RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 A0A0B4J2E0 115 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 IGHV1-69DA0A0B4J2H0 117 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 ZNF816-ZNF321PA0A0X1KG74 233 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 A0A1B0GVI7 797 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 A0A1B0GX12 115 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 A0A1W2PRG6 482 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 PRSS37A4D1T9 235 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 CLDN24A6NM45 220 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 CEACAM18A8MTB9 384 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 KRTAP4-16G5E9R7 235 aaPredicted RBP2.48□□□□□ -2.01
HERC1-215ENST00000561436 RFXANKO14593 260 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 BIRC5O15392 142 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 IGHV1-69P01742 117 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 BGLAPP02818 100 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 CST2P09228 141 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 FBP1P09467 338 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 PGA4P0DJD7 388 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 PGA3P0DJD8 388 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 SLC6A1P30531 599 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 CFHR2P36980 270 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 RBM34P42696 430 aaKnown RBP2.48□□□□□ -2.01
HERC1-215ENST00000561436 CRATP43155 626 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 RORCP51449 518 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 MNAT1P51948 309 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 FGF12P61328 243 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 NCALDP61601 193 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 PPP1CBP62140 327 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 C2orf54Q08AI8 447 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 AQP6Q13520 282 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 SGCAQ16586 387 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 THEM4Q5T1C6 240 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 HHATQ5VTY9 493 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 SLC35D2Q76EJ3 337 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 OAFQ86UD1 273 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 NDUFA11Q86Y39 141 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 C10orf107Q8IVU9 208 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 SLC30A8Q8IWU4 369 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 IFT20Q8IY31 132 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 CLECL1Q8IZS7 167 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 Q8N2B8 174 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 KRTCAP2Q8N6L1 136 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 OR4C5Q8NGB2 326 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 OR4K5Q8NGD3 323 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 OR11L1Q8NGX0 322 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 CLHC1Q8NHS4 586 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 FAM81AQ8TBF8 368 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 RASSF5Q8WWW0 418 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 C22orf15Q8WYQ4 148 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 C12orf43Q96C57 262 aaKnown RBP2.48□□□□□ -2.01
HERC1-215ENST00000561436 RBP7Q96R05 134 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 P2RX4Q99571 388 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 SDHCQ99643 169 aaPredicted RBP2.48□□□□□ -2.01
HERC1-215ENST00000561436 UBAP1Q9NZ09 502 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 KAAG1Q9UBP8 84 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 CLN8Q9UBY8 286 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 VPREB3Q9UKI3 123 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 GOLT1BQ9Y3E0 138 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 SPTBP11277 2137 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 CUBNO60494 3623 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 DOCK10Q96BY6 2186 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 CNTRLQ7Z7A1 2325 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 ANKRD12Q6UB98 2062 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 IGKV1D-42A0A075B6H8 117 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 TRAV38-1A0A0B4J264 116 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 TRAV40A0A0B4J280 105 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 CENPVL3A0A0U1RRI6 287 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 A0A1B0GWA3 101 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 C5orf49A4QMS7 147 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 TRPC5OSA6NMA1 111 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 M0R1W7 72 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 CHP2O43745 196 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 GMDSO60547 372 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 CPSF4O95639 269 aaKnown RBP2.47□□□□□ -2.01
HERC1-215ENST00000561436 CLIC3O95833 236 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 MOSP00540 346 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 TSPAN19P0C672 248 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 ASAH2BP0C7U1 165 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 IGHV3-43DP0DP04 118 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 IDO1P14902 403 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 MUC1P15941 1255 aaPredicted RBP2.47□□□□□ -2.01
HERC1-215ENST00000561436 RCC1P18754 421 aaPredicted RBP2.47□□□□□ -2.01
HERC1-215ENST00000561436 OMGP23515 440 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 ALDH3A1P30838 453 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 OTX1P32242 354 aaPredicted RBP2.47□□□□□ -2.01
HERC1-215ENST00000561436 NAA10P41227 235 aaPredicted RBP2.47□□□□□ -2.01
HERC1-215ENST00000561436 NMUP48645 174 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 MRPL19P49406 292 aaKnown RBP2.47□□□□□ -2.01
HERC1-215ENST00000561436 UBE2AP49459 152 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 RPL14P50914 215 aaKnown RBP2.47□□□□□ -2.01
HERC1-215ENST00000561436 UBE2E1P51965 193 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 RGS8P57771 180 aaPredicted RBP2.47□□□□□ -2.01
HERC1-215ENST00000561436 DSTNP60981 165 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 HERVK_113P61574 105 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 LSM6P62312 80 aaKnown RBP2.47□□□□□ -2.01
HERC1-215ENST00000561436 RAP1AP62834 184 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 ADARB1P78563 741 aaKnown RBP2.47□□□□□ -2.01
HERC1-215ENST00000561436 PSG4Q00888 419 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 BNIP2Q12982 314 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 RGNQ15493 299 aa2.47□□□□□ -2.01
HERC1-215ENST00000561436 SNCBQ16143 134 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms