RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 COL7A1Q02388 2944 aa9.51□□□□□ -0.89
GTF3C1-204ENST00000564664 SAA2-SAA4A0A096LPE2 208 aa9.5□□□□□ -0.89
GTF3C1-204ENST00000564664 IGHV7-81A0A0B4J1V7 117 aa9.5□□□□□ -0.89
GTF3C1-204ENST00000564664 TRAV41A0A0B4J266 112 aa9.5□□□□□ -0.89
GTF3C1-204ENST00000564664 SEC14L6B5MCN3 397 aa9.5□□□□□ -0.89
GTF3C1-204ENST00000564664 I3L521 148 aa9.5□□□□□ -0.89
GTF3C1-204ENST00000564664 ARL6IP5O75915 188 aa9.5□□□□□ -0.89
GTF3C1-204ENST00000564664 SAA2P0DJI9 122 aaPredicted RBP9.5□□□□□ -0.89
GTF3C1-204ENST00000564664 SLC2A2P11168 524 aaPredicted RBP9.5□□□□□ -0.89
GTF3C1-204ENST00000564664 OR3A3P47888 321 aa9.5□□□□□ -0.89
GTF3C1-204ENST00000564664 RAB9AP51151 201 aa9.5□□□□□ -0.89
GTF3C1-204ENST00000564664 CRIP2P52943 208 aaPredicted RBP9.5□□□□□ -0.89
GTF3C1-204ENST00000564664 TMEM267Q0VDI3 215 aaPredicted RBP9.5□□□□□ -0.89
GTF3C1-204ENST00000564664 TPBGQ13641 420 aa9.5□□□□□ -0.89
GTF3C1-204ENST00000564664 INSL4Q14641 139 aa9.5□□□□□ -0.89
GTF3C1-204ENST00000564664 IRF3Q14653 427 aa9.5□□□□□ -0.89
GTF3C1-204ENST00000564664 MED22Q15528 200 aa9.5□□□□□ -0.89
GTF3C1-204ENST00000564664 OR10K2Q6IF99 312 aa9.5□□□□□ -0.89
GTF3C1-204ENST00000564664 SVOPQ8N4V2 548 aa9.5□□□□□ -0.89
GTF3C1-204ENST00000564664 OR1N2Q8NGR9 330 aa9.5□□□□□ -0.89
GTF3C1-204ENST00000564664 IL1F10Q8WWZ1 152 aa9.5□□□□□ -0.89
GTF3C1-204ENST00000564664 PTX4Q96A99 478 aa9.5□□□□□ -0.89
GTF3C1-204ENST00000564664 RITA1Q96K30 269 aa9.5□□□□□ -0.89
GTF3C1-204ENST00000564664 WWC2-AS2Q96NR7 200 aa9.5□□□□□ -0.89
GTF3C1-204ENST00000564664 IFI27L2Q9H2X8 130 aa9.5□□□□□ -0.89
GTF3C1-204ENST00000564664 SCOCQ9UIL1 159 aa9.5□□□□□ -0.89
GTF3C1-204ENST00000564664 RNF150Q9ULK6 438 aa9.5□□□□□ -0.89
GTF3C1-204ENST00000564664 SLC17A2O00624 439 aa9.49□□□□□ -0.89
GTF3C1-204ENST00000564664 ARPC1BO15143 372 aaKnown RBP9.49□□□□□ -0.89
GTF3C1-204ENST00000564664 ATP6V0E1O15342 81 aa9.49□□□□□ -0.89
GTF3C1-204ENST00000564664 ARSBP15848 533 aa9.49□□□□□ -0.89
GTF3C1-204ENST00000564664 MYF6P23409 242 aa9.49□□□□□ -0.89
GTF3C1-204ENST00000564664 ZBTB25P24278 435 aa9.49□□□□□ -0.89
GTF3C1-204ENST00000564664 ZNF616Q08AN1 781 aa9.49□□□□□ -0.89
GTF3C1-204ENST00000564664 UNC119Q13432 240 aa9.49□□□□□ -0.89
GTF3C1-204ENST00000564664 DEFB136Q30KP8 78 aa9.49□□□□□ -0.89
GTF3C1-204ENST00000564664 FAM27D1Q5T7N8 215 aa9.49□□□□□ -0.89
GTF3C1-204ENST00000564664 PYHIN1Q6K0P9 492 aa9.49□□□□□ -0.89
GTF3C1-204ENST00000564664 ZNF429Q86V71 674 aa9.49□□□□□ -0.89
GTF3C1-204ENST00000564664 OR5AN1Q8NGI8 311 aa9.49□□□□□ -0.89
GTF3C1-204ENST00000564664 AGMATQ9BSE5 352 aa9.49□□□□□ -0.89
GTF3C1-204ENST00000564664 LPAR5Q9H1C0 372 aa9.49□□□□□ -0.89
GTF3C1-204ENST00000564664 DUSP21Q9H596 190 aa9.49□□□□□ -0.89
GTF3C1-204ENST00000564664 LSM4Q9Y4Z0 139 aaKnown RBP9.49□□□□□ -0.89
GTF3C1-204ENST00000564664 WSB1Q9Y6I7 421 aa9.49□□□□□ -0.89
GTF3C1-204ENST00000564664 TENM3Q9P273 2699 aa9.49□□□□□ -0.89
GTF3C1-204ENST00000564664 G3V318 75 aa9.48□□□□□ -0.89
GTF3C1-204ENST00000564664 RRHO14718 337 aa9.48□□□□□ -0.89
GTF3C1-204ENST00000564664 GSTP1P09211 210 aaKnown RBP9.48□□□□□ -0.89
GTF3C1-204ENST00000564664 CT45A6P0DMU7 189 aa9.48□□□□□ -0.89
GTF3C1-204ENST00000564664 CT45A5P0DMU8 189 aa9.48□□□□□ -0.89
GTF3C1-204ENST00000564664 CT45A7P0DMV0 189 aa9.48□□□□□ -0.89
GTF3C1-204ENST00000564664 CEACAM6P40199 344 aa9.48□□□□□ -0.89
GTF3C1-204ENST00000564664 ECI1P42126 302 aa9.48□□□□□ -0.89
GTF3C1-204ENST00000564664 ZNF260Q3ZCT1 412 aa9.48□□□□□ -0.89
GTF3C1-204ENST00000564664 LIPKQ5VXJ0 399 aa9.48□□□□□ -0.89
GTF3C1-204ENST00000564664 CD200R1LQ6Q8B3 271 aa9.48□□□□□ -0.89
GTF3C1-204ENST00000564664 ZNF562Q6V9R5 426 aa9.48□□□□□ -0.89
GTF3C1-204ENST00000564664 SETD6Q8TBK2 473 aa9.48□□□□□ -0.89
GTF3C1-204ENST00000564664 NICN1Q9BSH3 213 aa9.48□□□□□ -0.89
GTF3C1-204ENST00000564664 CENPOQ9BU64 300 aa9.48□□□□□ -0.89
GTF3C1-204ENST00000564664 KLK15Q9H2R5 256 aa9.48□□□□□ -0.89
GTF3C1-204ENST00000564664 PLGRKTQ9HBL7 147 aa9.48□□□□□ -0.89
GTF3C1-204ENST00000564664 PARP11Q9NR21 331 aa9.48□□□□□ -0.89
GTF3C1-204ENST00000564664 WASHC3Q9Y3C0 194 aa9.48□□□□□ -0.89
GTF3C1-204ENST00000564664 NUBP2Q9Y5Y2 271 aa9.48□□□□□ -0.89
GTF3C1-204ENST00000564664 SORL1Q92673 2214 aa9.48□□□□□ -0.89
GTF3C1-204ENST00000564664 H0YJW9 148 aa9.47□□□□□ -0.89
GTF3C1-204ENST00000564664 ST8SIA5O15466 376 aa9.47□□□□□ -0.89
GTF3C1-204ENST00000564664 SOCS1O15524 211 aa9.47□□□□□ -0.89
GTF3C1-204ENST00000564664 HSPA12AO43301 675 aa9.47□□□□□ -0.89
GTF3C1-204ENST00000564664 CPEP16870 476 aa9.47□□□□□ -0.89
GTF3C1-204ENST00000564664 CNTFRP26992 372 aa9.47□□□□□ -0.89
GTF3C1-204ENST00000564664 CD40LGP29965 261 aa9.47□□□□□ -0.89
GTF3C1-204ENST00000564664 SERPINB10P48595 397 aa9.47□□□□□ -0.89
GTF3C1-204ENST00000564664 LUMP51884 338 aaPredicted RBP9.47□□□□□ -0.89
GTF3C1-204ENST00000564664 CX3CL1P78423 397 aa9.47□□□□□ -0.89
GTF3C1-204ENST00000564664 MLLT11Q13015 90 aaPredicted RBP9.47□□□□□ -0.89
GTF3C1-204ENST00000564664 RAB11BQ15907 218 aa9.47□□□□□ -0.89
GTF3C1-204ENST00000564664 AKIRIN2Q53H80 203 aa9.47□□□□□ -0.89
GTF3C1-204ENST00000564664 C19orf54Q5BKX5 351 aa9.47□□□□□ -0.89
GTF3C1-204ENST00000564664 C11orf87Q6NUJ2 197 aa9.47□□□□□ -0.89
GTF3C1-204ENST00000564664 FAM131AQ6UXB0 335 aa9.47□□□□□ -0.89
GTF3C1-204ENST00000564664 TMEM91Q6ZNR0 172 aa9.47□□□□□ -0.89
GTF3C1-204ENST00000564664 C5orf24Q7Z6I8 188 aa9.47□□□□□ -0.89
GTF3C1-204ENST00000564664 OR56B1Q8NGI3 324 aa9.47□□□□□ -0.89
GTF3C1-204ENST00000564664 TMEM203Q969S6 136 aa9.47□□□□□ -0.89
GTF3C1-204ENST00000564664 C11orf54Q9H0W9 315 aaPredicted RBP9.47□□□□□ -0.89
GTF3C1-204ENST00000564664 Q9N2K0 584 aa9.47□□□□□ -0.89
GTF3C1-204ENST00000564664 ACOT13Q9NPJ3 140 aa9.47□□□□□ -0.89
GTF3C1-204ENST00000564664 C12orf4Q9NQ89 552 aa9.47□□□□□ -0.89
GTF3C1-204ENST00000564664 AK3Q9UIJ7 227 aa9.47□□□□□ -0.89
GTF3C1-204ENST00000564664 GAB2Q9UQC2 676 aa9.47□□□□□ -0.89
GTF3C1-204ENST00000564664 FOXA2Q9Y261 457 aaPredicted RBP9.47□□□□□ -0.89
GTF3C1-204ENST00000564664 A0A0A6YYD4 124 aa9.46□□□□□ -0.9
GTF3C1-204ENST00000564664 FOXI3A8MTJ6 420 aaPredicted RBP9.46□□□□□ -0.9
GTF3C1-204ENST00000564664 H7C2Y5 167 aa9.46□□□□□ -0.9
GTF3C1-204ENST00000564664 RGS10O43665 173 aa9.46□□□□□ -0.9
GTF3C1-204ENST00000564664 SPDEFO95238 335 aa9.46□□□□□ -0.9
GTF3C1-204ENST00000564664 DIRAS3O95661 229 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms