RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 SSBP3Q9BWW4 388 aaPredicted RBP11.76□□□□□ -0.53
COMMD4-205ENST00000562310 RANBP3Q9H6Z4 567 aaPredicted RBP11.76□□□□□ -0.53
COMMD4-205ENST00000562310 FAM212BQ9NTI7 297 aaPredicted RBP11.76□□□□□ -0.53
COMMD4-205ENST00000562310 GAB2Q9UQC2 676 aa11.76□□□□□ -0.53
COMMD4-205ENST00000562310 USF3Q68DE3 2245 aa11.75□□□□□ -0.53
COMMD4-205ENST00000562310 SPTAN1Q13813 2472 aaKnown RBP11.75□□□□□ -0.53
COMMD4-205ENST00000562310 hCG_1809904A0A1W2PP81 198 aa11.75□□□□□ -0.53
COMMD4-205ENST00000562310 A0A1W2PPE2 198 aa11.75□□□□□ -0.53
COMMD4-205ENST00000562310 A0A1W2PR64 198 aa11.75□□□□□ -0.53
COMMD4-205ENST00000562310 A0A1W2PRV1 198 aa11.75□□□□□ -0.53
COMMD4-205ENST00000562310 ST8SIA5O15466 376 aa11.75□□□□□ -0.53
COMMD4-205ENST00000562310 CCL3L1P16619 93 aa11.75□□□□□ -0.53
COMMD4-205ENST00000562310 ATP5J2P56134 94 aa11.75□□□□□ -0.53
COMMD4-205ENST00000562310 H2BFSP57053 126 aa11.75□□□□□ -0.53
COMMD4-205ENST00000562310 NOXA1Q86UR1 476 aa11.75□□□□□ -0.53
COMMD4-205ENST00000562310 ZNF439Q8NDP4 499 aa11.75□□□□□ -0.53
COMMD4-205ENST00000562310 OR2T35Q8NGX2 323 aa11.75□□□□□ -0.53
COMMD4-205ENST00000562310 GLYATL2Q8WU03 294 aa11.75□□□□□ -0.53
COMMD4-205ENST00000562310 MSI2Q96DH6 328 aaKnown RBP11.75□□□□□ -0.53
COMMD4-205ENST00000562310 TMEM56Q96MV1 263 aa11.75□□□□□ -0.53
COMMD4-205ENST00000562310 TP53RKQ96S44 253 aa11.75□□□□□ -0.53
COMMD4-205ENST00000562310 AGMATQ9BSE5 352 aa11.75□□□□□ -0.53
COMMD4-205ENST00000562310 PIMREGQ9BSJ6 248 aa11.75□□□□□ -0.53
COMMD4-205ENST00000562310 PDCD10Q9BUL8 212 aa11.75□□□□□ -0.53
COMMD4-205ENST00000562310 CHIAQ9BZP6 476 aa11.75□□□□□ -0.53
COMMD4-205ENST00000562310 IFI27L2Q9H2X8 130 aa11.75□□□□□ -0.53
COMMD4-205ENST00000562310 METTL8Q9H825 291 aaKnown RBP11.75□□□□□ -0.53
COMMD4-205ENST00000562310 PIPOXQ9P0Z9 390 aa11.75□□□□□ -0.53
COMMD4-205ENST00000562310 TMEM56-RWDD3S4R434 201 aa11.75□□□□□ -0.53
COMMD4-205ENST00000562310 YLPM1P49750 1951 aaKnown RBP11.75□□□□□ -0.53
COMMD4-205ENST00000562310 PTPN13Q12923 2485 aa11.75□□□□□ -0.53
COMMD4-205ENST00000562310 A0A087X0M5 115 aa11.74□□□□□ -0.53
COMMD4-205ENST00000562310 PPIAL4CA0A0B4J2A2 164 aa11.74□□□□□ -0.53
COMMD4-205ENST00000562310 A0A1B0GX30 115 aa11.74□□□□□ -0.53
COMMD4-205ENST00000562310 C5orf51A6NDU8 294 aa11.74□□□□□ -0.53
COMMD4-205ENST00000562310 C17orf98A8MV24 154 aa11.74□□□□□ -0.53
COMMD4-205ENST00000562310 TNFSF12O43508 249 aa11.74□□□□□ -0.53
COMMD4-205ENST00000562310 SIX6O95475 246 aa11.74□□□□□ -0.53
COMMD4-205ENST00000562310 IGHV2-5P01817 119 aa11.74□□□□□ -0.53
COMMD4-205ENST00000562310 LIPFP07098 398 aa11.74□□□□□ -0.53
COMMD4-205ENST00000562310 PPIAL4GP0DN37 164 aa11.74□□□□□ -0.53
COMMD4-205ENST00000562310 DSCR9P59020 149 aa11.74□□□□□ -0.53
COMMD4-205ENST00000562310 FGL1Q08830 312 aa11.74□□□□□ -0.53
COMMD4-205ENST00000562310 EIF4EBP1Q13541 118 aaPredicted RBP11.74□□□□□ -0.53
COMMD4-205ENST00000562310 SP6Q3SY56 376 aa11.74□□□□□ -0.53
COMMD4-205ENST00000562310 DCAF12L2Q5VW00 463 aa11.74□□□□□ -0.53
COMMD4-205ENST00000562310 FAM53AQ6NSI3 398 aaPredicted RBP11.74□□□□□ -0.53
COMMD4-205ENST00000562310 CLEC2AQ6UVW9 174 aa11.74□□□□□ -0.53
COMMD4-205ENST00000562310 SLC25A48Q6ZT89 311 aaKnown RBP11.74□□□□□ -0.53
COMMD4-205ENST00000562310 LY6G5BQ8NDX9 201 aa11.74□□□□□ -0.53
COMMD4-205ENST00000562310 OR51H1Q8NH63 302 aa11.74□□□□□ -0.53
COMMD4-205ENST00000562310 FAM168AQ92567 244 aa11.74□□□□□ -0.53
COMMD4-205ENST00000562310 HYLS1Q96M11 299 aa11.74□□□□□ -0.53
COMMD4-205ENST00000562310 GSX2Q9BZM3 304 aa11.74□□□□□ -0.53
COMMD4-205ENST00000562310 RNF150Q9ULK6 438 aa11.74□□□□□ -0.53
COMMD4-205ENST00000562310 TMED3Q9Y3Q3 217 aa11.74□□□□□ -0.53
COMMD4-205ENST00000562310 SESN1Q9Y6P5 492 aa11.74□□□□□ -0.53
COMMD4-205ENST00000562310 A8MXK9 166 aa11.73□□□□□ -0.53
COMMD4-205ENST00000562310 FAM25EA8MYX2 175 aa11.73□□□□□ -0.53
COMMD4-205ENST00000562310 CCSO14618 274 aa11.73□□□□□ -0.53
COMMD4-205ENST00000562310 RAB29O14966 203 aa11.73□□□□□ -0.53
COMMD4-205ENST00000562310 CDS2O95674 445 aa11.73□□□□□ -0.53
COMMD4-205ENST00000562310 SERPINE2P07093 398 aa11.73□□□□□ -0.53
COMMD4-205ENST00000562310 IGHV1-8P0DP01 117 aa11.73□□□□□ -0.53
COMMD4-205ENST00000562310 RPA2P15927 270 aa11.73□□□□□ -0.53
COMMD4-205ENST00000562310 DNASE1P24855 282 aa11.73□□□□□ -0.53
COMMD4-205ENST00000562310 GZMKP49863 264 aa11.73□□□□□ -0.53
COMMD4-205ENST00000562310 CT45A1Q5HYN5 189 aa11.73□□□□□ -0.53
COMMD4-205ENST00000562310 ZNF787Q6DD87 383 aa11.73□□□□□ -0.53
COMMD4-205ENST00000562310 ZNF695Q8IW36 515 aa11.73□□□□□ -0.53
COMMD4-205ENST00000562310 LINC00311Q8N616 119 aa11.73□□□□□ -0.53
COMMD4-205ENST00000562310 KIR3DL3Q8N743 410 aa11.73□□□□□ -0.53
COMMD4-205ENST00000562310 CT45A3Q8NHU0 189 aa11.73□□□□□ -0.53
COMMD4-205ENST00000562310 RBPMSQ93062 196 aaKnown RBP11.73□□□□□ -0.53
COMMD4-205ENST00000562310 ABHD14BQ96IU4 210 aa11.73□□□□□ -0.53
COMMD4-205ENST00000562310 C18orf12Q96KH6 178 aa11.73□□□□□ -0.53
COMMD4-205ENST00000562310 SPIN2AQ99865 258 aa11.73□□□□□ -0.53
COMMD4-205ENST00000562310 SPIN2BQ9BPZ2 258 aa11.73□□□□□ -0.53
COMMD4-205ENST00000562310 NMES1Q9C002 83 aa11.73□□□□□ -0.53
COMMD4-205ENST00000562310 BPESC1Q9GZL8 116 aa11.73□□□□□ -0.53
COMMD4-205ENST00000562310 NARFLQ9H6Q4 476 aa11.73□□□□□ -0.53
COMMD4-205ENST00000562310 SDHAF2Q9NX18 166 aa11.73□□□□□ -0.53
COMMD4-205ENST00000562310 PRR13Q9NZ81 148 aa11.73□□□□□ -0.53
COMMD4-205ENST00000562310 COMMD9Q9P000 198 aa11.73□□□□□ -0.53
COMMD4-205ENST00000562310 LOC105371242A0A075B767 164 aa11.72□□□□□ -0.53
COMMD4-205ENST00000562310 C13orf42A0A1B0GVH6 325 aa11.72□□□□□ -0.53
COMMD4-205ENST00000562310 M0R1W7 72 aa11.72□□□□□ -0.53
COMMD4-205ENST00000562310 ADAP1O75689 374 aa11.72□□□□□ -0.53
COMMD4-205ENST00000562310 MMP23AO75900 390 aa11.72□□□□□ -0.53
COMMD4-205ENST00000562310 SNAPC5O75971 98 aa11.72□□□□□ -0.53
COMMD4-205ENST00000562310 ATG12O94817 140 aa11.72□□□□□ -0.53
COMMD4-205ENST00000562310 HOXB5P09067 269 aa11.72□□□□□ -0.53
COMMD4-205ENST00000562310 KIR2DS2P43631 304 aa11.72□□□□□ -0.53
COMMD4-205ENST00000562310 TMEM268Q5VZI3 342 aa11.72□□□□□ -0.53
COMMD4-205ENST00000562310 GGNBP1Q5YKI7 109 aa11.72□□□□□ -0.53
COMMD4-205ENST00000562310 ZNF596Q8TC21 504 aa11.72□□□□□ -0.53
COMMD4-205ENST00000562310 CD300LFQ8TDQ1 290 aa11.72□□□□□ -0.53
COMMD4-205ENST00000562310 C10orf105Q8TEF2 133 aa11.72□□□□□ -0.53
COMMD4-205ENST00000562310 TNFRSF14Q92956 283 aa11.72□□□□□ -0.53
COMMD4-205ENST00000562310 C5orf30Q96GV9 206 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms