RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 MMP26Q9NRE1 261 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 KCNS2Q9ULS6 477 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 POLR3KQ9Y2Y1 108 aaPredicted RBP8.32□□□□□ -1.08
SMG1-208ENST00000563448 SESN1Q9Y6P5 492 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 CSMD2Q7Z408 3487 aa8.31□□□□□ -1.08
SMG1-208ENST00000563448 PRRC2AP48634 2157 aaKnown RBP8.31□□□□□ -1.08
SMG1-208ENST00000563448 IGHV2-70DA0A0C4DH43 119 aa8.31□□□□□ -1.08
SMG1-208ENST00000563448 MPPED1O15442 326 aa8.31□□□□□ -1.08
SMG1-208ENST00000563448 ENSAO43768 121 aaKnown RBP8.31□□□□□ -1.08
SMG1-208ENST00000563448 CREBL2O60519 120 aaPredicted RBP8.31□□□□□ -1.08
SMG1-208ENST00000563448 FOXH1O75593 365 aa8.31□□□□□ -1.08
SMG1-208ENST00000563448 PGLYRP1O75594 196 aaPredicted RBP8.31□□□□□ -1.08
SMG1-208ENST00000563448 S100A1P23297 94 aa8.31□□□□□ -1.08
SMG1-208ENST00000563448 VAMP1P23763 118 aa8.31□□□□□ -1.08
SMG1-208ENST00000563448 RRAS2P62070 204 aaPredicted RBP8.31□□□□□ -1.08
SMG1-208ENST00000563448 EIF4EBP1Q13541 118 aaPredicted RBP8.31□□□□□ -1.08
SMG1-208ENST00000563448 SLC9A3R2Q15599 337 aa8.31□□□□□ -1.08
SMG1-208ENST00000563448 C1orf229Q6ZS94 237 aaPredicted RBP8.31□□□□□ -1.08
SMG1-208ENST00000563448 SLC25A48Q6ZT89 311 aaKnown RBP8.31□□□□□ -1.08
SMG1-208ENST00000563448 TBC1D26Q86UD7 250 aa8.31□□□□□ -1.08
SMG1-208ENST00000563448 ODF3L1Q8IXM7 274 aa8.31□□□□□ -1.08
SMG1-208ENST00000563448 CCDC71LQ8N9Z2 235 aa8.31□□□□□ -1.08
SMG1-208ENST00000563448 FAM216AQ8WUB2 273 aa8.31□□□□□ -1.08
SMG1-208ENST00000563448 DMRTB1Q96MA1 342 aa8.31□□□□□ -1.08
SMG1-208ENST00000563448 TMEM133Q9H2Q1 129 aa8.31□□□□□ -1.08
SMG1-208ENST00000563448 NAA60Q9H7X0 242 aa8.31□□□□□ -1.08
SMG1-208ENST00000563448 SDHAF2Q9NX18 166 aa8.31□□□□□ -1.08
SMG1-208ENST00000563448 PRR13Q9NZ81 148 aa8.31□□□□□ -1.08
SMG1-208ENST00000563448 ZNRD1Q9P1U0 126 aa8.31□□□□□ -1.08
SMG1-208ENST00000563448 TEX13DA0A0J9YY54 714 aaPredicted RBP8.3□□□□□ -1.08
SMG1-208ENST00000563448 HMX3A6NHT5 357 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 M0R1W7 72 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 PROP1O75360 226 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 USF1P22415 310 aaPredicted RBP8.3□□□□□ -1.08
SMG1-208ENST00000563448 RAB7AP51149 207 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 PRB3Q04118 309 aaPredicted RBP8.3□□□□□ -1.08
SMG1-208ENST00000563448 NDUFA5Q16718 116 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 Q3ZCU0 254 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 SGPP2Q8IWX5 399 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 CMTM1Q8IZ96 169 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 ZNF596Q8TC21 504 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 CASTOR1Q8WTX7 329 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 J3QR06 171 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 SSNA1O43805 119 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 SLC22A5O76082 557 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 CD34P28906 385 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 GPR12P47775 334 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 FCN2Q15485 313 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 MSMO1Q15800 293 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 ANKRD55Q3KP44 614 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 LIN54Q6MZP7 749 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 PRSS57Q6UWY2 283 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 BTNL3Q6UXE8 466 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 C12orf45Q8N5I9 185 aaPredicted RBP8.3□□□□□ -1.08
SMG1-208ENST00000563448 LINC00311Q8N616 119 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 KIR3DL3Q8N743 410 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 C8orf31Q8N9H6 132 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 ZBTB34Q8NCN2 500 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 MITD1Q8WV92 249 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 GALNT14Q96FL9 552 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 MED28Q9H204 178 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 LPAR2Q9HBW0 351 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 GAB2Q9UQC2 676 aa8.3□□□□□ -1.08
SMG1-208ENST00000563448 IGHV2-26A0A0B4J1V2 119 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 C3orf85A0A1B0GTC6 90 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 hCG_1809904A0A1W2PP81 198 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 A0A1W2PPE2 198 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 A0A1W2PR64 198 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 A0A1W2PRV1 198 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 DUS4LO95620 317 aaKnown RBP8.29□□□□□ -1.08
SMG1-208ENST00000563448 IFNA2P01563 188 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 OR5AC1P0C628 307 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 TMEM187Q14656 261 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 C2orf68Q2NKX9 166 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 SP6Q3SY56 376 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 RPL39P5Q59GN2 51 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 C1orf122Q6ZSJ8 110 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 LYG1Q8N1E2 194 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 ABHD12Q8N2K0 398 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 OR9G1Q8NH87 305 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 TP53RKQ96S44 253 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 SIRPDQ9H106 197 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 SIRT7Q9NRC8 400 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 KPTNQ9Y664 436 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 PDZD2O15018 2839 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 SAA2-SAA4A0A096LPE2 208 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 BOLA2-SMG1P6H3BVE0 249 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 SAA2P0DJI9 122 aaPredicted RBP8.29□□□□□ -1.08
SMG1-208ENST00000563448 SULT1A3P0DMM9 295 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 SULT1A4P0DMN0 295 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 CXCL3P19876 107 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 PRTN3P24158 256 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 F2RP25116 425 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 DVL1P1P54792 670 aaPredicted RBP8.29□□□□□ -1.08
SMG1-208ENST00000563448 RPL30P62888 115 aaKnown RBP8.29□□□□□ -1.08
SMG1-208ENST00000563448 HCP5Q6MZN7 132 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 KCTD9Q7L273 389 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 UXS1Q8NBZ7 420 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 OR11H7Q8NGC8 314 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 GLYATL2Q8WU03 294 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms