565442 CCDC121Q6ZUS5 278 aa1.8□□□□□ -2.12
CHD9-215ENST00000565442 RIBC1Q8N443 379 aaPredicted RBP1.8□□□□□ -2.12
CHD9-215ENST00000565442 NATD1Q8N6N6 113 aa1.8□□□□□ -2.12
CHD9-215ENST00000565442 CCDC112Q8NEF3 446 aa1.8□□□□□ -2.12
CHD9-215ENST00000565442 OR52E4Q8NGH9 312 aa1.8□□□□□ -2.12
CHD9-215ENST00000565442 OR5L1Q8NGL2 311 aa1.8□□□□□ -2.12
CHD9-215ENST00000565442 OR51H1Q8NH63 302 aa1.8□□□□□ -2.12
CHD9-215ENST00000565442 PPCDCQ96CD2 204 aa1.8□□□□□ -2.12
CHD9-215ENST00000565442 UBQLN4Q9NRR5 601 aa1.8□□□□□ -2.12
CHD9-215ENST00000565442 CUX1P39880 1505 aa1.8□□□□□ -2.12
CHD9-215ENST00000565442 HMGXB3Q12766 1538 aa1.8□□□□□ -2.12
CHD9-215ENST00000565442 BIVM-ERCC5R4GMW8 1640 aa1.8□□□□□ -2.12
CHD9-215ENST00000565442 LRRIQ1Q96JM4 1722 aa1.8□□□□□ -2.12
CHD9-215ENST00000565442 BAHCC1Q9P281 2608 aa1.79□□□□□ -2.12
CHD9-215ENST00000565442 CALUO43852 315 aaPredicted RBP1.79□□□□□ -2.12
CHD9-215ENST00000565442 CFL1P23528 166 aaKnown RBP1.79□□□□□ -2.12
CHD9-215ENST00000565442 PSMB6P28072 239 aa1.79□□□□□ -2.12
CHD9-215ENST00000565442 HSPA9P38646 679 aaKnown RBP1.79□□□□□ -2.12
CHD9-215ENST00000565442 GABRA4P48169 554 aa1.79□□□□□ -2.12
CHD9-215ENST00000565442 CLEC6AQ6EIG7 209 aa1.79□□□□□ -2.12
CHD9-215ENST00000565442 ATP5L2Q7Z4Y8 100 aa1.79□□□□□ -2.12
CHD9-215ENST00000565442 PLCZ1Q86YW0 608 aa1.79□□□□□ -2.12
CHD9-215ENST00000565442 FUNDC1Q8IVP5 155 aa1.79□□□□□ -2.12
CHD9-215ENST00000565442 Q8NDZ9 215 aa1.79□□□□□ -2.12
CHD9-215ENST00000565442 C7orf50Q9BRJ6 194 aaKnown RBP1.79□□□□□ -2.12
CHD9-215ENST00000565442 CDCA4Q9BXL8 241 aa1.79□□□□□ -2.12
CHD9-215ENST00000565442 UPF3BQ9BZI7 483 aaKnown RBP1.79□□□□□ -2.12
CHD9-215ENST00000565442 TMEM106BQ9NUM4 274 aa1.79□□□□□ -2.12
CHD9-215ENST00000565442 SNX12Q9UMY4 172 aa1.79□□□□□ -2.12
CHD9-215ENST00000565442 EIF4G3O43432 1585 aaKnown RBP1.79□□□□□ -2.12
CHD9-215ENST00000565442 URB2Q14146 1524 aaKnown RBP1.78□□□□□ -2.12
CHD9-215ENST00000565442 IGHV3-73A0A0B4J1V6 119 aa1.78□□□□□ -2.12
CHD9-215ENST00000565442 FNDC10F2Z333 226 aa1.78□□□□□ -2.12
CHD9-215ENST00000565442 GOLGA8RI6L899 631 aa1.78□□□□□ -2.12
CHD9-215ENST00000565442 CCRL2O00421 344 aa1.78□□□□□ -2.12
CHD9-215ENST00000565442 OVOL1O14753 267 aa1.78□□□□□ -2.12
CHD9-215ENST00000565442 ZW10O43264 779 aa1.78□□□□□ -2.12
CHD9-215ENST00000565442 CD99P14209 185 aa1.78□□□□□ -2.12
CHD9-215ENST00000565442 CD200P41217 278 aa1.78□□□□□ -2.12
CHD9-215ENST00000565442 DAPP51397 102 aa1.78□□□□□ -2.12
CHD9-215ENST00000565442 TSPEAR-AS2P59090 65 aa1.78□□□□□ -2.12
CHD9-215ENST00000565442 KRTAP12-1P59990 96 aa1.78□□□□□ -2.12
CHD9-215ENST00000565442 FGF12P61328 243 aa1.78□□□□□ -2.12
CHD9-215ENST00000565442 DAD1P61803 113 aa1.78□□□□□ -2.12
CHD9-215ENST00000565442 SKP1P63208 163 aa1.78□□□□□ -2.12
CHD9-215ENST00000565442 HES1Q14469 280 aa1.78□□□□□ -2.12
CHD9-215ENST00000565442 TBC1D28Q2M2D7 210 aa1.78□□□□□ -2.12
CHD9-215ENST00000565442 HLA-DRB5Q30154 266 aa1.78□□□□□ -2.12
CHD9-215ENST00000565442 ZNF767PQ75MW2 155 aa1.78□□□□□ -2.12
CHD9-215ENST00000565442 C16orf78Q8WTQ4 265 aa1.78□□□□□ -2.12
CHD9-215ENST00000565442 ZNF514Q96K75 400 aaPredicted RBP1.78□□□□□ -2.12
CHD9-215ENST00000565442 DCUN1D5Q9BTE7 237 aa1.78□□□□□ -2.12
CHD9-215ENST00000565442 MROQ9BYG7 248 aa1.78□□□□□ -2.12
CHD9-215ENST00000565442 EIF5A2Q9GZV4 153 aaKnown RBP1.78□□□□□ -2.12
CHD9-215ENST00000565442 C11orf1Q9H5F2 150 aa1.78□□□□□ -2.12
CHD9-215ENST00000565442 WDR54Q9H977 334 aa1.78□□□□□ -2.12
CHD9-215ENST00000565442 FAM206AQ9NX38 181 aa1.78□□□□□ -2.12
CHD9-215ENST00000565442 DSCAML1Q8TD84 2053 aa1.78□□□□□ -2.13
CHD9-215ENST00000565442 DHRS12A0PJE2 317 aa1.77□□□□□ -2.13
CHD9-215ENST00000565442 FABP12A6NFH5 140 aa1.77□□□□□ -2.13
CHD9-215ENST00000565442 GOLGA6L10A6NI86 522 aa1.77□□□□□ -2.13
CHD9-215ENST00000565442 KNCNA6PVL3 124 aa1.77□□□□□ -2.13
CHD9-215ENST00000565442 MRASO14807 208 aa1.77□□□□□ -2.13
CHD9-215ENST00000565442 AZIN1O14977 448 aa1.77□□□□□ -2.13
CHD9-215ENST00000565442 IGLV3-27P01718 113 aa1.77□□□□□ -2.13
CHD9-215ENST00000565442 ATP6V0CP27449 155 aa1.77□□□□□ -2.13
CHD9-215ENST00000565442 OPRM1P35372 400 aa1.77□□□□□ -2.13
CHD9-215ENST00000565442 CRATP43155 626 aa1.77□□□□□ -2.13
CHD9-215ENST00000565442 CD151P48509 253 aa1.77□□□□□ -2.13
CHD9-215ENST00000565442 ZNF140P52738 457 aaPredicted RBP1.77□□□□□ -2.13
CHD9-215ENST00000565442 UBE2G2P60604 165 aa1.77□□□□□ -2.13
CHD9-215ENST00000565442 HERVK_113P63121 156 aa1.77□□□□□ -2.13
CHD9-215ENST00000565442 TMEM267Q0VDI3 215 aaPredicted RBP1.77□□□□□ -2.13
CHD9-215ENST00000565442 SS18Q15532 418 aa1.77□□□□□ -2.13
CHD9-215ENST00000565442 TMEM31Q5JXX7 168 aa1.77□□□□□ -2.13
CHD9-215ENST00000565442 CYGBQ8WWM9 190 aa1.77□□□□□ -2.13
CHD9-215ENST00000565442 OR7D2Q96RA2 312 aa1.77□□□□□ -2.13
CHD9-215ENST00000565442 TBX5Q99593 518 aa1.77□□□□□ -2.13
CHD9-215ENST00000565442 KLF6Q99612 283 aaPredicted RBP1.77□□□□□ -2.13
CHD9-215ENST00000565442 MND1Q9BWT6 205 aa1.77□□□□□ -2.13
CHD9-215ENST00000565442 GNB1LQ9BYB4 327 aa1.77□□□□□ -2.13
CHD9-215ENST00000565442 TTTY12Q9BZ98 90 aa1.77□□□□□ -2.13
CHD9-215ENST00000565442 PARVAQ9NVD7 372 aa1.77□□□□□ -2.13
CHD9-215ENST00000565442 TXNL4BQ9NX01 149 aaKnown RBP1.77□□□□□ -2.13
CHD9-215ENST00000565442 EURLQ9NYK6 297 aa1.77□□□□□ -2.13
CHD9-215ENST00000565442 PSORS1C2Q9UIG4 136 aa1.77□□□□□ -2.13
CHD9-215ENST00000565442 CTTNBP2Q8WZ74 1663 aa1.77□□□□□ -2.13
CHD9-215ENST00000565442 TARBP1Q13395 1621 aaKnown RBP1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms