RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 IL1F10Q8WWZ1 152 aa9.02□□□□□ -0.97
USP3-220ENST00000561381 DCUN1D4Q92564 292 aa9.02□□□□□ -0.97
USP3-220ENST00000561381 GALMQ96C23 342 aa9.02□□□□□ -0.97
USP3-220ENST00000561381 NEDD4LQ96PU5 975 aa9.02□□□□□ -0.97
USP3-220ENST00000561381 NICN1Q9BSH3 213 aa9.02□□□□□ -0.97
USP3-220ENST00000561381 CNOT2Q9NZN8 540 aaKnown RBP9.02□□□□□ -0.97
USP3-220ENST00000561381 EBAG9O00559 213 aa9.01□□□□□ -0.97
USP3-220ENST00000561381 RGS11O94810 467 aa9.01□□□□□ -0.97
USP3-220ENST00000561381 NDUFA3O95167 84 aa9.01□□□□□ -0.97
USP3-220ENST00000561381 MAPK3P27361 379 aaPredicted RBP9.01□□□□□ -0.97
USP3-220ENST00000561381 SLURP1P55000 103 aa9.01□□□□□ -0.97
USP3-220ENST00000561381 RUNX1Q01196 453 aa9.01□□□□□ -0.97
USP3-220ENST00000561381 UNC119Q13432 240 aa9.01□□□□□ -0.97
USP3-220ENST00000561381 ECSCRQ19T08 205 aa9.01□□□□□ -0.97
USP3-220ENST00000561381 ACSM3Q53FZ2 586 aa9.01□□□□□ -0.97
USP3-220ENST00000561381 C19orf54Q5BKX5 351 aa9.01□□□□□ -0.97
USP3-220ENST00000561381 GLDNQ6ZMI3 551 aaPredicted RBP9.01□□□□□ -0.97
USP3-220ENST00000561381 C8orf59Q8N0T1 100 aaPredicted RBP9.01□□□□□ -0.97
USP3-220ENST00000561381 PACRGLQ8N7B6 248 aa9.01□□□□□ -0.97
USP3-220ENST00000561381 CHCHD6Q9BRQ6 235 aa9.01□□□□□ -0.97
USP3-220ENST00000561381 CST11Q9H112 138 aa9.01□□□□□ -0.97
USP3-220ENST00000561381 FBXL15Q9H469 300 aa9.01□□□□□ -0.97
USP3-220ENST00000561381 ISYNA1Q9NPH2 558 aa9.01□□□□□ -0.97
USP3-220ENST00000561381 FKBP14Q9NWM8 211 aa9.01□□□□□ -0.97
USP3-220ENST00000561381 GHRLQ9UBU3 117 aa9.01□□□□□ -0.97
USP3-220ENST00000561381 A3GALT2U3KPV4 340 aa9.01□□□□□ -0.97
USP3-220ENST00000561381 A0A0A6YYD4 124 aa9□□□□□ -0.97
USP3-220ENST00000561381 A0A1W2PN81 502 aa9□□□□□ -0.97
USP3-220ENST00000561381 FCN1O00602 326 aa9□□□□□ -0.97
USP3-220ENST00000561381 NAPSAO96009 420 aa9□□□□□ -0.97
USP3-220ENST00000561381 CT45A6P0DMU7 189 aa9□□□□□ -0.97
USP3-220ENST00000561381 CT45A5P0DMU8 189 aa9□□□□□ -0.97
USP3-220ENST00000561381 CT45A7P0DMV0 189 aa9□□□□□ -0.97
USP3-220ENST00000561381 EGR2P11161 476 aaPredicted RBP9□□□□□ -0.97
USP3-220ENST00000561381 CHRNA7P36544 502 aa9□□□□□ -0.97
USP3-220ENST00000561381 RPS27AP62979 156 aaKnown RBP9□□□□□ -0.97
USP3-220ENST00000561381 CX3CL1P78423 397 aa9□□□□□ -0.97
USP3-220ENST00000561381 GABPB1Q06547 395 aaPredicted RBP9□□□□□ -0.97
USP3-220ENST00000561381 RCN1Q15293 331 aa9□□□□□ -0.97
USP3-220ENST00000561381 LY6G6FQ5SQ64 297 aa9□□□□□ -0.97
USP3-220ENST00000561381 C1orf100Q5SVJ3 147 aa9□□□□□ -0.97
USP3-220ENST00000561381 SETD6Q8TBK2 473 aa9□□□□□ -0.97
USP3-220ENST00000561381 DLX4Q92988 240 aaPredicted RBP9□□□□□ -0.97
USP3-220ENST00000561381 ABHD14BQ96IU4 210 aa9□□□□□ -0.97
USP3-220ENST00000561381 HDHD3Q9BSH5 251 aaPredicted RBP9□□□□□ -0.97
USP3-220ENST00000561381 TMED9Q9BVK6 235 aa9□□□□□ -0.97
USP3-220ENST00000561381 TMEM59Q9BXS4 323 aa9□□□□□ -0.97
USP3-220ENST00000561381 C8orf4Q9NR00 106 aa9□□□□□ -0.97
USP3-220ENST00000561381 PLCXD1Q9NUJ7 323 aa9□□□□□ -0.97
USP3-220ENST00000561381 ABRACLQ9P1F3 81 aa9□□□□□ -0.97
USP3-220ENST00000561381 KIAA1456Q9P272 454 aa9□□□□□ -0.97
USP3-220ENST00000561381 GAB2Q9UQC2 676 aa9□□□□□ -0.97
USP3-220ENST00000561381 ERGIC3Q9Y282 383 aa9□□□□□ -0.97
USP3-220ENST00000561381 H0YJW9 148 aa8.99□□□□□ -0.97
USP3-220ENST00000561381 RRHO14718 337 aa8.99□□□□□ -0.97
USP3-220ENST00000561381 OVOL1O14753 267 aa8.99□□□□□ -0.97
USP3-220ENST00000561381 UBBP0CG47 229 aa8.99□□□□□ -0.97
USP3-220ENST00000561381 INSL3P51460 131 aa8.99□□□□□ -0.97
USP3-220ENST00000561381 CRIP2P52943 208 aaPredicted RBP8.99□□□□□ -0.97
USP3-220ENST00000561381 QRFPP83859 136 aa8.99□□□□□ -0.97
USP3-220ENST00000561381 RBM48Q5RL73 367 aaKnown RBP8.99□□□□□ -0.97
USP3-220ENST00000561381 GLT8D1Q68CQ7 371 aa8.99□□□□□ -0.97
USP3-220ENST00000561381 FAM71F2Q6NXP2 309 aa8.99□□□□□ -0.97
USP3-220ENST00000561381 ZNF880Q6PDB4 577 aa8.99□□□□□ -0.97
USP3-220ENST00000561381 OVCH2Q7RTZ1 564 aa8.99□□□□□ -0.97
USP3-220ENST00000561381 SBSPONQ8IVN8 264 aa8.99□□□□□ -0.97
USP3-220ENST00000561381 Q8N3U1 123 aa8.99□□□□□ -0.97
USP3-220ENST00000561381 THRSPQ92748 146 aa8.99□□□□□ -0.97
USP3-220ENST00000561381 FAM103A1Q9BTL3 118 aaKnown RBP8.99□□□□□ -0.97
USP3-220ENST00000561381 TM2D1Q9BX74 207 aa8.99□□□□□ -0.97
USP3-220ENST00000561381 TOLLIPQ9H0E2 274 aa8.99□□□□□ -0.97
USP3-220ENST00000561381 CHMP1AQ9HD42 196 aaPredicted RBP8.99□□□□□ -0.97
USP3-220ENST00000561381 TPSG1Q9NRR2 321 aa8.99□□□□□ -0.97
USP3-220ENST00000561381 PIPOXQ9P0Z9 390 aa8.99□□□□□ -0.97
USP3-220ENST00000561381 OR1A1Q9P1Q5 309 aa8.99□□□□□ -0.97
USP3-220ENST00000561381 STEAP1Q9UHE8 339 aa8.99□□□□□ -0.97
USP3-220ENST00000561381 SLC23A1Q9UHI7 598 aa8.99□□□□□ -0.97
USP3-220ENST00000561381 FOXA2Q9Y261 457 aaPredicted RBP8.99□□□□□ -0.97
USP3-220ENST00000561381 LRRC42Q9Y546 428 aa8.99□□□□□ -0.97
USP3-220ENST00000561381 SMAD5-AS1Q9Y6J3 95 aa8.99□□□□□ -0.97
USP3-220ENST00000561381 IGHV4OR15-8A0A075B7B6 117 aa8.98□□□□□ -0.97
USP3-220ENST00000561381 A0A087WW49 117 aa8.98□□□□□ -0.97
USP3-220ENST00000561381 TMEM14DPA8MWL7 114 aa8.98□□□□□ -0.97
USP3-220ENST00000561381 RAB29O14966 203 aa8.98□□□□□ -0.97
USP3-220ENST00000561381 SLC22A1O15245 554 aa8.98□□□□□ -0.97
USP3-220ENST00000561381 SOCS1O15524 211 aa8.98□□□□□ -0.97
USP3-220ENST00000561381 SAP30O75446 220 aa8.98□□□□□ -0.97
USP3-220ENST00000561381 IGHV3-11P01762 117 aa8.98□□□□□ -0.97
USP3-220ENST00000561381 CDK1P06493 297 aa8.98□□□□□ -0.97
USP3-220ENST00000561381 SPNP16150 400 aa8.98□□□□□ -0.97
USP3-220ENST00000561381 SRMP19623 302 aa8.98□□□□□ -0.97
USP3-220ENST00000561381 LINC00205P59089 165 aa8.98□□□□□ -0.97
USP3-220ENST00000561381 PLGLAQ15195 96 aa8.98□□□□□ -0.97
USP3-220ENST00000561381 OGFRL1Q5TC84 451 aaPredicted RBP8.98□□□□□ -0.97
USP3-220ENST00000561381 ZNF660Q6AZW8 331 aaPredicted RBP8.98□□□□□ -0.97
USP3-220ENST00000561381 CEACAM19Q7Z692 300 aa8.98□□□□□ -0.97
USP3-220ENST00000561381 ZNF429Q86V71 674 aa8.98□□□□□ -0.97
USP3-220ENST00000561381 DRAXINQ8NBI3 349 aaPredicted RBP8.98□□□□□ -0.97
USP3-220ENST00000561381 KCNG3Q8TAE7 436 aa8.98□□□□□ -0.97
USP3-220ENST00000561381 ABHD5Q8WTS1 349 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms