RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 RND3P61587 244 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 LMO4P61968 165 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 SRPXP78539 464 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 BAMBIQ13145 260 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 CATR1Q13166 79 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 CBX3Q13185 183 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 Q5PR19 223 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 PRAMEF5Q5TYX0 476 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 KCTD9Q7L273 389 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 LYG2Q86SG7 212 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 FGFRL1Q8N441 504 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 KIR3DL3Q8N743 410 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 ZNF645Q8N7E2 425 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.29□□□□□ -1.56
SPG11-221ENST00000560299 OR13D1Q8NGV5 346 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 OR8U1Q8NH10 309 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 COQ8AQ8NI60 647 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 ZNF431Q8TF32 576 aaPredicted RBP5.29□□□□□ -1.56
SPG11-221ENST00000560299 RTN4IP1Q8WWV3 396 aaPredicted RBP5.29□□□□□ -1.56
SPG11-221ENST00000560299 TNFRSF14Q92956 283 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 C18orf12Q96KH6 178 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 S1PR3Q99500 378 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 PHB2Q99623 299 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 RTBDNQ9BSG5 229 aaPredicted RBP5.29□□□□□ -1.56
SPG11-221ENST00000560299 BEX2Q9BXY8 128 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 MED28Q9H204 178 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 OR51J1Q9H342 316 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 C5orf66Q9H5L9 145 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 METTL8Q9H825 291 aaKnown RBP5.29□□□□□ -1.56
SPG11-221ENST00000560299 BEX1Q9HBH7 125 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 SLC2A9Q9NRM0 540 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 PIPOXQ9P0Z9 390 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 ONECUT1Q9UBC0 465 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 POLR3KQ9Y2Y1 108 aaPredicted RBP5.29□□□□□ -1.56
SPG11-221ENST00000560299 KPTNQ9Y664 436 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 ALG5Q9Y673 324 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 CSPG4Q6UVK1 2322 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 HIVEP2P31629 2446 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 MED13LQ71F56 2210 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 IGHV4-30-2A0A087WSY4 118 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 A0A087X0M5 115 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 A0A096LNT2 108 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 A0A0A6YYJ9 748 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 IGKV1D-13A0A0B4J2D9 117 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 A0A1B0GX30 115 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 C7orf66A4D0T2 115 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 CRYM-AS1A6NIL9 109 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 B4DSR2 109 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 HSD17B6O14756 317 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 MPPED1O15442 326 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 PFDN1O60925 122 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 FCN3O75636 299 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 SFT2D2O95562 160 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 DUS4LO95620 317 aaKnown RBP5.28□□□□□ -1.56
SPG11-221ENST00000560299 IFNA2P01563 188 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 TRAPPC2P0DI81 140 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 TRAPPC2BP0DI82 140 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 IGKV1-13P0DP09 117 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 PI3P19957 117 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 GATA3P23771 443 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 IL3RAP26951 378 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 DLX6P56179 175 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 LCN2P80188 198 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 DHODHQ02127 395 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 DHRS2Q13268 280 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 GNMTQ14749 295 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 PHLDA2Q53GA4 152 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 ZNF626Q68DY1 528 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 LIN54Q6MZP7 749 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 ZNF66Q6ZN08 573 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 ZNF818PQ6ZRF7 136 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 TCF23Q7RTU1 214 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 C5orf24Q7Z6I8 188 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 ABHD12Q8N2K0 398 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 C12orf45Q8N5I9 185 aaPredicted RBP5.28□□□□□ -1.56
SPG11-221ENST00000560299 TCTEX1D1Q8N7M0 179 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 C8orf31Q8N9H6 132 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 UXS1Q8NBZ7 420 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 BVESQ8NE79 360 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 OR10X1Q8NGY0 326 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 OR9G1Q8NH87 305 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 ZNF596Q8TC21 504 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 MRGPRFQ96AM1 343 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 TMEM186Q96B77 213 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 GALNT14Q96FL9 552 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 ADTRPQ96IZ2 230 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 HSD17B10Q99714 261 aaKnown RBP5.28□□□□□ -1.56
SPG11-221ENST00000560299 ABHD14AQ9BUJ0 271 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 SUCNR1Q9BXA5 334 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 FXYD6Q9H0Q3 95 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 OR2D2Q9H210 308 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 TMEM133Q9H2Q1 129 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 NAA60Q9H7X0 242 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 CCL28Q9NRJ3 127 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 LIN7CQ9NUP9 197 aaKnown RBP5.28□□□□□ -1.56
SPG11-221ENST00000560299 TMEM160Q9NX00 188 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 RNF150Q9ULK6 438 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 PSG11Q9UQ72 335 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 GAB2Q9UQC2 676 aa5.28□□□□□ -1.56
SPG11-221ENST00000560299 AMMECR1Q9Y4X0 333 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms