RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 C19orf24Q9BVV8 132 aa11.27□□□□□ -0.61
IFT140-205ENST00000561954 NXF2Q9GZY0 626 aaKnown RBP11.27□□□□□ -0.61
IFT140-205ENST00000561954 MIXL1Q9H2W2 232 aa11.27□□□□□ -0.61
IFT140-205ENST00000561954 MMP27Q9H306 513 aa11.27□□□□□ -0.61
IFT140-205ENST00000561954 NECAP2Q9NVZ3 263 aa11.27□□□□□ -0.61
IFT140-205ENST00000561954 ZNF221Q9UK13 617 aa11.27□□□□□ -0.61
IFT140-205ENST00000561954 ANAPC10Q9UM13 185 aa11.27□□□□□ -0.61
IFT140-205ENST00000561954 KIAA2026Q5HYC2 2103 aa11.27□□□□□ -0.61
IFT140-205ENST00000561954 IGHV1-3A0A0C4DH29 117 aa11.26□□□□□ -0.61
IFT140-205ENST00000561954 FAM181BA6NEQ2 426 aa11.26□□□□□ -0.61
IFT140-205ENST00000561954 HLA-DQB1P01920 261 aa11.26□□□□□ -0.61
IFT140-205ENST00000561954 S100A5P33763 92 aa11.26□□□□□ -0.61
IFT140-205ENST00000561954 GPR12P47775 334 aa11.26□□□□□ -0.61
IFT140-205ENST00000561954 REG1BP48304 166 aa11.26□□□□□ -0.61
IFT140-205ENST00000561954 SRSF2Q01130 221 aaKnown RBP11.26□□□□□ -0.61
IFT140-205ENST00000561954 HABP2Q14520 560 aaPredicted RBP11.26□□□□□ -0.61
IFT140-205ENST00000561954 LY6EQ16553 131 aa11.26□□□□□ -0.61
IFT140-205ENST00000561954 ZNF833PQ6ZTB9 187 aa11.26□□□□□ -0.61
IFT140-205ENST00000561954 C5orf24Q7Z6I8 188 aa11.26□□□□□ -0.61
IFT140-205ENST00000561954 H1FOOQ8IZA3 346 aaPredicted RBP11.26□□□□□ -0.61
IFT140-205ENST00000561954 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.26□□□□□ -0.61
IFT140-205ENST00000561954 OR56B4Q8NH76 319 aa11.26□□□□□ -0.61
IFT140-205ENST00000561954 GPX8Q8TED1 209 aa11.26□□□□□ -0.61
IFT140-205ENST00000561954 GCDHQ92947 438 aaPredicted RBP11.26□□□□□ -0.61
IFT140-205ENST00000561954 DIRAS2Q96HU8 199 aa11.26□□□□□ -0.61
IFT140-205ENST00000561954 NPFFR1Q9GZQ6 430 aa11.26□□□□□ -0.61
IFT140-205ENST00000561954 C11orf54Q9H0W9 315 aaPredicted RBP11.26□□□□□ -0.61
IFT140-205ENST00000561954 RANBP3Q9H6Z4 567 aaPredicted RBP11.26□□□□□ -0.61
IFT140-205ENST00000561954 RBM7Q9Y580 266 aaKnown RBP11.26□□□□□ -0.61
IFT140-205ENST00000561954 IGKV1D-8A0A087WSZ0 117 aa11.25□□□□□ -0.61
IFT140-205ENST00000561954 DPPA5A6NC42 116 aa11.25□□□□□ -0.61
IFT140-205ENST00000561954 MEIS3P1A6NDR6 274 aa11.25□□□□□ -0.61
IFT140-205ENST00000561954 A6NDX4 124 aa11.25□□□□□ -0.61
IFT140-205ENST00000561954 M0QZK8 103 aa11.25□□□□□ -0.61
IFT140-205ENST00000561954 CTDSP2O14595 271 aa11.25□□□□□ -0.61
IFT140-205ENST00000561954 PTHLHP12272 177 aa11.25□□□□□ -0.61
IFT140-205ENST00000561954 CDK10Q15131 360 aa11.25□□□□□ -0.61
IFT140-205ENST00000561954 ACTBL2Q562R1 376 aa11.25□□□□□ -0.61
IFT140-205ENST00000561954 PYHIN1Q6K0P9 492 aa11.25□□□□□ -0.61
IFT140-205ENST00000561954 MOB3BQ86TA1 216 aa11.25□□□□□ -0.61
IFT140-205ENST00000561954 THNSL2Q86YJ6 484 aa11.25□□□□□ -0.61
IFT140-205ENST00000561954 ODF3L1Q8IXM7 274 aa11.25□□□□□ -0.61
IFT140-205ENST00000561954 DRAM1Q8N682 238 aa11.25□□□□□ -0.61
IFT140-205ENST00000561954 GVQW1Q8N7I0 195 aa11.25□□□□□ -0.61
IFT140-205ENST00000561954 OR5AP2Q8NGF4 316 aa11.25□□□□□ -0.61
IFT140-205ENST00000561954 OR4C13Q8NGP0 309 aa11.25□□□□□ -0.61
IFT140-205ENST00000561954 PIFOQ8TCI5 191 aa11.25□□□□□ -0.61
IFT140-205ENST00000561954 CFHR4Q92496 578 aa11.25□□□□□ -0.61
IFT140-205ENST00000561954 SNAPC3Q92966 411 aa11.25□□□□□ -0.61
IFT140-205ENST00000561954 AGMATQ9BSE5 352 aa11.25□□□□□ -0.61
IFT140-205ENST00000561954 PARP12Q9H0J9 701 aaKnown RBP11.25□□□□□ -0.61
IFT140-205ENST00000561954 OR2D2Q9H210 308 aa11.25□□□□□ -0.61
IFT140-205ENST00000561954 FBN1P35555 2871 aaKnown RBP11.24□□□□□ -0.61
IFT140-205ENST00000561954 SLC22A5O76082 557 aa11.24□□□□□ -0.61
IFT140-205ENST00000561954 OR2F2O95006 317 aa11.24□□□□□ -0.61
IFT140-205ENST00000561954 NDUFA7O95182 113 aa11.24□□□□□ -0.61
IFT140-205ENST00000561954 HKR1P10072 659 aa11.24□□□□□ -0.61
IFT140-205ENST00000561954 NAT1P18440 290 aa11.24□□□□□ -0.61
IFT140-205ENST00000561954 CD1BP29016 333 aa11.24□□□□□ -0.61
IFT140-205ENST00000561954 OR3A3P47888 321 aa11.24□□□□□ -0.61
IFT140-205ENST00000561954 RAG2P55895 527 aa11.24□□□□□ -0.61
IFT140-205ENST00000561954 SSBP1Q04837 148 aaKnown RBP11.24□□□□□ -0.61
IFT140-205ENST00000561954 LSAMPQ13449 338 aa11.24□□□□□ -0.61
IFT140-205ENST00000561954 IL18Q14116 193 aa11.24□□□□□ -0.61
IFT140-205ENST00000561954 DIAPH2-AS1Q14236 149 aa11.24□□□□□ -0.61
IFT140-205ENST00000561954 HES1Q14469 280 aa11.24□□□□□ -0.61
IFT140-205ENST00000561954 OR5H2Q8NGV7 314 aa11.24□□□□□ -0.61
IFT140-205ENST00000561954 OR4F5Q8NH21 305 aa11.24□□□□□ -0.61
IFT140-205ENST00000561954 FCAMRQ8WWV6 532 aa11.24□□□□□ -0.61
IFT140-205ENST00000561954 OR2W1Q9Y3N9 320 aa11.24□□□□□ -0.61
IFT140-205ENST00000561954 A0A1B0GUS0 222 aa11.23□□□□□ -0.61
IFT140-205ENST00000561954 OR5H14A6NHG9 310 aa11.23□□□□□ -0.61
IFT140-205ENST00000561954 FAM90A9PA6NNJ1 464 aa11.23□□□□□ -0.61
IFT140-205ENST00000561954 GABARAPH6UMI1 98 aa11.23□□□□□ -0.61
IFT140-205ENST00000561954 IGKV1D-33P01593 117 aa11.23□□□□□ -0.61
IFT140-205ENST00000561954 IGKV1-33P01594 117 aa11.23□□□□□ -0.61
IFT140-205ENST00000561954 SNRNP70P08621 437 aaKnown RBP11.23□□□□□ -0.61
IFT140-205ENST00000561954 OR8U9P0C7N5 309 aa11.23□□□□□ -0.61
IFT140-205ENST00000561954 OR5H8P0DN80 308 aa11.23□□□□□ -0.61
IFT140-205ENST00000561954 TMEM11P17152 192 aa11.23□□□□□ -0.61
IFT140-205ENST00000561954 TBPP20226 339 aa11.23□□□□□ -0.61
IFT140-205ENST00000561954 RAB13P51153 203 aa11.23□□□□□ -0.61
IFT140-205ENST00000561954 LUMP51884 338 aaPredicted RBP11.23□□□□□ -0.61
IFT140-205ENST00000561954 FOXL1Q12952 345 aa11.23□□□□□ -0.61
IFT140-205ENST00000561954 TMEM219Q86XT9 240 aa11.23□□□□□ -0.61
IFT140-205ENST00000561954 OR2T10Q8NGZ9 312 aa11.23□□□□□ -0.61
IFT140-205ENST00000561954 OR8U1Q8NH10 309 aa11.23□□□□□ -0.61
IFT140-205ENST00000561954 BORCS5Q969J3 196 aa11.23□□□□□ -0.61
IFT140-205ENST00000561954 ABHD14BQ96IU4 210 aa11.23□□□□□ -0.61
IFT140-205ENST00000561954 SLC25A33Q9BSK2 321 aa11.23□□□□□ -0.61
IFT140-205ENST00000561954 MRPL20Q9BYC9 149 aaKnown RBP11.23□□□□□ -0.61
IFT140-205ENST00000561954 EHFQ9NZC4 300 aa11.23□□□□□ -0.61
IFT140-205ENST00000561954 MOB4Q9Y3A3 225 aa11.23□□□□□ -0.61
IFT140-205ENST00000561954 TMEM89A2RUT3 159 aa11.22□□□□□ -0.61
IFT140-205ENST00000561954 CTDSPLO15194 276 aa11.22□□□□□ -0.61
IFT140-205ENST00000561954 CHST1O43916 411 aa11.22□□□□□ -0.61
IFT140-205ENST00000561954 TUSC2O75896 110 aa11.22□□□□□ -0.61
IFT140-205ENST00000561954 MOSP00540 346 aa11.22□□□□□ -0.61
IFT140-205ENST00000561954 NFYAP23511 347 aaPredicted RBP11.22□□□□□ -0.61
IFT140-205ENST00000561954 ZNF645Q8N7E2 425 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms