RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 MAS1P04201 325 aa14.09□□□□□ -0.15
TPM1-226ENST00000560959 CT45A6P0DMU7 189 aa14.09□□□□□ -0.15
TPM1-226ENST00000560959 CT45A5P0DMU8 189 aa14.09□□□□□ -0.15
TPM1-226ENST00000560959 CT45A7P0DMV0 189 aa14.09□□□□□ -0.15
TPM1-226ENST00000560959 FUT3P21217 361 aa14.09□□□□□ -0.15
TPM1-226ENST00000560959 MECP2P51608 486 aaKnown RBP14.09□□□□□ -0.15
TPM1-226ENST00000560959 RIPK1Q13546 671 aa14.09□□□□□ -0.15
TPM1-226ENST00000560959 RNLSQ5VYX0 342 aa14.09□□□□□ -0.15
TPM1-226ENST00000560959 FAM131AQ6UXB0 335 aa14.09□□□□□ -0.15
TPM1-226ENST00000560959 ZNF184Q99676 751 aaPredicted RBP14.09□□□□□ -0.15
TPM1-226ENST00000560959 FAM103A1Q9BTL3 118 aaKnown RBP14.09□□□□□ -0.15
TPM1-226ENST00000560959 RETNQ9HD89 108 aa14.09□□□□□ -0.15
TPM1-226ENST00000560959 GAB2Q9UQC2 676 aa14.09□□□□□ -0.15
TPM1-226ENST00000560959 CSN3P07498 182 aa14.08□□□□□ -0.16
TPM1-226ENST00000560959 GSTP1P09211 210 aaKnown RBP14.08□□□□□ -0.16
TPM1-226ENST00000560959 IGFBP3P17936 291 aaPredicted RBP14.08□□□□□ -0.16
TPM1-226ENST00000560959 GTF2A1P52655 376 aaPredicted RBP14.08□□□□□ -0.16
TPM1-226ENST00000560959 LAX1Q8IWV1 398 aa14.08□□□□□ -0.16
TPM1-226ENST00000560959 OR5AN1Q8NGI8 311 aa14.08□□□□□ -0.16
TPM1-226ENST00000560959 IFI27L2Q9H2X8 130 aa14.08□□□□□ -0.16
TPM1-226ENST00000560959 MRPS18AQ9NVS2 196 aaKnown RBP14.08□□□□□ -0.16
TPM1-226ENST00000560959 H0YJW9 148 aa14.07□□□□□ -0.16
TPM1-226ENST00000560959 SLC22A1O15245 554 aa14.07□□□□□ -0.16
TPM1-226ENST00000560959 GABRB1P18505 474 aa14.07□□□□□ -0.16
TPM1-226ENST00000560959 SYNJ2BPP57105 145 aa14.07□□□□□ -0.16
TPM1-226ENST00000560959 CDH26Q8IXH8 852 aa14.07□□□□□ -0.16
TPM1-226ENST00000560959 POC5Q8NA72 575 aa14.07□□□□□ -0.16
TPM1-226ENST00000560959 MRPL30Q8TCC3 161 aaKnown RBP14.07□□□□□ -0.16
TPM1-226ENST00000560959 GHSRQ92847 366 aa14.07□□□□□ -0.16
TPM1-226ENST00000560959 Q96MT0 163 aa14.07□□□□□ -0.16
TPM1-226ENST00000560959 WASHC3Q9Y3C0 194 aa14.07□□□□□ -0.16
TPM1-226ENST00000560959 ALPLP05186 524 aa14.06□□□□□ -0.16
TPM1-226ENST00000560959 AADACP22760 399 aa14.06□□□□□ -0.16
TPM1-226ENST00000560959 DMKNQ6E0U4 476 aaPredicted RBP14.06□□□□□ -0.16
TPM1-226ENST00000560959 GLIPR1L1Q6UWM5 242 aa14.06□□□□□ -0.16
TPM1-226ENST00000560959 TMEM68Q96MH6 324 aa14.06□□□□□ -0.16
TPM1-226ENST00000560959 OR14A2Q96R54 314 aa14.06□□□□□ -0.16
TPM1-226ENST00000560959 FAM110AQ9BQ89 295 aa14.06□□□□□ -0.16
TPM1-226ENST00000560959 ZNF355PQ9NSJ1 428 aa14.06□□□□□ -0.16
TPM1-226ENST00000560959 METTL1Q9UBP6 276 aaKnown RBP14.06□□□□□ -0.16
TPM1-226ENST00000560959 PEF1Q9UBV8 284 aaKnown RBP14.06□□□□□ -0.16
TPM1-226ENST00000560959 STEAP1Q9UHE8 339 aa14.06□□□□□ -0.16
TPM1-226ENST00000560959 ORC6Q9Y5N6 252 aa14.06□□□□□ -0.16
TPM1-226ENST00000560959 KMT2AQ03164 3969 aa14.06□□□□□ -0.16
TPM1-226ENST00000560959 UBE2QL1A1L167 161 aa14.05□□□□□ -0.16
TPM1-226ENST00000560959 ANKRD34BA5PLL1 514 aa14.05□□□□□ -0.16
TPM1-226ENST00000560959 RBMY1BA6NDE4 496 aaKnown RBP14.05□□□□□ -0.16
TPM1-226ENST00000560959 RBMY1EA6NEQ0 496 aaKnown RBP14.05□□□□□ -0.16
TPM1-226ENST00000560959 ITGB1BP1O14713 200 aa14.05□□□□□ -0.16
TPM1-226ENST00000560959 TPPPO94811 219 aa14.05□□□□□ -0.16
TPM1-226ENST00000560959 SPDEFO95238 335 aa14.05□□□□□ -0.16
TPM1-226ENST00000560959 CNIH1O95406 144 aa14.05□□□□□ -0.16
TPM1-226ENST00000560959 CA2P00918 260 aa14.05□□□□□ -0.16
TPM1-226ENST00000560959 RBMY1DP0C7P1 496 aaKnown RBP14.05□□□□□ -0.16
TPM1-226ENST00000560959 PSG5Q15238 335 aa14.05□□□□□ -0.16
TPM1-226ENST00000560959 HMGN3Q15651 99 aa14.05□□□□□ -0.16
TPM1-226ENST00000560959 C6orf141Q5SZD1 244 aa14.05□□□□□ -0.16
TPM1-226ENST00000560959 SIGIRRQ6IA17 410 aa14.05□□□□□ -0.16
TPM1-226ENST00000560959 ZNF343Q6P1L6 599 aa14.05□□□□□ -0.16
TPM1-226ENST00000560959 Q96M66 194 aa14.05□□□□□ -0.16
TPM1-226ENST00000560959 CLCC1Q96S66 551 aa14.05□□□□□ -0.16
TPM1-226ENST00000560959 SELENOIQ9C0D9 397 aa14.05□□□□□ -0.16
TPM1-226ENST00000560959 CKLFQ9UBR5 152 aa14.05□□□□□ -0.16
TPM1-226ENST00000560959 SLC23A1Q9UHI7 598 aa14.05□□□□□ -0.16
TPM1-226ENST00000560959 IZUMO1RA6ND01 250 aa14.04□□□□□ -0.16
TPM1-226ENST00000560959 H7C2Y5 167 aa14.04□□□□□ -0.16
TPM1-226ENST00000560959 AIREO43918 545 aa14.04□□□□□ -0.16
TPM1-226ENST00000560959 PDCD6O75340 191 aa14.04□□□□□ -0.16
TPM1-226ENST00000560959 OR2A4O95047 310 aa14.04□□□□□ -0.16
TPM1-226ENST00000560959 LIMS3P0CW19 117 aa14.04□□□□□ -0.16
TPM1-226ENST00000560959 LIMS4P0CW20 117 aa14.04□□□□□ -0.16
TPM1-226ENST00000560959 FXYD3Q14802 87 aa14.04□□□□□ -0.16
TPM1-226ENST00000560959 C5orf24Q7Z6I8 188 aa14.04□□□□□ -0.16
TPM1-226ENST00000560959 OR52I1Q8NGK6 324 aa14.04□□□□□ -0.16
TPM1-226ENST00000560959 RHOXF1Q8NHV9 184 aa14.04□□□□□ -0.16
TPM1-226ENST00000560959 USMG5Q96IX5 58 aa14.04□□□□□ -0.16
TPM1-226ENST00000560959 TSNAXQ99598 290 aaKnown RBP14.04□□□□□ -0.16
TPM1-226ENST00000560959 PLEKHA3Q9HB20 300 aa14.04□□□□□ -0.16
TPM1-226ENST00000560959 SLC2A8Q9NY64 477 aa14.04□□□□□ -0.16
TPM1-226ENST00000560959 ABRACLQ9P1F3 81 aa14.04□□□□□ -0.16
TPM1-226ENST00000560959 AASSQ9UDR5 926 aa14.04□□□□□ -0.16
TPM1-226ENST00000560959 RPL36Q9Y3U8 105 aaKnown RBP14.04□□□□□ -0.16
TPM1-226ENST00000560959 TRBV5-5A0A0J9YX44 114 aa14.03□□□□□ -0.16
TPM1-226ENST00000560959 SAC3D1A6NKF1 404 aa14.03□□□□□ -0.16
TPM1-226ENST00000560959 OGG1O15527 345 aa14.03□□□□□ -0.16
TPM1-226ENST00000560959 LY6G6CO95867 125 aa14.03□□□□□ -0.16
TPM1-226ENST00000560959 MGMTP16455 207 aa14.03□□□□□ -0.16
TPM1-226ENST00000560959 CAPGP40121 348 aa14.03□□□□□ -0.16
TPM1-226ENST00000560959 CD81P60033 236 aa14.03□□□□□ -0.16
TPM1-226ENST00000560959 RPL39P5Q59GN2 51 aa14.03□□□□□ -0.16
TPM1-226ENST00000560959 XAF1Q6GPH4 301 aa14.03□□□□□ -0.16
TPM1-226ENST00000560959 GLDNQ6ZMI3 551 aaPredicted RBP14.03□□□□□ -0.16
TPM1-226ENST00000560959 MUL1Q969V5 352 aa14.03□□□□□ -0.16
TPM1-226ENST00000560959 ORAI1Q96D31 301 aa14.03□□□□□ -0.16
TPM1-226ENST00000560959 NEURL2Q9BR09 285 aa14.03□□□□□ -0.16
TPM1-226ENST00000560959 AGMATQ9BSE5 352 aa14.03□□□□□ -0.16
TPM1-226ENST00000560959 BANF2Q9H503 90 aa14.03□□□□□ -0.16
TPM1-226ENST00000560959 AMBNQ9NP70 447 aa14.03□□□□□ -0.16
TPM1-226ENST00000560959 FAM53CQ9NYF3 392 aa14.03□□□□□ -0.16
TPM1-226ENST00000560959 PEMTQ9UBM1 199 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms