RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 DMDP11532 3685 aa3.17□□□□□ -1.9
SMG1-204ENST00000561940 CRXO43186 299 aaPredicted RBP3.17□□□□□ -1.9
SMG1-204ENST00000561940 SGCEO43556 437 aa3.17□□□□□ -1.9
SMG1-204ENST00000561940 ENTPD6O75354 484 aa3.17□□□□□ -1.9
SMG1-204ENST00000561940 PRTN3P24158 256 aa3.17□□□□□ -1.9
SMG1-204ENST00000561940 MAGEA6P43360 314 aa3.17□□□□□ -1.9
SMG1-204ENST00000561940 PRKCDQ05655 676 aa3.17□□□□□ -1.9
SMG1-204ENST00000561940 PRDX1Q06830 199 aaKnown RBP3.17□□□□□ -1.9
SMG1-204ENST00000561940 BAMBIQ13145 260 aa3.17□□□□□ -1.9
SMG1-204ENST00000561940 OR4D1Q15615 310 aa3.17□□□□□ -1.9
SMG1-204ENST00000561940 MRPL2Q5T653 305 aaKnown RBP3.17□□□□□ -1.9
SMG1-204ENST00000561940 DPPA2Q7Z7J5 298 aa3.17□□□□□ -1.9
SMG1-204ENST00000561940 MRPL52Q86TS9 123 aaKnown RBP3.17□□□□□ -1.9
SMG1-204ENST00000561940 C10orf107Q8IVU9 208 aa3.17□□□□□ -1.9
SMG1-204ENST00000561940 SELENOHQ8IZQ5 122 aaKnown RBP3.17□□□□□ -1.9
SMG1-204ENST00000561940 ZFP82Q8N141 532 aa3.17□□□□□ -1.9
SMG1-204ENST00000561940 OR2V2Q96R30 315 aa3.17□□□□□ -1.9
SMG1-204ENST00000561940 APOL4Q9BPW4 351 aa3.17□□□□□ -1.9
SMG1-204ENST00000561940 SUCNR1Q9BXA5 334 aa3.17□□□□□ -1.9
SMG1-204ENST00000561940 R4GN34 69 aa3.17□□□□□ -1.9
SMG1-204ENST00000561940 NBEAQ8NFP9 2946 aa3.16□□□□□ -1.9
SMG1-204ENST00000561940 TRAV8-3A0A0A6YYJ7 113 aa3.16□□□□□ -1.9
SMG1-204ENST00000561940 PGPA6NDG6 321 aa3.16□□□□□ -1.9
SMG1-204ENST00000561940 GP1BAP07359 652 aa3.16□□□□□ -1.9
SMG1-204ENST00000561940 SLC35E2BP0CK96 405 aa3.16□□□□□ -1.9
SMG1-204ENST00000561940 SCGB1C2P0DMR2 95 aa3.16□□□□□ -1.9
SMG1-204ENST00000561940 PSMB9P28065 219 aa3.16□□□□□ -1.9
SMG1-204ENST00000561940 KLF3P57682 345 aaPredicted RBP3.16□□□□□ -1.9
SMG1-204ENST00000561940 RAB25P57735 213 aa3.16□□□□□ -1.9
SMG1-204ENST00000561940 HBG1P69891 147 aa3.16□□□□□ -1.9
SMG1-204ENST00000561940 HBG2P69892 147 aa3.16□□□□□ -1.9
SMG1-204ENST00000561940 DMTNQ08495 405 aa3.16□□□□□ -1.9
SMG1-204ENST00000561940 ZBTB6Q15916 424 aa3.16□□□□□ -1.9
SMG1-204ENST00000561940 TTMPQ5BVD1 217 aa3.16□□□□□ -1.9
SMG1-204ENST00000561940 OR10J3Q5JRS4 329 aa3.16□□□□□ -1.9
SMG1-204ENST00000561940 NXNL2Q5VZ03 156 aa3.16□□□□□ -1.9
SMG1-204ENST00000561940 ZNF660Q6AZW8 331 aaPredicted RBP3.16□□□□□ -1.9
SMG1-204ENST00000561940 AMN1Q8IY45 258 aa3.16□□□□□ -1.9
SMG1-204ENST00000561940 SCGB1C1Q8TD33 95 aa3.16□□□□□ -1.9
SMG1-204ENST00000561940 YIPF5Q969M3 257 aa3.16□□□□□ -1.9
SMG1-204ENST00000561940 PITX2Q99697 317 aa3.16□□□□□ -1.9
SMG1-204ENST00000561940 ACBD6Q9BR61 282 aa3.16□□□□□ -1.9
SMG1-204ENST00000561940 CD300AQ9UGN4 299 aa3.16□□□□□ -1.9
SMG1-204ENST00000561940 FADS3Q9Y5Q0 445 aa3.16□□□□□ -1.9
SMG1-204ENST00000561940 FBN3Q75N90 2809 aa3.15□□□□□ -1.9
SMG1-204ENST00000561940 ABCA2Q9BZC7 2435 aa3.15□□□□□ -1.9
SMG1-204ENST00000561940 IGHV3-43A0A0B4J1X8 118 aa3.15□□□□□ -1.91
SMG1-204ENST00000561940 GOLGA6L4A6NEF3 574 aa3.15□□□□□ -1.91
SMG1-204ENST00000561940 CD300LBA8K4G0 201 aa3.15□□□□□ -1.91
SMG1-204ENST00000561940 CIAO1O76071 339 aa3.15□□□□□ -1.91
SMG1-204ENST00000561940 TNFAIP8O95379 198 aa3.15□□□□□ -1.91
SMG1-204ENST00000561940 CA2P00918 260 aa3.15□□□□□ -1.91
SMG1-204ENST00000561940 CGB3P0DN86 165 aa3.15□□□□□ -1.91
SMG1-204ENST00000561940 CGB7P0DN87 165 aa3.15□□□□□ -1.91
SMG1-204ENST00000561940 HRES1P13985 223 aa3.15□□□□□ -1.91
SMG1-204ENST00000561940 SYT1P21579 422 aa3.15□□□□□ -1.91
SMG1-204ENST00000561940 S100A2P29034 98 aa3.15□□□□□ -1.91
SMG1-204ENST00000561940 ENDOGQ14249 297 aaKnown RBP3.15□□□□□ -1.91
SMG1-204ENST00000561940 FLOT2Q14254 428 aa3.15□□□□□ -1.91
SMG1-204ENST00000561940 SYCP1Q15431 976 aa3.15□□□□□ -1.91
SMG1-204ENST00000561940 OTUD6BQ8N6M0 293 aa3.15□□□□□ -1.91
SMG1-204ENST00000561940 OR8A1Q8NGG7 326 aa3.15□□□□□ -1.91
SMG1-204ENST00000561940 ANGPTL6Q8NI99 470 aa3.15□□□□□ -1.91
SMG1-204ENST00000561940 ACTL9Q8TC94 416 aa3.15□□□□□ -1.91
SMG1-204ENST00000561940 PHF10Q8WUB8 498 aaKnown RBP3.15□□□□□ -1.91
SMG1-204ENST00000561940 OTUB2Q96DC9 234 aa3.15□□□□□ -1.91
SMG1-204ENST00000561940 PGLYRP3Q96LB9 341 aa3.15□□□□□ -1.91
SMG1-204ENST00000561940 ZNF586Q9NXT0 402 aa3.15□□□□□ -1.91
SMG1-204ENST00000561940 C14orf166Q9Y224 244 aaKnown RBP3.15□□□□□ -1.91
SMG1-204ENST00000561940 BTRCQ9Y297 605 aa3.15□□□□□ -1.91
SMG1-204ENST00000561940 ICOSQ9Y6W8 199 aa3.15□□□□□ -1.91
SMG1-204ENST00000561940 APC2O95996 2303 aa3.15□□□□□ -1.91
SMG1-204ENST00000561940 LOC400499M0QZD8 3231 aa3.15□□□□□ -1.91
SMG1-204ENST00000561940 COL6A6A6NMZ7 2263 aa3.14□□□□□ -1.91
SMG1-204ENST00000561940 TENM4Q6N022 2769 aa3.14□□□□□ -1.91
SMG1-204ENST00000561940 A0A1B0GTI1 187 aa3.14□□□□□ -1.91
SMG1-204ENST00000561940 A0A1W2PNN7 141 aa3.14□□□□□ -1.91
SMG1-204ENST00000561940 GMNCA6NCL1 334 aa3.14□□□□□ -1.91
SMG1-204ENST00000561940 ZNF729A6NN14 1252 aaPredicted RBP3.14□□□□□ -1.91
SMG1-204ENST00000561940 FABP7O15540 132 aa3.14□□□□□ -1.91
SMG1-204ENST00000561940 PDCD6O75340 191 aa3.14□□□□□ -1.91
SMG1-204ENST00000561940 KLHL2O95198 593 aa3.14□□□□□ -1.91
SMG1-204ENST00000561940 HTR4Q13639 388 aa3.14□□□□□ -1.91
SMG1-204ENST00000561940 ZNF235Q14590 738 aa3.14□□□□□ -1.91
SMG1-204ENST00000561940 SLC9A3R2Q15599 337 aa3.14□□□□□ -1.91
SMG1-204ENST00000561940 PDZD11Q5EBL8 140 aa3.14□□□□□ -1.91
SMG1-204ENST00000561940 TMEM215Q68D42 235 aa3.14□□□□□ -1.91
SMG1-204ENST00000561940 SSX7Q7RTT5 188 aa3.14□□□□□ -1.91
SMG1-204ENST00000561940 GTF2H4Q92759 462 aa3.14□□□□□ -1.91
SMG1-204ENST00000561940 MAL2Q969L2 176 aa3.14□□□□□ -1.91
SMG1-204ENST00000561940 LRRC45Q96CN5 670 aa3.14□□□□□ -1.91
SMG1-204ENST00000561940 MED10Q9BTT4 135 aa3.14□□□□□ -1.91
SMG1-204ENST00000561940 TAPBPLQ9BX59 468 aa3.14□□□□□ -1.91
SMG1-204ENST00000561940 TXNIPQ9H3M7 391 aa3.14□□□□□ -1.91
SMG1-204ENST00000561940 DSN1Q9H410 356 aa3.14□□□□□ -1.91
SMG1-204ENST00000561940 NRBP2Q9NSY0 501 aa3.14□□□□□ -1.91
SMG1-204ENST00000561940 AHCTF1Q8WYP5 2266 aa3.14□□□□□ -1.91
SMG1-204ENST00000561940 PCNX1Q96RV3 2341 aa3.14□□□□□ -1.91
SMG1-204ENST00000561940 FBN2P35556 2912 aa3.13□□□□□ -1.91
SMG1-204ENST00000561940 SMG1Q96Q15 3661 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms