RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 CCBE1Q6UXH8 406 aaPredicted RBP12.58□□□□□ -0.4
USB1-208ENST00000563207 HOGA1Q86XE5 327 aa12.58□□□□□ -0.4
USB1-208ENST00000563207 LAX1Q8IWV1 398 aa12.58□□□□□ -0.4
USB1-208ENST00000563207 LYG1Q8N1E2 194 aa12.58□□□□□ -0.4
USB1-208ENST00000563207 ZNF439Q8NDP4 499 aa12.58□□□□□ -0.4
USB1-208ENST00000563207 OR2AK2Q8NG84 335 aa12.58□□□□□ -0.4
USB1-208ENST00000563207 OR52L2PQ8NGH6 319 aa12.58□□□□□ -0.4
USB1-208ENST00000563207 OR10J5Q8NHC4 309 aa12.58□□□□□ -0.4
USB1-208ENST00000563207 LEAP2Q969E1 77 aa12.58□□□□□ -0.4
USB1-208ENST00000563207 SLC23A1Q9UHI7 598 aa12.58□□□□□ -0.4
USB1-208ENST00000563207 MRPS7Q9Y2R9 242 aaKnown RBP12.58□□□□□ -0.4
USB1-208ENST00000563207 TRBV6-7A0A0A0MS04 114 aa12.57□□□□□ -0.4
USB1-208ENST00000563207 LY6LH3BQJ8 138 aa12.57□□□□□ -0.4
USB1-208ENST00000563207 LPLP06858 475 aa12.57□□□□□ -0.4
USB1-208ENST00000563207 GSTT2P0CG29 244 aa12.57□□□□□ -0.4
USB1-208ENST00000563207 GSTT2BP0CG30 244 aa12.57□□□□□ -0.4
USB1-208ENST00000563207 CEACAM6P40199 344 aa12.57□□□□□ -0.4
USB1-208ENST00000563207 GNG10P50151 68 aa12.57□□□□□ -0.4
USB1-208ENST00000563207 RAB7AP51149 207 aa12.57□□□□□ -0.4
USB1-208ENST00000563207 DYNLT3P51808 116 aa12.57□□□□□ -0.4
USB1-208ENST00000563207 ZNF137PP52743 207 aa12.57□□□□□ -0.4
USB1-208ENST00000563207 SSX2Q16385 188 aa12.57□□□□□ -0.4
USB1-208ENST00000563207 BEST4Q8NFU0 473 aa12.57□□□□□ -0.4
USB1-208ENST00000563207 OR10V1Q8NGI7 309 aa12.57□□□□□ -0.4
USB1-208ENST00000563207 DIRAS2Q96HU8 199 aa12.57□□□□□ -0.4
USB1-208ENST00000563207 ABHD14AQ9BUJ0 271 aa12.57□□□□□ -0.4
USB1-208ENST00000563207 IFT46Q9NQC8 304 aa12.57□□□□□ -0.4
USB1-208ENST00000563207 ANXA10Q9UJ72 324 aa12.57□□□□□ -0.4
USB1-208ENST00000563207 A6NHS1 94 aa12.56□□□□□ -0.4
USB1-208ENST00000563207 TXNL1O43396 289 aa12.56□□□□□ -0.4
USB1-208ENST00000563207 IGHV3-7P01780 117 aa12.56□□□□□ -0.4
USB1-208ENST00000563207 S100A5P33763 92 aa12.56□□□□□ -0.4
USB1-208ENST00000563207 PPP1CCP36873 323 aaKnown RBP12.56□□□□□ -0.4
USB1-208ENST00000563207 ZNF134P52741 427 aa12.56□□□□□ -0.4
USB1-208ENST00000563207 MRPS10P82664 201 aaKnown RBP12.56□□□□□ -0.4
USB1-208ENST00000563207 GNMTQ14749 295 aa12.56□□□□□ -0.4
USB1-208ENST00000563207 HERPUD1Q15011 391 aa12.56□□□□□ -0.4
USB1-208ENST00000563207 CT45A1Q5HYN5 189 aa12.56□□□□□ -0.4
USB1-208ENST00000563207 UTF1Q5T230 341 aa12.56□□□□□ -0.4
USB1-208ENST00000563207 TPTE2P1Q5T6R2 138 aa12.56□□□□□ -0.4
USB1-208ENST00000563207 Q6ZS46 218 aa12.56□□□□□ -0.4
USB1-208ENST00000563207 TMEM219Q86XT9 240 aa12.56□□□□□ -0.4
USB1-208ENST00000563207 DTX3Q8N9I9 347 aa12.56□□□□□ -0.4
USB1-208ENST00000563207 CT45A3Q8NHU0 189 aa12.56□□□□□ -0.4
USB1-208ENST00000563207 GPX8Q8TED1 209 aa12.56□□□□□ -0.4
USB1-208ENST00000563207 RPEQ96AT9 228 aa12.56□□□□□ -0.4
USB1-208ENST00000563207 ANAPC10Q9UM13 185 aa12.56□□□□□ -0.4
USB1-208ENST00000563207 IGKV1-6A0A0C4DH72 117 aa12.55□□□□□ -0.4
USB1-208ENST00000563207 BET1O15155 118 aa12.55□□□□□ -0.4
USB1-208ENST00000563207 GAPDHP04406 335 aaKnown RBP12.55□□□□□ -0.4
USB1-208ENST00000563207 VSIG10L2P0DP72 767 aa12.55□□□□□ -0.4
USB1-208ENST00000563207 NAT1P18440 290 aa12.55□□□□□ -0.4
USB1-208ENST00000563207 BRS3P32247 399 aa12.55□□□□□ -0.4
USB1-208ENST00000563207 ZNF816Q0VGE8 651 aaPredicted RBP12.55□□□□□ -0.4
USB1-208ENST00000563207 IGSF11Q5DX21 431 aa12.55□□□□□ -0.4
USB1-208ENST00000563207 FOXB2Q5VYV0 432 aa12.55□□□□□ -0.4
USB1-208ENST00000563207 PYHIN1Q6K0P9 492 aa12.55□□□□□ -0.4
USB1-208ENST00000563207 C5orf24Q7Z6I8 188 aa12.55□□□□□ -0.4
USB1-208ENST00000563207 OR8H3Q8N146 312 aa12.55□□□□□ -0.4
USB1-208ENST00000563207 KLHDC1Q8N7A1 406 aa12.55□□□□□ -0.4
USB1-208ENST00000563207 MAFIPQ8WZ33 124 aa12.55□□□□□ -0.4
USB1-208ENST00000563207 GINS4Q9BRT9 223 aa12.55□□□□□ -0.4
USB1-208ENST00000563207 ABCB10Q9NRK6 738 aa12.55□□□□□ -0.4
USB1-208ENST00000563207 PIPOXQ9P0Z9 390 aa12.55□□□□□ -0.4
USB1-208ENST00000563207 HILPDAQ9Y5L2 63 aa12.55□□□□□ -0.4
USB1-208ENST00000563207 IGKV1D-8A0A087WSZ0 117 aa12.54□□□□□ -0.4
USB1-208ENST00000563207 A0A1W2PPE3 182 aa12.54□□□□□ -0.4
USB1-208ENST00000563207 G3V4G9 280 aa12.54□□□□□ -0.4
USB1-208ENST00000563207 CTDSPLO15194 276 aa12.54□□□□□ -0.4
USB1-208ENST00000563207 CSF1P09603 554 aa12.54□□□□□ -0.4
USB1-208ENST00000563207 PTHLHP12272 177 aa12.54□□□□□ -0.4
USB1-208ENST00000563207 TNFSF8P32971 234 aa12.54□□□□□ -0.4
USB1-208ENST00000563207 ARPC4P59998 168 aa12.54□□□□□ -0.4
USB1-208ENST00000563207 SSBP1Q04837 148 aaKnown RBP12.54□□□□□ -0.4
USB1-208ENST00000563207 FAM71F2Q6NXP2 309 aa12.54□□□□□ -0.4
USB1-208ENST00000563207 SNX29P2Q8IUI4 249 aa12.54□□□□□ -0.4
USB1-208ENST00000563207 GVQW1Q8N7I0 195 aa12.54□□□□□ -0.4
USB1-208ENST00000563207 OR5AP2Q8NGF4 316 aa12.54□□□□□ -0.4
USB1-208ENST00000563207 TOMM40LQ969M1 308 aa12.54□□□□□ -0.4
USB1-208ENST00000563207 ST6GALNAC6Q969X2 333 aa12.54□□□□□ -0.4
USB1-208ENST00000563207 ZNF702PQ9H963 129 aa12.54□□□□□ -0.4
USB1-208ENST00000563207 SERTAD4Q9NUC0 356 aa12.54□□□□□ -0.4
USB1-208ENST00000563207 RDH8Q9NYR8 311 aa12.54□□□□□ -0.4
USB1-208ENST00000563207 OR1A1Q9P1Q5 309 aa12.54□□□□□ -0.4
USB1-208ENST00000563207 PITPNC1Q9UKF7 332 aa12.54□□□□□ -0.4
USB1-208ENST00000563207 RAB29O14966 203 aa12.53□□□□□ -0.4
USB1-208ENST00000563207 SLC31A2O15432 143 aa12.53□□□□□ -0.4
USB1-208ENST00000563207 PRB2P02812 416 aaPredicted RBP12.53□□□□□ -0.4
USB1-208ENST00000563207 PTBP1P26599 531 aaKnown RBP eCLIP12.53□□□□□ -0.4
USB1-208ENST00000563207 TAS2R46P59540 309 aa12.53□□□□□ -0.4
USB1-208ENST00000563207 C2orf68Q2NKX9 166 aa12.53□□□□□ -0.4
USB1-208ENST00000563207 FBLN7Q53RD9 439 aa12.53□□□□□ -0.4
USB1-208ENST00000563207 FAM53AQ6NSI3 398 aaPredicted RBP12.53□□□□□ -0.4
USB1-208ENST00000563207 LIAT1Q6ZQX7 453 aa12.53□□□□□ -0.4
USB1-208ENST00000563207 OR4C13Q8NGP0 309 aa12.53□□□□□ -0.4
USB1-208ENST00000563207 FCAMRQ8WWV6 532 aa12.53□□□□□ -0.4
USB1-208ENST00000563207 CFHR4Q92496 578 aa12.53□□□□□ -0.4
USB1-208ENST00000563207 ABHD1Q96SE0 405 aa12.53□□□□□ -0.4
USB1-208ENST00000563207 S1PR3Q99500 378 aa12.53□□□□□ -0.4
USB1-208ENST00000563207 AGMATQ9BSE5 352 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms